RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CCSAPQ6IQ19 270 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-216ENST00000567071 SLC4A10Q6U841 1118 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 ADHFE1Q8IWW8 467 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 KLHDC4Q8TBB5 520 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 MMP19Q99542 508 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 SEZ6LQ9BYH1 1024 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 TANGO6Q9C0B7 1094 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 DIS3Q9Y2L1 958 aaKnown RBP11.94□□□□□ -0.5
CAPN3-216ENST00000567071 SIPA1L1O43166 1804 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 PDS5AQ29RF7 1337 aaKnown RBP11.93□□□□□ -0.5
CAPN3-216ENST00000567071 ATRXP46100 2492 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 APAF1O14727 1248 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 SLC25A27O95847 323 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 PLCG2P16885 1265 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 TTLL4Q14679 1199 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 KCTD2Q14681 263 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 RAB3GAP1Q15042 981 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 SHROOM1Q2M3G4 852 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-216ENST00000567071 POTEHQ6S545 545 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 HERC6Q8IVU3 1022 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 EDAQ92838 391 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 CDCA7LQ96GN5 454 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 KAZALD1Q96I82 304 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 NOC4LQ9BVI4 516 aaKnown RBP11.93□□□□□ -0.5
CAPN3-216ENST00000567071 CEP126Q9P2H0 1117 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 ZHX1Q9UKY1 873 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-216ENST00000567071 GVINP1Q7Z2Y8 2422 aa11.93□□□□□ -0.5
CAPN3-216ENST00000567071 DCHS1Q96JQ0 3298 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 MYADML2A6NDP7 307 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 TMEM221A6NGB7 291 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 M0R296 226 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 CABYRO75952 493 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 IRS1P35568 1242 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 EP400NLQ6ZTU2 488 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 FBXL6Q8N531 539 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 DNAJC18Q9H819 358 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 MUTYHQ9UIF7 546 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 TRPC6Q9Y210 931 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 ACACBO00763 2458 aa11.92□□□□□ -0.5
CAPN3-216ENST00000567071 NCOR2Q9Y618 2525 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 SOWAHBA6NEL2 793 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 PROB1E7EW31 1015 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 H3BQ06 376 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-216ENST00000567071 BAG3O95817 575 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 PGK2P07205 417 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 NBPF7P0C2Y1 421 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-216ENST00000567071 KCNJ6P48051 423 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 RASGRF1Q13972 1273 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 NBPF20Q3BBV1 942 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 CCDC102BQ68D86 513 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 DEFB128Q7Z7B8 93 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 METTL16Q86W50 562 aaKnown RBP11.91□□□□□ -0.5
CAPN3-216ENST00000567071 MSL3Q8N5Y2 521 aaKnown RBP11.91□□□□□ -0.5
CAPN3-216ENST00000567071 NEK9Q8TD19 979 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 SCLYQ96I15 445 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 ZBED2Q9BTP6 218 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 SIL1Q9H173 461 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 WNT8AQ9H1J5 351 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 CABP5Q9NP86 173 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 CTNNA3Q9UI47 895 aa11.91□□□□□ -0.5
CAPN3-216ENST00000567071 GJA9P57773 515 aa11.9□□□□□ -0.5
CAPN3-216ENST00000567071 TRIM67Q6ZTA4 783 aa11.9□□□□□ -0.5
CAPN3-216ENST00000567071 ASCL5Q7RTU5 278 aa11.9□□□□□ -0.5
CAPN3-216ENST00000567071 ANKRD44Q8N8A2 993 aa11.9□□□□□ -0.5
CAPN3-216ENST00000567071 SH3RF3Q8TEJ3 882 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-216ENST00000567071 RAI14Q9P0K7 980 aa11.9□□□□□ -0.5
CAPN3-216ENST00000567071 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-216ENST00000567071 PLXNA3P51805 1871 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 KMT2EQ8IZD2 1858 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 PRR23AA6NEV1 266 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 ARHGEF15O94989 841 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 RFC2P35250 354 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 ITGA7Q13683 1181 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 ZNF792Q3KQV3 632 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 MAPKAPK5Q8IW41 473 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 TGFBRAP1Q8WUH2 860 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
CAPN3-216ENST00000567071 CRBNQ96SW2 442 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 FTOQ9C0B1 505 aaKnown RBP eCLIP11.89□□□□□ -0.51
CAPN3-216ENST00000567071 UPF3AQ9H1J1 476 aaKnown RBP11.89□□□□□ -0.51
CAPN3-216ENST00000567071 MTUS1Q9ULD2 1270 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 PALD1Q9ULE6 856 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 CHD6Q8TD26 2715 aa11.89□□□□□ -0.51
CAPN3-216ENST00000567071 ZEB2O60315 1214 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 KDM4AO75164 1064 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 FLOT1O75955 427 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 SUPT20HL2P0C7V6 817 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 COPB2P35606 906 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 PTPROQ16827 1216 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 ABCB5Q2M3G0 1257 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 TIGD5Q53EQ6 642 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 DGLUCYQ7Z3D6 616 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 RNF135Q8IUD6 432 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 SLC43A3Q8NBI5 491 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 ACER1Q8TDN7 264 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 NSUN4Q96CB9 384 aaKnown RBP11.88□□□□□ -0.51
CAPN3-216ENST00000567071 FSD1Q9BTV5 496 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 TRPV6Q9H1D0 765 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms