RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 AK8Q96MA6 479 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 DBNDD2Q9BQY9 259 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 MTA3Q9BTC8 594 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 CAPS2Q9BXY5 557 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 NIP7Q9Y221 180 aaKnown RBP eCLIP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 RPAP1Q9BWH6 1393 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 ATP2C2O75185 946 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 CNGA1P29973 690 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 CCT6AP40227 531 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 TNNI2P48788 182 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 NCBP1Q09161 790 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 MTX1Q13505 466 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 UBE3CQ15386 1083 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 DENND2CQ68D51 928 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 G2E3Q7L622 706 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 C2CD5Q86YS7 1000 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 CCDC170Q8IYT3 715 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 PAIP2Q9BPZ3 127 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 TACO1Q9BSH4 297 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 USP44Q9H0E7 712 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 ACTR5Q9H9F9 607 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 LRWD1Q9UFC0 647 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 NCAPD2Q15021 1401 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 PNMA6EA0A0J9YXQ4 647 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 H0YCG3 227 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 NPM3O75607 178 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 PCK1P35558 622 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 CLNS1AP54105 237 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 EPHB4P54760 987 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 PLCB3Q01970 1234 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 MED1Q15648 1581 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 ZNF174Q15697 407 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 RC3H1Q5TC82 1133 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 ALS2CLQ60I27 953 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 PEX26Q7Z412 305 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 VSIG1Q86XK7 387 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 RAB11FIP4Q86YS3 637 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 SLC17A8Q8NDX2 589 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 OTUD7AQ8TE49 926 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 RUBCNQ92622 972 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 DHTKD1Q96HY7 919 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 PLEKHF1Q96S99 279 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 LSG1Q9H089 658 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 ATP8A2Q9NTI2 1148 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 AMFRQ9UKV5 643 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 MED23Q9ULK4 1368 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 B4E1Z4 1266 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 RPS6KA4O75676 772 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 EEF2P13639 858 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 KCNJ6P48051 423 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 YWHAEP62258 255 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 HSP90AA4PQ58FG1 418 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 CFAP157Q5JU67 520 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 OGFOD1Q8N543 542 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 RNF10Q8N5U6 811 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 NFATC2IPQ8NCF5 419 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 RAB3IL1Q8TBN0 382 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 ENOX1Q8TC92 643 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 TBC1D22AQ8WUA7 517 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 FAM227BQ96M60 508 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 BPIFA3Q9BQP9 254 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 TUBB6Q9BUF5 446 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 CNOT10Q9H9A5 744 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 FAM114A2Q9NRY5 505 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 FAM169AQ9Y6X4 670 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 ADCY9O60503 1353 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 IQCA1LA6NCM1 817 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 EIF3CLB5ME19 914 aaKnown RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 KCNJ18B7U540 433 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 TROVE2P10155 538 aaKnown RBP eCLIP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 ABCD1P33897 745 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 SARNPP82979 210 aaKnown RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 LMNB2Q03252 620 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 KCNJ12Q14500 433 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 SEPT2Q15019 361 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 CEP85LQ5SZL2 805 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 RTKN2Q8IZC4 609 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 MCUR1Q96AQ8 359 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 PDLIM2Q96JY6 352 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 PANX2Q96RD6 677 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 USP28Q96RU2 1077 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 EIF3CQ99613 913 aaKnown RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 SPZ1Q9BXG8 430 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 MIS12Q9H081 205 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 TMOD4Q9NZQ9 345 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 KLHL14Q9P2G3 628 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 EPN1Q9Y6I3 576 aaPredicted RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 ATRNO75882 1429 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 PPLO60437 1756 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 WDR19Q8NEZ3 1342 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 IGSF3O75054 1194 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 HIP1RO75146 1068 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 STK10O94804 968 aaKnown RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 KCNA4P22459 653 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 ADCY7P51828 1080 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 GLE1Q53GS7 698 aaKnown RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 RNF26Q9BY78 433 aaPredicted RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 ALDH8A1Q9H2A2 487 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms