RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ALX1Q15699 326 aa23.93■■□□□ 1.42
CLN6-207ENST00000566347 LRRC26Q2I0M4 334 aa23.93■■□□□ 1.42
CLN6-207ENST00000566347 ZNF792Q3KQV3 632 aa23.93■■□□□ 1.42
CLN6-207ENST00000566347 MCMDC2Q4G0Z9 681 aa23.93■■□□□ 1.42
CLN6-207ENST00000566347 KIFC2Q96AC6 838 aa23.93■■□□□ 1.42
CLN6-207ENST00000566347 GDF15Q99988 308 aa23.93■■□□□ 1.42
CLN6-207ENST00000566347 SENP6Q9GZR1 1112 aaPredicted RBP23.93■■□□□ 1.42
CLN6-207ENST00000566347 SLC38A10Q9HBR0 1119 aa23.93■■□□□ 1.42
CLN6-207ENST00000566347 TSPY2A6NKD2 308 aa23.92■■□□□ 1.42
CLN6-207ENST00000566347 FDX1P10109 184 aa23.92■■□□□ 1.42
CLN6-207ENST00000566347 BMP8BP34820 402 aa23.92■■□□□ 1.42
CLN6-207ENST00000566347 CTDSPL2Q05D32 466 aa23.92■■□□□ 1.42
CLN6-207ENST00000566347 VPS53Q5VIR6 699 aa23.92■■□□□ 1.42
CLN6-207ENST00000566347 TINF2Q9BSI4 451 aa23.92■■□□□ 1.42
CLN6-207ENST00000566347 TRIM6-TRIM34B2RNG4 842 aa23.91■■□□□ 1.42
CLN6-207ENST00000566347 SYN1P17600 705 aa23.91■■□□□ 1.42
CLN6-207ENST00000566347 OAZ1P54368 228 aa23.91■■□□□ 1.42
CLN6-207ENST00000566347 PRAMEF19Q5SWL8 479 aa23.91■■□□□ 1.42
CLN6-207ENST00000566347 CPXCR1Q8N123 301 aa23.91■■□□□ 1.42
CLN6-207ENST00000566347 GMCL1Q96IK5 515 aa23.91■■□□□ 1.42
CLN6-207ENST00000566347 FAM227BQ96M60 508 aa23.91■■□□□ 1.42
CLN6-207ENST00000566347 A0A0D9SFI3 127 aa23.9■■□□□ 1.42
CLN6-207ENST00000566347 KBTBD13C9JR72 458 aa23.9■■□□□ 1.42
CLN6-207ENST00000566347 B4GALNT3Q6L9W6 998 aa23.9■■□□□ 1.42
CLN6-207ENST00000566347 CHD1LQ86WJ1 897 aa23.9■■□□□ 1.42
CLN6-207ENST00000566347 MSL3Q8N5Y2 521 aaKnown RBP23.9■■□□□ 1.42
CLN6-207ENST00000566347 DDX11Q96FC9 970 aa23.9■■□□□ 1.42
CLN6-207ENST00000566347 STX8Q9UNK0 236 aa23.9■■□□□ 1.42
CLN6-207ENST00000566347 DNAH12Q6ZR08 3092 aa23.9■■□□□ 1.42
CLN6-207ENST00000566347 ORC4O43929 436 aa23.89■■□□□ 1.41
CLN6-207ENST00000566347 SLC1A4P43007 532 aa23.89■■□□□ 1.41
CLN6-207ENST00000566347 STAT2P52630 851 aa23.89■■□□□ 1.41
CLN6-207ENST00000566347 GJC2Q5T442 439 aaPredicted RBP23.89■■□□□ 1.41
CLN6-207ENST00000566347 ANO1Q5XXA6 986 aa23.89■■□□□ 1.41
CLN6-207ENST00000566347 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.89■■□□□ 1.41
CLN6-207ENST00000566347 FAM160B2Q86V87 743 aa23.89■■□□□ 1.41
CLN6-207ENST00000566347 CHURC1Q8WUH1 139 aa23.89■■□□□ 1.41
CLN6-207ENST00000566347 RAVER2Q9HCJ3 691 aaKnown RBP23.89■■□□□ 1.41
CLN6-207ENST00000566347 FBXO40Q9UH90 709 aa23.89■■□□□ 1.41
CLN6-207ENST00000566347 ISY1Q9ULR0 285 aaKnown RBP23.89■■□□□ 1.41
CLN6-207ENST00000566347 RIPK3Q9Y572 518 aa23.89■■□□□ 1.41
CLN6-207ENST00000566347 ZMYM6O95789 1325 aa23.88■■□□□ 1.41
CLN6-207ENST00000566347 TMEM232C9JQI7 657 aa23.88■■□□□ 1.41
CLN6-207ENST00000566347 RANBP6O60518 1105 aaKnown RBP23.88■■□□□ 1.41
CLN6-207ENST00000566347 MAGEA10P43363 369 aaPredicted RBP23.88■■□□□ 1.41
CLN6-207ENST00000566347 SLC4A3P48751 1232 aa23.88■■□□□ 1.41
CLN6-207ENST00000566347 NUCB1Q02818 461 aa23.88■■□□□ 1.41
CLN6-207ENST00000566347 CHST13Q8NET6 341 aa23.88■■□□□ 1.41
CLN6-207ENST00000566347 EXOC6Q8TAG9 804 aa23.88■■□□□ 1.41
CLN6-207ENST00000566347 RILPL2Q969X0 211 aa23.88■■□□□ 1.41
CLN6-207ENST00000566347 IL17RBQ9NRM6 502 aa23.88■■□□□ 1.41
CLN6-207ENST00000566347 CNPY2Q9Y2B0 182 aa23.88■■□□□ 1.41
CLN6-207ENST00000566347 DNAJC25-GNG10A0A024R161 153 aa23.87■■□□□ 1.41
CLN6-207ENST00000566347 FGAP02671 866 aa23.87■■□□□ 1.41
CLN6-207ENST00000566347 FGRP09769 529 aa23.87■■□□□ 1.41
CLN6-207ENST00000566347 HSPD1P10809 573 aaKnown RBP23.87■■□□□ 1.41
CLN6-207ENST00000566347 RARBP10826 455 aa23.87■■□□□ 1.41
CLN6-207ENST00000566347 NMIQ13287 307 aaPredicted RBP23.87■■□□□ 1.41
CLN6-207ENST00000566347 STAG1Q8WVM7 1258 aa23.87■■□□□ 1.41
CLN6-207ENST00000566347 OSBPL3Q9H4L5 887 aa23.87■■□□□ 1.41
CLN6-207ENST00000566347 INCENPQ9NQS7 918 aa23.87■■□□□ 1.41
CLN6-207ENST00000566347 CCDC171Q6TFL3 1326 aa23.86■■□□□ 1.41
CLN6-207ENST00000566347 SYNGAP1Q96PV0 1343 aa23.86■■□□□ 1.41
CLN6-207ENST00000566347 SMCHD1A6NHR9 2005 aa23.86■■□□□ 1.41
CLN6-207ENST00000566347 PLA2G6O60733 806 aa23.86■■□□□ 1.41
CLN6-207ENST00000566347 IGHDP01880 384 aa23.86■■□□□ 1.41
CLN6-207ENST00000566347 MCCP23508 829 aa23.86■■□□□ 1.41
CLN6-207ENST00000566347 ATN1P54259 1190 aaPredicted RBP23.86■■□□□ 1.41
CLN6-207ENST00000566347 MFAP1P55081 439 aaKnown RBP23.86■■□□□ 1.41
CLN6-207ENST00000566347 IKQ13123 557 aaPredicted RBP23.86■■□□□ 1.41
CLN6-207ENST00000566347 LRRC41Q15345 812 aa23.86■■□□□ 1.41
CLN6-207ENST00000566347 ZNF467Q7Z7K2 595 aaPredicted RBP23.86■■□□□ 1.41
CLN6-207ENST00000566347 PLEKHM2Q8IWE5 1019 aa23.86■■□□□ 1.41
CLN6-207ENST00000566347 ANKRD35Q8N283 1001 aa23.86■■□□□ 1.41
CLN6-207ENST00000566347 NMT2O60551 498 aa23.85■■□□□ 1.41
CLN6-207ENST00000566347 MYCNP04198 464 aaPredicted RBP23.85■■□□□ 1.41
CLN6-207ENST00000566347 AKR1A1P14550 325 aa23.85■■□□□ 1.41
CLN6-207ENST00000566347 NOVP48745 357 aa23.85■■□□□ 1.41
CLN6-207ENST00000566347 MAMDC4Q6UXC1 1216 aa23.85■■□□□ 1.41
CLN6-207ENST00000566347 ZNF589Q86UQ0 364 aaPredicted RBP23.85■■□□□ 1.41
CLN6-207ENST00000566347 XPNPEP3Q9NQH7 507 aa23.85■■□□□ 1.41
CLN6-207ENST00000566347 TOMM22Q9NS69 142 aa23.85■■□□□ 1.41
CLN6-207ENST00000566347 TACC3Q9Y6A5 838 aa23.85■■□□□ 1.41
CLN6-207ENST00000566347 SZT2Q5T011 3432 aa23.84■■□□□ 1.41
CLN6-207ENST00000566347 ZNF865P0CJ78 1059 aaPredicted RBP23.84■■□□□ 1.41
CLN6-207ENST00000566347 SDSP20132 328 aa23.84■■□□□ 1.41
CLN6-207ENST00000566347 RCSD1Q6JBY9 416 aa23.84■■□□□ 1.41
CLN6-207ENST00000566347 PCP11498 1178 aaKnown RBP23.83■■□□□ 1.41
CLN6-207ENST00000566347 TAL1P17542 331 aaPredicted RBP23.83■■□□□ 1.41
CLN6-207ENST00000566347 RTP1P59025 263 aa23.83■■□□□ 1.41
CLN6-207ENST00000566347 SLC39A5Q6ZMH5 540 aa23.83■■□□□ 1.41
CLN6-207ENST00000566347 RNF180Q86T96 592 aa23.83■■□□□ 1.41
CLN6-207ENST00000566347 UBE2OQ9C0C9 1292 aaKnown RBP23.83■■□□□ 1.41
CLN6-207ENST00000566347 ACAD9Q9H845 621 aa23.83■■□□□ 1.41
CLN6-207ENST00000566347 PRKAG2Q9UGJ0 569 aa23.83■■□□□ 1.41
CLN6-207ENST00000566347 ADCYAP1R1P41586 468 aa23.82■■□□□ 1.4
CLN6-207ENST00000566347 TKFCQ3LXA3 575 aa23.82■■□□□ 1.4
CLN6-207ENST00000566347 RRP12Q5JTH9 1297 aaKnown RBP23.82■■□□□ 1.4
CLN6-207ENST00000566347 KCTD1Q719H9 257 aa23.82■■□□□ 1.4
CLN6-207ENST00000566347 TDHQ8IZJ6 230 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms