RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 HMGCRP04035 888 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 INHAP05111 366 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 FDX1P10109 184 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 STAT2P52630 851 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 MLLT1Q03111 559 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 GRB14Q14449 540 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 NECTIN1Q15223 517 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 STOX1Q6ZVD7 989 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 FAM160B2Q86V87 743 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 NCAPG2Q86XI2 1143 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 RIOX2Q8IUF8 465 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 DCAF4Q8WV16 495 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 ZKSCAN3Q9BRR0 538 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 ZNF214Q9UL59 606 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 ISY1Q9ULR0 285 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 CTDP1Q9Y5B0 961 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 ZNF236Q9UL36 1845 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 BRCA2P51587 3418 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 E7EWF7 191 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 SLC27A2O14975 620 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 CCL5P13501 91 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 COPB2P35606 906 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 TRDNQ13061 729 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 CREB3L3Q68CJ9 461 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 KCTD1Q719H9 257 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 TRIB2Q92519 343 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 CHMP4CQ96CF2 233 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 APBA2Q99767 749 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 RNF208Q9H0X6 261 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
HERPUD1-210ENST00000565966 MYH6P13533 1939 aa16.24■□□□□ 0.19
HERPUD1-210ENST00000565966 ATP2A1O14983 1001 aa16.24■□□□□ 0.19
HERPUD1-210ENST00000565966 HOXC6P09630 235 aa16.24■□□□□ 0.19
HERPUD1-210ENST00000565966 IKQ13123 557 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-210ENST00000565966 CYB5R4Q7L1T6 521 aa16.24■□□□□ 0.19
HERPUD1-210ENST00000565966 DPP9Q86TI2 863 aa16.24■□□□□ 0.19
HERPUD1-210ENST00000565966 ABRAQ8N0Z2 381 aa16.24■□□□□ 0.19
HERPUD1-210ENST00000565966 ANKS1AQ92625 1134 aa16.24■□□□□ 0.19
HERPUD1-210ENST00000565966 ZSCAN10Q96SZ4 725 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-210ENST00000565966 TEX13BQ9BXU2 312 aa16.24■□□□□ 0.19
HERPUD1-210ENST00000565966 GJB1P08034 283 aa16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 FCER1AP12319 257 aa16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 ZKSCAN1P17029 563 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 EN2P19622 333 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 ADORA2AP29274 412 aa16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 OAZ1P54368 228 aa16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 CCDC96Q2M329 555 aa16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 SNRNP48Q6IEG0 339 aaKnown RBP16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 CPXCR1Q8N123 301 aa16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 NCOA7Q8NI08 942 aa16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 UNC93B1Q9H1C4 597 aa16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 SLC5A4Q9NY91 659 aa16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 PDE4DIPQ5VU43 2346 aa16.23■□□□□ 0.19
HERPUD1-210ENST00000565966 TNKSO95271 1327 aa16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 RPTORQ8N122 1335 aa16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 PDHBP11177 359 aa16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 CCL14Q16627 93 aa16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 BTNL9Q6UXG8 535 aa16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 RASGRP2Q7LDG7 609 aa16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 RALYLQ86SE5 291 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 ENAHQ8N8S7 591 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 NPLOC4Q8TAT6 608 aa16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 UBAC1Q9BSL1 405 aa16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 KAT14Q9H8E8 782 aa16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 RAVER2Q9HCJ3 691 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 HMX1Q9NP08 348 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 PRR12Q9ULL5 1215 aa16.22■□□□□ 0.19
HERPUD1-210ENST00000565966 SNHG28P0DPA3 235 aa16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 GJA8P48165 433 aa16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 SLC4A3P48751 1232 aa16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 TRIM32Q13049 653 aa16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 KCTD2Q14681 263 aa16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 SEC23AQ15436 765 aa16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 TTBK2Q6IQ55 1244 aa16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 MB21D2Q8IYB1 491 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 PNMA1Q8ND90 353 aa16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 MMP19Q99542 508 aa16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 PAK6Q9NQU5 681 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 RIPK3Q9Y572 518 aa16.21■□□□□ 0.19
HERPUD1-210ENST00000565966 FRMPD2Q68DX3 1309 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 COBLO75128 1261 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 REC8O95072 547 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 SGPL1O95470 568 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 CAPN2P17655 700 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 ANTXR2P58335 489 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 GPATCH4Q5T3I0 446 aaKnown RBP16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 MAP3K21Q5TCX8 1036 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 RNF20Q5VTR2 975 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 MFSD14CQ5VZR4 134 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 CHST13Q8NET6 341 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.188e-7■■■■□ 22.8
HERPUD1-210ENST00000565966 GPCPD1Q9NPB8 672 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 FLRT1Q9NZU1 646 aa16.2■□□□□ 0.18
HERPUD1-210ENST00000565966 PRKAR2AP13861 404 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 SLC16A2P36021 539 aa16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 CACNB2Q08289 660 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 ZNF543Q08ER8 600 aa16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 COL9A3Q14050 684 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 TSGA10IPQ3SY00 556 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms