RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 ANKRD13AQ8IZ07 590 aa22.07■■□□□ 1.12
CSPG4P13-201ENST00000565545 SPZ1Q9BXG8 430 aa22.07■■□□□ 1.12
CSPG4P13-201ENST00000565545 SH2D4AQ9H788 454 aa22.07■■□□□ 1.12
CSPG4P13-201ENST00000565545 USP17L5A8MUK1 530 aa22.06■■□□□ 1.12
CSPG4P13-201ENST00000565545 KLRF2D3W0D1 207 aa22.06■■□□□ 1.12
CSPG4P13-201ENST00000565545 PPFIA3O75145 1194 aa22.06■■□□□ 1.12
CSPG4P13-201ENST00000565545 XBP1P17861 261 aa22.06■■□□□ 1.12
CSPG4P13-201ENST00000565545 CMTR1Q8N1G2 835 aaKnown RBP22.06■■□□□ 1.12
CSPG4P13-201ENST00000565545 STAG2Q8N3U4 1231 aa22.06■■□□□ 1.12
CSPG4P13-201ENST00000565545 CCDC82Q8N4S0 544 aa22.06■■□□□ 1.12
CSPG4P13-201ENST00000565545 V9GY48 417 aaPredicted RBP22.06■■□□□ 1.12
CSPG4P13-201ENST00000565545 BAG4O95429 457 aaKnown RBP22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 ZNF543Q08ER8 600 aa22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 CRHR2Q13324 411 aa22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 NFKBIBQ15653 356 aa22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 SHROOM1Q2M3G4 852 aaPredicted RBP22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 FOXD4L5Q5VV16 416 aaPredicted RBP22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 USP17L2Q6R6M4 530 aa22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 FAM177A1Q8N128 213 aaPredicted RBP22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 FOXD4L4Q8WXT5 416 aaPredicted RBP22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 TMX2Q9Y320 296 aa22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 DOCK1Q14185 1865 aa22.05■■□□□ 1.12
CSPG4P13-201ENST00000565545 SSC5DA1L4H1 1573 aa22.04■■□□□ 1.12
CSPG4P13-201ENST00000565545 GOLGA6L22H0YM25 854 aa22.04■■□□□ 1.12
CSPG4P13-201ENST00000565545 PTMSP20962 102 aa22.04■■□□□ 1.12
CSPG4P13-201ENST00000565545 SLFN13Q68D06 897 aa22.04■■□□□ 1.12
CSPG4P13-201ENST00000565545 CD99L2Q8TCZ2 262 aa22.04■■□□□ 1.12
CSPG4P13-201ENST00000565545 ELP3Q9H9T3 547 aa22.04■■□□□ 1.12
CSPG4P13-201ENST00000565545 GOPCQ9HD26 462 aa22.04■■□□□ 1.12
CSPG4P13-201ENST00000565545 MTMR7Q9Y216 660 aa22.04■■□□□ 1.12
CSPG4P13-201ENST00000565545 PTPN22Q9Y2R2 807 aa22.04■■□□□ 1.12
CSPG4P13-201ENST00000565545 F5H6K3 240 aa22.03■■□□□ 1.12
CSPG4P13-201ENST00000565545 GJA5P36382 358 aa22.03■■□□□ 1.12
CSPG4P13-201ENST00000565545 KLRC3Q07444 240 aa22.03■■□□□ 1.12
CSPG4P13-201ENST00000565545 PKN1Q16512 942 aa22.03■■□□□ 1.12
CSPG4P13-201ENST00000565545 PFKFB3Q16875 520 aaPredicted RBP22.03■■□□□ 1.12
CSPG4P13-201ENST00000565545 GMCL1Q96IK5 515 aa22.03■■□□□ 1.12
CSPG4P13-201ENST00000565545 EFCC1Q9HA90 598 aa22.03■■□□□ 1.12
CSPG4P13-201ENST00000565545 POTEFA5A3E0 1075 aa22.02■■□□□ 1.12
CSPG4P13-201ENST00000565545 DDX11L8A8MPP1 907 aa22.02■■□□□ 1.12
CSPG4P13-201ENST00000565545 MCM4P33991 863 aa22.02■■□□□ 1.12
CSPG4P13-201ENST00000565545 SP3Q02447 781 aa22.02■■□□□ 1.12
CSPG4P13-201ENST00000565545 RESTQ13127 1097 aa22.02■■□□□ 1.12
CSPG4P13-201ENST00000565545 KRT40Q6A162 431 aa22.02■■□□□ 1.12
CSPG4P13-201ENST00000565545 OPTNQ96CV9 577 aa22.02■■□□□ 1.12
CSPG4P13-201ENST00000565545 RIOX1Q9H6W3 641 aa22.02■■□□□ 1.12
CSPG4P13-201ENST00000565545 SH3GLB2Q9NR46 395 aa22.02■■□□□ 1.12
CSPG4P13-201ENST00000565545 GOLGA8HP0CJ92 632 aa22.01■■□□□ 1.11
CSPG4P13-201ENST00000565545 SCG2P13521 617 aa22.01■■□□□ 1.11
CSPG4P13-201ENST00000565545 SLC1A4P43007 532 aa22.01■■□□□ 1.11
CSPG4P13-201ENST00000565545 SAFBQ15424 915 aaKnown RBP eCLIP22.01■■□□□ 1.11
CSPG4P13-201ENST00000565545 CCDC96Q2M329 555 aa22.01■■□□□ 1.11
CSPG4P13-201ENST00000565545 SCYL3Q8IZE3 742 aa22.01■■□□□ 1.11
CSPG4P13-201ENST00000565545 RRP36Q96EU6 259 aaKnown RBP22.01■■□□□ 1.11
CSPG4P13-201ENST00000565545 AIFM3Q96NN9 605 aa22.01■■□□□ 1.11
CSPG4P13-201ENST00000565545 PTPN18Q99952 460 aa22.01■■□□□ 1.11
CSPG4P13-201ENST00000565545 A0A1W2PRG0 241 aa22■■□□□ 1.11
CSPG4P13-201ENST00000565545 TESPA1A2RU30 521 aaPredicted RBP22■■□□□ 1.11
CSPG4P13-201ENST00000565545 CYTH3O43739 400 aa22■■□□□ 1.11
CSPG4P13-201ENST00000565545 FOSBP53539 338 aa22■■□□□ 1.11
CSPG4P13-201ENST00000565545 NOL9Q5SY16 702 aaKnown RBP22■■□□□ 1.11
CSPG4P13-201ENST00000565545 ATL3Q6DD88 541 aa22■■□□□ 1.11
CSPG4P13-201ENST00000565545 MCTP1Q6DN14 999 aa22■■□□□ 1.11
CSPG4P13-201ENST00000565545 BRAPQ7Z569 592 aa22■■□□□ 1.11
CSPG4P13-201ENST00000565545 FERMT3Q86UX7 667 aa22■■□□□ 1.11
CSPG4P13-201ENST00000565545 AS3MTQ9HBK9 375 aa22■■□□□ 1.11
CSPG4P13-201ENST00000565545 BAZ2BQ9UIF8 2168 aaKnown RBP21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 hCG_1984214I3L0E3 225 aa21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 NDUFB10O96000 172 aa21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 INPP5BP32019 993 aa21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 GUCY1B3Q02153 619 aa21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 ZNF713Q8N859 430 aaPredicted RBP21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 WRNIP1Q96S55 665 aa21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 VCPKMTQ9H867 229 aa21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 GPCPD1Q9NPB8 672 aa21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 PICK1Q9NRD5 415 aa21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 SEC63Q9UGP8 760 aaKnown RBP21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 MYH15Q9Y2K3 1946 aa21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 FRMPD2Q68DX3 1309 aaPredicted RBP21.99■■□□□ 1.11
CSPG4P13-201ENST00000565545 TCHHQ07283 1943 aa21.98■■□□□ 1.11
CSPG4P13-201ENST00000565545 MMP1P03956 469 aa21.98■■□□□ 1.11
CSPG4P13-201ENST00000565545 BMP3P12645 472 aa21.98■■□□□ 1.11
CSPG4P13-201ENST00000565545 MAP3K9P80192 1104 aa21.98■■□□□ 1.11
CSPG4P13-201ENST00000565545 ARHGEF6Q15052 776 aa21.98■■□□□ 1.11
CSPG4P13-201ENST00000565545 SLC35G1Q2M3R5 365 aa21.98■■□□□ 1.11
CSPG4P13-201ENST00000565545 ACER1Q8TDN7 264 aa21.98■■□□□ 1.11
CSPG4P13-201ENST00000565545 WDR18Q9BV38 432 aa21.98■■□□□ 1.11
CSPG4P13-201ENST00000565545 CSADQ9Y600 493 aa21.98■■□□□ 1.11
CSPG4P13-201ENST00000565545 CSPP1Q1MSJ5 1256 aa21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 BTNL9Q6UXG8 535 aa21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 KCTD1Q719H9 257 aa21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 RASGRP2Q7LDG7 609 aa21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 CCDC148Q8NFR7 591 aa21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 CCDC12Q8WUD4 166 aaPredicted RBP21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 TMEM106CQ9BVX2 250 aa21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 UBA5Q9GZZ9 404 aa21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 KIAA1683Q9H0B3 1180 aa21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 FOXP1Q9H334 677 aaPredicted RBP21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 ZFYVE28Q9HCC9 887 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms