RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 CTDSPL2Q05D32 466 aa23.58■■□□□ 1.37
CLN6-206ENST00000565471 CHD1LQ86WJ1 897 aa23.58■■□□□ 1.37
CLN6-206ENST00000565471 ARRDC4Q8NCT1 418 aa23.58■■□□□ 1.37
CLN6-206ENST00000565471 FAM227BQ96M60 508 aa23.58■■□□□ 1.37
CLN6-206ENST00000565471 SLC38A10Q9HBR0 1119 aa23.58■■□□□ 1.37
CLN6-206ENST00000565471 ZMYND8Q9ULU4 1186 aaPredicted RBP23.58■■□□□ 1.37
CLN6-206ENST00000565471 TSPY2A6NKD2 308 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 FDX1P10109 184 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 BMP3P12645 472 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 OAZ1P54368 228 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 LRRC26Q2I0M4 334 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 B4GALNT3Q6L9W6 998 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.57■■□□□ 1.36
CLN6-206ENST00000565471 EXOC6Q8TAG9 804 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 KIFC2Q96AC6 838 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 GMCL1Q96IK5 515 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 GDF15Q99988 308 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 TINF2Q9BSI4 451 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 OSBPL3Q9H4L5 887 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 RIPK3Q9Y572 518 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 CTDP1Q9Y5B0 961 aaPredicted RBP23.57■■□□□ 1.36
CLN6-206ENST00000565471 ZMYM6O95789 1325 aa23.57■■□□□ 1.36
CLN6-206ENST00000565471 TRIM6-TRIM34B2RNG4 842 aa23.56■■□□□ 1.36
CLN6-206ENST00000565471 ORC4O43929 436 aa23.56■■□□□ 1.36
CLN6-206ENST00000565471 IGHDP01880 384 aa23.56■■□□□ 1.36
CLN6-206ENST00000565471 FGRP09769 529 aa23.56■■□□□ 1.36
CLN6-206ENST00000565471 BMP8BP34820 402 aa23.56■■□□□ 1.36
CLN6-206ENST00000565471 NUCB1Q02818 461 aa23.56■■□□□ 1.36
CLN6-206ENST00000565471 PRAMEF19Q5SWL8 479 aa23.56■■□□□ 1.36
CLN6-206ENST00000565471 SENP6Q9GZR1 1112 aaPredicted RBP23.56■■□□□ 1.36
CLN6-206ENST00000565471 NMIQ13287 307 aaPredicted RBP23.55■■□□□ 1.36
CLN6-206ENST00000565471 CPXCR1Q8N123 301 aa23.55■■□□□ 1.36
CLN6-206ENST00000565471 MSL3Q8N5Y2 521 aaKnown RBP23.55■■□□□ 1.36
CLN6-206ENST00000565471 IL17RBQ9NRM6 502 aa23.55■■□□□ 1.36
CLN6-206ENST00000565471 STX8Q9UNK0 236 aa23.55■■□□□ 1.36
CLN6-206ENST00000565471 DNAJC25-GNG10A0A024R161 153 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 FGAP02671 866 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 HSPD1P10809 573 aaKnown RBP23.54■■□□□ 1.36
CLN6-206ENST00000565471 SYN1P17600 705 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 NOVP48745 357 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 STAT2P52630 851 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 FAM160B2Q86V87 743 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 PLEKHM2Q8IWE5 1019 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 RILPL2Q969X0 211 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 RAVER2Q9HCJ3 691 aaKnown RBP23.54■■□□□ 1.36
CLN6-206ENST00000565471 INCENPQ9NQS7 918 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 FBXO40Q9UH90 709 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 TACC3Q9Y6A5 838 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 CCDC171Q6TFL3 1326 aa23.54■■□□□ 1.36
CLN6-206ENST00000565471 TMEM232C9JQI7 657 aa23.53■■□□□ 1.36
CLN6-206ENST00000565471 RANBP6O60518 1105 aaKnown RBP23.53■■□□□ 1.36
CLN6-206ENST00000565471 PLA2G6O60733 806 aa23.53■■□□□ 1.36
CLN6-206ENST00000565471 SLC1A4P43007 532 aa23.53■■□□□ 1.36
CLN6-206ENST00000565471 GJC2Q5T442 439 aaPredicted RBP23.53■■□□□ 1.36
CLN6-206ENST00000565471 ANO1Q5XXA6 986 aa23.53■■□□□ 1.36
CLN6-206ENST00000565471 ZNF589Q86UQ0 364 aaPredicted RBP23.53■■□□□ 1.36
CLN6-206ENST00000565471 CHST13Q8NET6 341 aa23.53■■□□□ 1.36
CLN6-206ENST00000565471 CHURC1Q8WUH1 139 aa23.53■■□□□ 1.36
CLN6-206ENST00000565471 STAG1Q8WVM7 1258 aa23.53■■□□□ 1.36
CLN6-206ENST00000565471 DDX11Q96FC9 970 aa23.53■■□□□ 1.36
CLN6-206ENST00000565471 KBTBD13C9JR72 458 aa23.52■■□□□ 1.36
CLN6-206ENST00000565471 NMT2O60551 498 aa23.52■■□□□ 1.36
CLN6-206ENST00000565471 ZNF467Q7Z7K2 595 aaPredicted RBP23.52■■□□□ 1.36
CLN6-206ENST00000565471 SDSP20132 328 aa23.51■■□□□ 1.35
CLN6-206ENST00000565471 MCCP23508 829 aa23.51■■□□□ 1.35
CLN6-206ENST00000565471 MAGEA10P43363 369 aaPredicted RBP23.51■■□□□ 1.35
CLN6-206ENST00000565471 MFAP1P55081 439 aaKnown RBP23.51■■□□□ 1.35
CLN6-206ENST00000565471 MAMDC4Q6UXC1 1216 aa23.51■■□□□ 1.35
CLN6-206ENST00000565471 ISY1Q9ULR0 285 aaKnown RBP23.51■■□□□ 1.35
CLN6-206ENST00000565471 CNPY2Q9Y2B0 182 aa23.51■■□□□ 1.35
CLN6-206ENST00000565471 SYNGAP1Q96PV0 1343 aa23.51■■□□□ 1.35
CLN6-206ENST00000565471 ZNF865P0CJ78 1059 aaPredicted RBP23.5■■□□□ 1.35
CLN6-206ENST00000565471 RARBP10826 455 aa23.5■■□□□ 1.35
CLN6-206ENST00000565471 PCP11498 1178 aaKnown RBP23.5■■□□□ 1.35
CLN6-206ENST00000565471 SLC4A3P48751 1232 aa23.5■■□□□ 1.35
CLN6-206ENST00000565471 LRRC41Q15345 812 aa23.5■■□□□ 1.35
CLN6-206ENST00000565471 RCSD1Q6JBY9 416 aa23.5■■□□□ 1.35
CLN6-206ENST00000565471 RANBP2P49792 3224 aaKnown RBP23.49■■□□□ 1.35
CLN6-206ENST00000565471 AKR1A1P14550 325 aa23.49■■□□□ 1.35
CLN6-206ENST00000565471 TAL1P17542 331 aaPredicted RBP23.49■■□□□ 1.35
CLN6-206ENST00000565471 ATN1P54259 1190 aaPredicted RBP23.49■■□□□ 1.35
CLN6-206ENST00000565471 IKQ13123 557 aaPredicted RBP23.49■■□□□ 1.35
CLN6-206ENST00000565471 ANKRD35Q8N283 1001 aa23.49■■□□□ 1.35
CLN6-206ENST00000565471 XPNPEP3Q9NQH7 507 aa23.49■■□□□ 1.35
CLN6-206ENST00000565471 TOMM22Q9NS69 142 aa23.49■■□□□ 1.35
CLN6-206ENST00000565471 TCP11L1Q9NUJ3 509 aa23.49■■□□□ 1.35
CLN6-206ENST00000565471 SMCHD1A6NHR9 2005 aa23.49■■□□□ 1.35
CLN6-206ENST00000565471 KCTD1Q719H9 257 aa23.48■■□□□ 1.35
CLN6-206ENST00000565471 ACAD9Q9H845 621 aa23.48■■□□□ 1.35
CLN6-206ENST00000565471 ZNF536O15090 1300 aa23.48■■□□□ 1.35
CLN6-206ENST00000565471 SNAI1O95863 264 aaPredicted RBP23.47■■□□□ 1.35
CLN6-206ENST00000565471 RTP1P59025 263 aa23.47■■□□□ 1.35
CLN6-206ENST00000565471 SNX17Q15036 470 aa23.47■■□□□ 1.35
CLN6-206ENST00000565471 TKFCQ3LXA3 575 aa23.47■■□□□ 1.35
CLN6-206ENST00000565471 RRP12Q5JTH9 1297 aaKnown RBP23.47■■□□□ 1.35
CLN6-206ENST00000565471 SLC39A5Q6ZMH5 540 aa23.47■■□□□ 1.35
CLN6-206ENST00000565471 DCAF4Q8WV16 495 aa23.47■■□□□ 1.35
CLN6-206ENST00000565471 SUPT16HQ9Y5B9 1047 aaKnown RBP23.47■■□□□ 1.35
CLN6-206ENST00000565471 HIP1O00291 1037 aa23.46■■□□□ 1.35
CLN6-206ENST00000565471 MYCNP04198 464 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms