RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 SNRNP48Q6IEG0 339 aaKnown RBP10.25□□□□□ -0.77
CAPN3-213ENST00000565173 MAMDC4Q6UXC1 1216 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
CAPN3-213ENST00000565173 SH3RF1Q7Z6J0 888 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 ZNF444Q8N0Y2 327 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-213ENST00000565173 SLC17A8Q8NDX2 589 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 FERMT2Q96AC1 680 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 TRIM43Q96BQ3 446 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-213ENST00000565173 TEX13BQ9BXU2 312 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 SLC38A10Q9HBR0 1119 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 PDLIM7Q9NR12 457 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 PHF24Q9UPV7 400 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 STXBP5LQ9Y2K9 1186 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 LTBP2Q14767 1821 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 TTC41PQ6P2S7 1318 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 SALL3Q9BXA9 1300 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 PLXNA1Q9UIW2 1896 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 FOXP2O15409 715 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 ADAMTS4O75173 837 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 PGK1P00558 417 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 MYCNP04198 464 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-213ENST00000565173 APPP05067 770 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 RARBP10826 455 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 SHHQ15465 462 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 ZMYM1Q5SVZ6 1142 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 FAM109BQ6ICB4 259 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-213ENST00000565173 CCSAPQ6IQ19 270 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-213ENST00000565173 MSL3Q8N5Y2 521 aaKnown RBP10.24□□□□□ -0.77
CAPN3-213ENST00000565173 BADQ92934 168 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 LENG1Q96BZ8 264 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-213ENST00000565173 FGD4Q96M96 766 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 XPNPEP3Q9NQH7 507 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 PRKAG2Q9UGJ0 569 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 SYNPO2Q9UMS6 1093 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 PLIN4Q96Q06 1357 aa10.24□□□□□ -0.77
CAPN3-213ENST00000565173 SPTBN5Q9NRC6 3674 aaKnown RBP10.23□□□□□ -0.77
CAPN3-213ENST00000565173 ZBED4O75132 1171 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 TTLL1O95922 423 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 TLE2Q04725 743 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 C9orf50Q5SZB4 431 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 ZNF467Q7Z7K2 595 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-213ENST00000565173 RNF180Q86T96 592 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 CPXCR1Q8N123 301 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 GMCL1P1Q8NEA9 526 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 KLHDC9Q8NEP7 349 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 NEDD1Q8NHV4 660 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 KIFC2Q96AC6 838 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 ZNF287Q9HBT7 754 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 RAVER2Q9HCJ3 691 aaKnown RBP10.23□□□□□ -0.77
CAPN3-213ENST00000565173 INCENPQ9NQS7 918 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 PRDM5Q9NQX1 630 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-213ENST00000565173 FEM1BQ9UK73 627 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 TACC3Q9Y6A5 838 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 SYNGAP1Q96PV0 1343 aa10.23□□□□□ -0.77
CAPN3-213ENST00000565173 A0A1W2PQ45 241 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-213ENST00000565173 A0A1W2PQY0 241 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 ERC2O15083 957 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 ADCY6O43306 1168 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 AKR1A1P14550 325 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 OAZ1P54368 228 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 TFAP4Q01664 338 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 PPARAQ07869 468 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 LRRFIP1Q32MZ4 808 aaKnown RBP10.22□□□□□ -0.77
CAPN3-213ENST00000565173 LRRC47Q8N1G4 583 aaKnown RBP10.22□□□□□ -0.77
CAPN3-213ENST00000565173 DDX11Q96FC9 970 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 GUCD1Q96NT3 240 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 TSEN34Q9BSV6 310 aaKnown RBP10.22□□□□□ -0.77
CAPN3-213ENST00000565173 NACAP1Q9BZK3 213 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 IL17RBQ9NRM6 502 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 CNPY2Q9Y2B0 182 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.22□□□□□ -0.77
CAPN3-213ENST00000565173 MYH4Q9Y623 1939 aa10.22□□□□□ -0.77
CAPN3-213ENST00000565173 MYADML2A6NDP7 307 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 DLL1O00548 723 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 KIAA0355O15063 1070 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 DUSP11O75319 330 aaKnown RBP10.21□□□□□ -0.77
CAPN3-213ENST00000565173 CLTBP09497 229 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 TSPY3P0CV98 308 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 TSPY8P0CW00 308 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 BMP3P12645 472 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 MX1P20591 662 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 NOVP48745 357 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 SLC4A3P48751 1232 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 ACLYP53396 1101 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 EPHB4P54760 987 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-213ENST00000565173 PDE4BQ07343 736 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 FAAP100Q0VG06 881 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 ACVR2BQ13705 512 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 SLFN13Q68D06 897 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 CCDC129Q6ZRS4 1044 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 ANKRD33Q7Z3H0 272 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 CHST13Q8NET6 341 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 FSD1Q9BTV5 496 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 KATNBL1Q9H079 304 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 NAPBQ9H115 298 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 FAM184BQ9ULE4 1060 aa10.21□□□□□ -0.77
CAPN3-213ENST00000565173 ZNF536O15090 1300 aa10.21□□□□□ -0.78
CAPN3-213ENST00000565173 SYNRGQ9UMZ2 1314 aa10.21□□□□□ -0.78
CAPN3-213ENST00000565173 CHD9Q3L8U1 2897 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms