RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ZBED4O75132 1171 aa22■■□□□ 1.11
CLN6-204ENST00000564752 TTLL1O95922 423 aa22■■□□□ 1.11
CLN6-204ENST00000564752 MYCNP04198 464 aaPredicted RBP22■■□□□ 1.11
CLN6-204ENST00000564752 TAL1P17542 331 aaPredicted RBP22■■□□□ 1.11
CLN6-204ENST00000564752 NEDD1Q8NHV4 660 aa22■■□□□ 1.11
CLN6-204ENST00000564752 ATP11BQ9Y2G3 1177 aa22■■□□□ 1.11
CLN6-204ENST00000564752 ZNF865P0CJ78 1059 aaPredicted RBP21.99■■□□□ 1.11
CLN6-204ENST00000564752 RARBP10826 455 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 ADCYAP1R1P41586 468 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 PDE1AP54750 535 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 PDE4BQ07343 736 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 SNX17Q15036 470 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 SMC5Q8IY18 1101 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 GMCL1P1Q8NEA9 526 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 LBHD1Q9BQE6 289 aaPredicted RBP21.99■■□□□ 1.11
CLN6-204ENST00000564752 LNPKQ9C0E8 428 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 NAPBQ9H115 298 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 PRKAG2Q9UGJ0 569 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 FEM1BQ9UK73 627 aa21.99■■□□□ 1.11
CLN6-204ENST00000564752 SLC3A2P08195 630 aaKnown RBP21.98■■□□□ 1.11
CLN6-204ENST00000564752 TSPY3P0CV98 308 aa21.98■■□□□ 1.11
CLN6-204ENST00000564752 TSPY8P0CW00 308 aa21.98■■□□□ 1.11
CLN6-204ENST00000564752 PPARAQ07869 468 aa21.98■■□□□ 1.11
CLN6-204ENST00000564752 C1orf53Q5VUE5 145 aa21.98■■□□□ 1.11
CLN6-204ENST00000564752 MSL3Q8N5Y2 521 aaKnown RBP21.98■■□□□ 1.11
CLN6-204ENST00000564752 KIFC2Q96AC6 838 aa21.98■■□□□ 1.11
CLN6-204ENST00000564752 SLC38A10Q9HBR0 1119 aa21.98■■□□□ 1.11
CLN6-204ENST00000564752 XPNPEP3Q9NQH7 507 aa21.98■■□□□ 1.11
CLN6-204ENST00000564752 TFAP4Q01664 338 aa21.97■■□□□ 1.11
CLN6-204ENST00000564752 B4GALNT3Q6L9W6 998 aa21.97■■□□□ 1.11
CLN6-204ENST00000564752 CPXCR1Q8N123 301 aa21.97■■□□□ 1.11
CLN6-204ENST00000564752 LRRC47Q8N1G4 583 aaKnown RBP21.97■■□□□ 1.11
CLN6-204ENST00000564752 DEFB123Q8N688 67 aa21.97■■□□□ 1.11
CLN6-204ENST00000564752 FERMT2Q96AC1 680 aa21.97■■□□□ 1.11
CLN6-204ENST00000564752 DDX11Q96FC9 970 aa21.97■■□□□ 1.11
CLN6-204ENST00000564752 PHF24Q9UPV7 400 aa21.97■■□□□ 1.11
CLN6-204ENST00000564752 CNPY2Q9Y2B0 182 aa21.97■■□□□ 1.11
CLN6-204ENST00000564752 CTDP1Q9Y5B0 961 aaPredicted RBP21.97■■□□□ 1.11
CLN6-204ENST00000564752 PLIN4Q96Q06 1357 aa21.97■■□□□ 1.11
CLN6-204ENST00000564752 COL11A1P12107 1806 aaPredicted RBP21.96■■□□□ 1.11
CLN6-204ENST00000564752 DNAJC25-GNG10A0A024R161 153 aa21.96■■□□□ 1.11
CLN6-204ENST00000564752 AKR1A1P14550 325 aa21.96■■□□□ 1.11
CLN6-204ENST00000564752 TRIM60Q495X7 471 aa21.96■■□□□ 1.11
CLN6-204ENST00000564752 SLFN13Q68D06 897 aa21.96■■□□□ 1.11
CLN6-204ENST00000564752 MAMDC4Q6UXC1 1216 aa21.96■■□□□ 1.11
CLN6-204ENST00000564752 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.96■■□□□ 1.11
CLN6-204ENST00000564752 RNF180Q86T96 592 aa21.96■■□□□ 1.11
CLN6-204ENST00000564752 EVI5LQ96CN4 794 aa21.96■■□□□ 1.11
CLN6-204ENST00000564752 RAVER2Q9HCJ3 691 aaKnown RBP21.96■■□□□ 1.11
CLN6-204ENST00000564752 ZNFX1Q9P2E3 1918 aaKnown RBP21.96■■□□□ 1.11
CLN6-204ENST00000564752 LAMA2P24043 3122 aaKnown RBP21.95■■□□□ 1.1
CLN6-204ENST00000564752 FOXP2O15409 715 aa21.95■■□□□ 1.1
CLN6-204ENST00000564752 SNAI1O95863 264 aaPredicted RBP21.95■■□□□ 1.1
CLN6-204ENST00000564752 PGK1P00558 417 aa21.95■■□□□ 1.1
CLN6-204ENST00000564752 IGHDP01880 384 aa21.95■■□□□ 1.1
CLN6-204ENST00000564752 BMP3P12645 472 aa21.95■■□□□ 1.1
CLN6-204ENST00000564752 SLC4A3P48751 1232 aa21.95■■□□□ 1.1
CLN6-204ENST00000564752 OAZ1P54368 228 aa21.95■■□□□ 1.1
CLN6-204ENST00000564752 Q7L0L9 218 aa21.95■■□□□ 1.1
CLN6-204ENST00000564752 SYNGAP1Q96PV0 1343 aa21.95■■□□□ 1.1
CLN6-204ENST00000564752 CCDC129Q6ZRS4 1044 aa21.94■■□□□ 1.1
CLN6-204ENST00000564752 ZNF467Q7Z7K2 595 aaPredicted RBP21.94■■□□□ 1.1
CLN6-204ENST00000564752 CHD1LQ86WJ1 897 aa21.94■■□□□ 1.1
CLN6-204ENST00000564752 FBXO40Q9UH90 709 aa21.94■■□□□ 1.1
CLN6-204ENST00000564752 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.94■■□□□ 1.17e-6■■■■■ 33.6
CLN6-204ENST00000564752 TMEM232C9JQI7 657 aa21.93■■□□□ 1.1
CLN6-204ENST00000564752 FDX1P10109 184 aa21.93■■□□□ 1.1
CLN6-204ENST00000564752 CHST13Q8NET6 341 aa21.93■■□□□ 1.1
CLN6-204ENST00000564752 PDLIM7Q9NR12 457 aa21.93■■□□□ 1.1
CLN6-204ENST00000564752 FAM184BQ9ULE4 1060 aa21.93■■□□□ 1.1
CLN6-204ENST00000564752 SMCHD1A6NHR9 2005 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 TRIM43BA6NCK2 446 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 ADAMTS4O75173 837 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 NUCB1Q02818 461 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 TLE2Q04725 743 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 PPP4R3BQ5MIZ7 849 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 SH3RF1Q7Z6J0 888 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 ANKRD35Q8N283 1001 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 CHURC1Q8WUH1 139 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 TRIM43Q96BQ3 446 aaPredicted RBP21.92■■□□□ 1.1
CLN6-204ENST00000564752 LENG1Q96BZ8 264 aaPredicted RBP21.92■■□□□ 1.1
CLN6-204ENST00000564752 GMCL1Q96IK5 515 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 TSEN34Q9BSV6 310 aaKnown RBP21.92■■□□□ 1.1
CLN6-204ENST00000564752 INCENPQ9NQS7 918 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 PRDM5Q9NQX1 630 aaPredicted RBP21.92■■□□□ 1.1
CLN6-204ENST00000564752 MTMR10Q9NXD2 777 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 A0A0C4DFX4 3053 aa21.92■■□□□ 1.1
CLN6-204ENST00000564752 SLC1A4P43007 532 aa21.91■■□□□ 1.1
CLN6-204ENST00000564752 STAT2P52630 851 aa21.91■■□□□ 1.1
CLN6-204ENST00000564752 CTDSPL2Q05D32 466 aa21.91■■□□□ 1.1
CLN6-204ENST00000564752 STAG1Q8WVM7 1258 aa21.91■■□□□ 1.1
CLN6-204ENST00000564752 FGD4Q96M96 766 aa21.91■■□□□ 1.1
CLN6-204ENST00000564752 IL17RBQ9NRM6 502 aa21.91■■□□□ 1.1
CLN6-204ENST00000564752 ANAPC4Q9UJX5 808 aa21.91■■□□□ 1.1
CLN6-204ENST00000564752 TACC3Q9Y6A5 838 aa21.91■■□□□ 1.1
CLN6-204ENST00000564752 A0A1W2PQ45 241 aaPredicted RBP21.9■■□□□ 1.1
CLN6-204ENST00000564752 A0A1W2PQY0 241 aa21.9■■□□□ 1.1
CLN6-204ENST00000564752 TRIM6-TRIM34B2RNG4 842 aa21.9■■□□□ 1.1
CLN6-204ENST00000564752 POTEB2H3BUK9 544 aa21.9■■□□□ 1.1
CLN6-204ENST00000564752 MCCP23508 829 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms