RNA–Protein interactions for RNA: ENST00000564544.1

COX4I1-206, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 3

Gene COX4I1, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-206ENST00000564544 PRPF38AQ8NAV1 312 aaKnown RBP16.26■□□□□ 0.19
COX4I1-206ENST00000564544 PCSK9Q8NBP7 692 aaKnown RBP16.26■□□□□ 0.19
COX4I1-206ENST00000564544 GLT1D1Q96MS3 346 aa16.26■□□□□ 0.19
COX4I1-206ENST00000564544 DDX19BQ9UMR2 479 aa16.26■□□□□ 0.19
COX4I1-206ENST00000564544 SYNRGQ9UMZ2 1314 aa16.25■□□□□ 0.19
COX4I1-206ENST00000564544 TIMP1P01033 207 aa16.25■□□□□ 0.19
COX4I1-206ENST00000564544 DNAJB2P25686 324 aa16.25■□□□□ 0.19
COX4I1-206ENST00000564544 CST5P28325 142 aaPredicted RBP16.25■□□□□ 0.19
COX4I1-206ENST00000564544 PPIGQ13427 754 aaKnown RBP eCLIP16.25■□□□□ 0.194e-16■□□□□ 9
COX4I1-206ENST00000564544 SNRNP48Q6IEG0 339 aaKnown RBP16.25■□□□□ 0.19
COX4I1-206ENST00000564544 KLHDC9Q8NEP7 349 aa16.25■□□□□ 0.19
COX4I1-206ENST00000564544 PRDM6Q9NQX0 595 aa16.25■□□□□ 0.19
COX4I1-206ENST00000564544 NYAP2Q9P242 653 aa16.25■□□□□ 0.19
COX4I1-206ENST00000564544 FBXO40Q9UH90 709 aa16.25■□□□□ 0.19
COX4I1-206ENST00000564544 ZHX1Q9UKY1 873 aaPredicted RBP16.25■□□□□ 0.19
COX4I1-206ENST00000564544 UNC80Q8N2C7 3258 aa16.25■□□□□ 0.19
COX4I1-206ENST00000564544 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 ATP2A1O14983 1001 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 ZBED4O75132 1171 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 KCNA10Q16322 511 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 SBK1Q52WX2 424 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 MFSD5Q6N075 450 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 GIMAP6Q6P9H5 292 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
COX4I1-206ENST00000564544 TIFAQ96CG3 184 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 BCL11AQ9H165 835 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 ZNF576Q9H609 170 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 MKNK2Q9HBH9 465 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 ZNF287Q9HBT7 754 aa16.24■□□□□ 0.19
COX4I1-206ENST00000564544 F5H6K3 240 aa16.23■□□□□ 0.19
COX4I1-206ENST00000564544 SNAI1O95863 264 aaPredicted RBP16.23■□□□□ 0.19
COX4I1-206ENST00000564544 KLRC3Q07444 240 aa16.23■□□□□ 0.19
COX4I1-206ENST00000564544 TJAP1Q5JTD0 557 aa16.23■□□□□ 0.19
COX4I1-206ENST00000564544 VTI1AQ96AJ9 217 aa16.23■□□□□ 0.19
COX4I1-206ENST00000564544 LENG1Q96BZ8 264 aaPredicted RBP16.23■□□□□ 0.19
COX4I1-206ENST00000564544 ABHD16BQ9H3Z7 469 aa16.23■□□□□ 0.19
COX4I1-206ENST00000564544 TBX21Q9UL17 535 aa16.23■□□□□ 0.19
COX4I1-206ENST00000564544 SYNPO2Q9UMS6 1093 aa16.23■□□□□ 0.19
COX4I1-206ENST00000564544 TTC28Q96AY4 2481 aa16.23■□□□□ 0.19
COX4I1-206ENST00000564544 LAMA2P24043 3122 aaKnown RBP16.23■□□□□ 0.19
COX4I1-206ENST00000564544 SMIM22K7EJ46 135 aa16.22■□□□□ 0.19
COX4I1-206ENST00000564544 TLR3O15455 904 aaKnown RBP16.22■□□□□ 0.19
COX4I1-206ENST00000564544 NDUFB10O96000 172 aa16.22■□□□□ 0.19
COX4I1-206ENST00000564544 OAZ1P54368 228 aa16.22■□□□□ 0.19
COX4I1-206ENST00000564544 ACVR2BQ13705 512 aa16.22■□□□□ 0.19
COX4I1-206ENST00000564544 GRIN2CQ14957 1233 aa16.22■□□□□ 0.19
COX4I1-206ENST00000564544 SLFNL1Q499Z3 407 aa16.22■□□□□ 0.19
COX4I1-206ENST00000564544 CCSAPQ6IQ19 270 aaPredicted RBP16.22■□□□□ 0.19
COX4I1-206ENST00000564544 TMEM199Q8N511 208 aa16.22■□□□□ 0.19
COX4I1-206ENST00000564544 CHST13Q8NET6 341 aa16.22■□□□□ 0.19
COX4I1-206ENST00000564544 GAS2L1Q99501 681 aaPredicted RBP16.22■□□□□ 0.19
COX4I1-206ENST00000564544 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.22■□□□□ 0.19
COX4I1-206ENST00000564544 ZBTB40Q9NUA8 1239 aa16.22■□□□□ 0.19
COX4I1-206ENST00000564544 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.22■□□□□ 0.19
COX4I1-206ENST00000564544 MYH8P13535 1937 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 A0A0U1RQG5 324 aaPredicted RBP16.21■□□□□ 0.19
COX4I1-206ENST00000564544 C6orf222P0C671 652 aaPredicted RBP16.21■□□□□ 0.19
COX4I1-206ENST00000564544 FDX1P10109 184 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 RASA1P20936 1047 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 CDK7P50613 346 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 GJA9P57773 515 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 PSRC1Q6PGN9 363 aaPredicted RBP16.21■□□□□ 0.19
COX4I1-206ENST00000564544 SIRT2Q8IXJ6 389 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 CPXCR1Q8N123 301 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
COX4I1-206ENST00000564544 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.21■□□□□ 0.192e-8■□□□□ 8.1
COX4I1-206ENST00000564544 PUS7LQ9H0K6 701 aaKnown RBP16.21■□□□□ 0.19
COX4I1-206ENST00000564544 UPF3AQ9H1J1 476 aaKnown RBP16.21■□□□□ 0.19
COX4I1-206ENST00000564544 FEM1BQ9UK73 627 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 RIPK3Q9Y572 518 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 PARP14Q460N5 1801 aa16.21■□□□□ 0.19
COX4I1-206ENST00000564544 ZNFX1Q9P2E3 1918 aaKnown RBP16.21■□□□□ 0.19
COX4I1-206ENST00000564544 ARVCFO00192 962 aa16.2■□□□□ 0.18
COX4I1-206ENST00000564544 ASGR1P07306 291 aa16.2■□□□□ 0.18
COX4I1-206ENST00000564544 GNASQ5JWF2 1037 aa16.2■□□□□ 0.18
COX4I1-206ENST00000564544 CCDC129Q6ZRS4 1044 aa16.2■□□□□ 0.18
COX4I1-206ENST00000564544 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
COX4I1-206ENST00000564544 STRBPQ96SI9 672 aaKnown RBP16.2■□□□□ 0.18
COX4I1-206ENST00000564544 SEZ6LQ9BYH1 1024 aa16.2■□□□□ 0.18
COX4I1-206ENST00000564544 LRRCC1Q9C099 1032 aa16.2■□□□□ 0.18
COX4I1-206ENST00000564544 MTIF3Q9H2K0 278 aaKnown RBP16.2■□□□□ 0.18
COX4I1-206ENST00000564544 SLC38A10Q9HBR0 1119 aa16.2■□□□□ 0.18
COX4I1-206ENST00000564544 GNAT2P19087 354 aa16.19■□□□□ 0.18
COX4I1-206ENST00000564544 SLC4A3P48751 1232 aa16.19■□□□□ 0.18
COX4I1-206ENST00000564544 NKX3-2P78367 333 aa16.19■□□□□ 0.18
COX4I1-206ENST00000564544 RAB30Q15771 203 aa16.19■□□□□ 0.18
COX4I1-206ENST00000564544 CCDC144BQ3MJ40 725 aa16.19■□□□□ 0.18
COX4I1-206ENST00000564544 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
COX4I1-206ENST00000564544 MKL1Q969V6 931 aa16.19■□□□□ 0.18
COX4I1-206ENST00000564544 KIFC2Q96AC6 838 aa16.19■□□□□ 0.18
COX4I1-206ENST00000564544 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
COX4I1-206ENST00000564544 BAZ2AQ9UIF9 1905 aaKnown RBP16.18■□□□□ 0.18
COX4I1-206ENST00000564544 MYADML2A6NDP7 307 aa16.18■□□□□ 0.18
COX4I1-206ENST00000564544 GSG1L2A8MUP6 293 aa16.18■□□□□ 0.18
COX4I1-206ENST00000564544 MINDY4BA8MYZ0 360 aa16.18■□□□□ 0.18
COX4I1-206ENST00000564544 CABYRO75952 493 aa16.18■□□□□ 0.18
COX4I1-206ENST00000564544 TMEM240Q5SV17 173 aa16.18■□□□□ 0.18
COX4I1-206ENST00000564544 RASIP1Q5U651 963 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms