RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	KBTBD12	Q3ZCT8	623 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	IQGAP3	Q86VI3	1631 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	GCLC	P48506	637 aa	Predicted RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	GALNT17	Q6IS24	598 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	UBL4B	Q8N7F7	174 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	TPCN1	Q9ULQ1	816 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	HPD	P32754	393 aa	Predicted RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	AGBL2	Q5U5Z8	902 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	GSDMB	Q8TAX9	411 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	ARHGEF2	Q92974	986 aa	Known RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	USP40	Q9NVE5	1235 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	POLR3E	Q9NVU0	708 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	PCDHA5	Q9Y5H7	936 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	FAM200B	P0CF97	657 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	ZBED6	P86452	979 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	CCDC62	Q6P9F0	684 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	HYOU1	Q9Y4L1	999 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	POSTN	Q15063	836 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	KRT71	Q3SY84	523 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	WASHC2D	Q5SRD0	308 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	TUBA3C	Q13748	450 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	ITGA9	Q13797	1035 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	SPDYE1	Q8NFV5	336 aa	Predicted RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	PITPNM3	Q9BZ71	974 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	ATP10D	Q9P241	1426 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	SCP2	P22307	547 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	BICDL1	Q6ZP65	573 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	DHX58	Q96C10	678 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	ELAC2	Q9BQ52	826 aa	Known RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	UNC45A	Q9H3U1	944 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	FRMPD1	Q5SYB0	1578 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	PARP1	P09874	1014 aa	Known RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	CATIP	Q7Z7H3	387 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	IPO5	O00410	1097 aa	Known RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	PCYT1A	P49585	367 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	ITIH4	Q14624	930 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	STK38L	Q9Y2H1	464 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	LRRC42	Q9Y546	428 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	SKOR1	P84550	965 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	PKP1	Q13835	747 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	KRT23	Q9C075	422 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	SLC27A2	O14975	620 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	STX2	P32856	288 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	TEKT4	Q8WW24	435 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	TMEM87B	Q96K49	555 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	KAT14	Q9H8E8	782 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	RASGRF1	Q13972	1273 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	ZKSCAN3	Q9BRR0	538 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	TRPC6	Q9Y210	931 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	SPATA4	Q8NEY3	305 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	DMAP1	Q9NPF5	467 aa	Predicted RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	KDM5C	P41229	1560 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	CTNND1	O60716	968 aa	Known RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	FAM81B	Q96LP2	452 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	NUDCD1	Q96RS6	583 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	FERMT1	Q9BQL6	677 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	KCNF1	Q9H3M0	494 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	NCAPD2	Q15021	1401 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	MAN1A1	P33908	653 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288		Q6ZUG5	572 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	TCEAL9	Q9UHQ7	104 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	LRRC8C	Q8TDW0	803 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	NOD2	Q9HC29	1040 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	GUCY2D	Q02846	1103 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288		Q4G0T1	1027 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	FBXW10	Q5XX13	1052 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	C8orf74	Q6P047	294 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	CABP1	Q9NZU7	370 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	ANO9	A1A5B4	782 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	EEF1G	P26641	437 aa	Known RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	FAM186B	Q8IYM0	893 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	CARD14	Q9BXL6	1004 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	AATF	Q9NY61	560 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	POLR2D	O15514	142 aa	Known RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	E2F5	Q15329	346 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	TTC6	Q86TZ1	520 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	CIDEB	Q9UHD4	219 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	MCM8	Q9UJA3	840 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	UNC13B	O14795	1591 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	DIAPH2	O60879	1101 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	DDX23	Q9BUQ8	820 aa	Known RBP	4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	PCDHA13	Q9Y5I0	950 aa		4.67	□□□□□ -1.66
MACF1-231	ENST00000564288	IMPDH2	P12268	514 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	CAPZA3	Q96KX2	299 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	FRMD4B	Q9Y2L6	1034 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	IFIT3	O14879	490 aa	Known RBP	4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	CYB5D1	Q6P9G0	228 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	LCA5	Q86VQ0	697 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	GGNBP2	Q9H3C7	697 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	ZNF711	Q9Y462	761 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	RFC1	P35251	1148 aa	Predicted RBP	4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	TRAPPC10	P48553	1259 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	NEK2	P51955	445 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	NOC2L	Q9Y3T9	749 aa	Known RBP	4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	UBN2	Q6ZU65	1347 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	ZBTB43	O43298	467 aa		4.66	□□□□□ -1.66
MACF1-231	ENST00000564288	NR1D1	P20393	614 aa		4.66	□□□□□ -1.66

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