RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 COPB2P35606 906 aa20.97■□□□□ 0.95
NME3-205ENST00000563854 FXR1P51114 621 aaKnown RBP eCLIP20.97■□□□□ 0.95
NME3-205ENST00000563854 IKQ13123 557 aaPredicted RBP20.97■□□□□ 0.95
NME3-205ENST00000563854 MCMDC2Q4G0Z9 681 aa20.97■□□□□ 0.95
NME3-205ENST00000563854 GMCL1P1Q8NEA9 526 aa20.97■□□□□ 0.95
NME3-205ENST00000563854 MKL1Q969V6 931 aa20.97■□□□□ 0.95
NME3-205ENST00000563854 MTMR7Q9Y216 660 aa20.97■□□□□ 0.95
NME3-205ENST00000563854 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.97■□□□□ 0.95
NME3-205ENST00000563854 SUPT16HQ9Y5B9 1047 aaKnown RBP20.97■□□□□ 0.95
NME3-205ENST00000563854 RRP12Q5JTH9 1297 aaKnown RBP20.96■□□□□ 0.95
NME3-205ENST00000563854 RAVER2Q9HCJ3 691 aaKnown RBP20.96■□□□□ 0.95
NME3-205ENST00000563854 FEM1BQ9UK73 627 aa20.96■□□□□ 0.95
NME3-205ENST00000563854 NMT2O60551 498 aa20.95■□□□□ 0.94
NME3-205ENST00000563854 COL6A1P12109 1028 aa20.95■□□□□ 0.94
NME3-205ENST00000563854 BMP3P12645 472 aa20.95■□□□□ 0.94
NME3-205ENST00000563854 NUCB1Q02818 461 aa20.95■□□□□ 0.94
NME3-205ENST00000563854 ZNF589Q86UQ0 364 aaPredicted RBP20.95■□□□□ 0.94
NME3-205ENST00000563854 SENP6Q9GZR1 1112 aaPredicted RBP20.95■□□□□ 0.94
NME3-205ENST00000563854 SYNPO2Q9UMS6 1093 aa20.95■□□□□ 0.94
NME3-205ENST00000563854 RIPK3Q9Y572 518 aa20.95■□□□□ 0.94
NME3-205ENST00000563854 TMEM232C9JQI7 657 aa20.94■□□□□ 0.94
NME3-205ENST00000563854 IGHA2P01877 340 aa20.94■□□□□ 0.94
NME3-205ENST00000563854 LRRC26Q2I0M4 334 aa20.94■□□□□ 0.94
NME3-205ENST00000563854 GJC2Q5T442 439 aaPredicted RBP20.94■□□□□ 0.94
NME3-205ENST00000563854 PLEKHM2Q8IWE5 1019 aa20.94■□□□□ 0.94
NME3-205ENST00000563854 DDX11Q96FC9 970 aa20.94■□□□□ 0.94
NME3-205ENST00000563854 TACC3Q9Y6A5 838 aa20.94■□□□□ 0.94
NME3-205ENST00000563854 CCDC171Q6TFL3 1326 aa20.94■□□□□ 0.94
NME3-205ENST00000563854 SEPT4O43236 478 aa20.93■□□□□ 0.94
NME3-205ENST00000563854 FGAP02671 866 aa20.93■□□□□ 0.94
NME3-205ENST00000563854 MCCP23508 829 aa20.93■□□□□ 0.94
NME3-205ENST00000563854 SLC1A4P43007 532 aa20.93■□□□□ 0.94
NME3-205ENST00000563854 ATN1P54259 1190 aaPredicted RBP20.93■□□□□ 0.94
NME3-205ENST00000563854 HAND2P61296 217 aa20.93■□□□□ 0.94
NME3-205ENST00000563854 IRX6P78412 446 aaPredicted RBP20.93■□□□□ 0.94
NME3-205ENST00000563854 PPP4R3BQ5MIZ7 849 aa20.93■□□□□ 0.94
NME3-205ENST00000563854 HOMER2Q9NSB8 354 aa20.93■□□□□ 0.94
NME3-205ENST00000563854 ANAPC4Q9UJX5 808 aa20.93■□□□□ 0.94
NME3-205ENST00000563854 PLXNA1Q9UIW2 1896 aa20.92■□□□□ 0.94
NME3-205ENST00000563854 ZNFX1Q9P2E3 1918 aaKnown RBP20.92■□□□□ 0.94
NME3-205ENST00000563854 DNM1LO00429 736 aa20.92■□□□□ 0.94
NME3-205ENST00000563854 HSPD1P10809 573 aaKnown RBP20.92■□□□□ 0.94
NME3-205ENST00000563854 STAT2P52630 851 aa20.92■□□□□ 0.94
NME3-205ENST00000563854 ALX1Q15699 326 aa20.92■□□□□ 0.94
NME3-205ENST00000563854 ZNF792Q3KQV3 632 aa20.92■□□□□ 0.94
NME3-205ENST00000563854 RASGRP2Q7LDG7 609 aa20.92■□□□□ 0.94
NME3-205ENST00000563854 TINF2Q9BSI4 451 aa20.92■□□□□ 0.94
NME3-205ENST00000563854 SLC38A10Q9HBR0 1119 aa20.92■□□□□ 0.94
NME3-205ENST00000563854 IL17RBQ9NRM6 502 aa20.92■□□□□ 0.94
NME3-205ENST00000563854 TRIOBPQ9H2D6 2365 aa20.92■□□□□ 0.94
NME3-205ENST00000563854 KBTBD13C9JR72 458 aa20.91■□□□□ 0.94
NME3-205ENST00000563854 SDSP20132 328 aa20.91■□□□□ 0.94
NME3-205ENST00000563854 CCDC96Q2M329 555 aa20.91■□□□□ 0.94
NME3-205ENST00000563854 KCTD1Q719H9 257 aa20.91■□□□□ 0.94
NME3-205ENST00000563854 ARRDC4Q8NCT1 418 aa20.91■□□□□ 0.94
NME3-205ENST00000563854 GMCL1Q96IK5 515 aa20.91■□□□□ 0.94
NME3-205ENST00000563854 PRO3102Q9H379 93 aa20.91■□□□□ 0.94
NME3-205ENST00000563854 DIAPH3Q9NSV4 1193 aa20.91■□□□□ 0.94
NME3-205ENST00000563854 ORC4O43929 436 aa20.9■□□□□ 0.94
NME3-205ENST00000563854 TAL1P17542 331 aaPredicted RBP20.9■□□□□ 0.94
NME3-205ENST00000563854 MFAP1P55081 439 aaKnown RBP20.9■□□□□ 0.94
NME3-205ENST00000563854 FAM160B2Q86V87 743 aa20.9■□□□□ 0.94
NME3-205ENST00000563854 ANKRD35Q8N283 1001 aa20.9■□□□□ 0.94
NME3-205ENST00000563854 CHURC1Q8WUH1 139 aa20.9■□□□□ 0.94
NME3-205ENST00000563854 DIS3Q9Y2L1 958 aaKnown RBP20.9■□□□□ 0.94
NME3-205ENST00000563854 ATP2A1O14983 1001 aa20.89■□□□□ 0.93
NME3-205ENST00000563854 SNAP25P60880 206 aa20.89■□□□□ 0.93
NME3-205ENST00000563854 CCDC174Q6PII3 467 aa20.89■□□□□ 0.93
NME3-205ENST00000563854 CWC27Q6UX04 472 aaKnown RBP20.89■□□□□ 0.93
NME3-205ENST00000563854 TICAM2Q86XR7 235 aa20.89■□□□□ 0.93
NME3-205ENST00000563854 STAG1Q8WVM7 1258 aa20.89■□□□□ 0.93
NME3-205ENST00000563854 OSBPL3Q9H4L5 887 aa20.89■□□□□ 0.93
NME3-205ENST00000563854 CNPY2Q9Y2B0 182 aa20.89■□□□□ 0.93
NME3-205ENST00000563854 ZMYM6O95789 1325 aa20.88■□□□□ 0.93
NME3-205ENST00000563854 RARBP10826 455 aa20.88■□□□□ 0.93
NME3-205ENST00000563854 MAGEA10P43363 369 aaPredicted RBP20.88■□□□□ 0.93
NME3-205ENST00000563854 LENG1Q96BZ8 264 aaPredicted RBP20.88■□□□□ 0.93
NME3-205ENST00000563854 XPNPEP3Q9NQH7 507 aa20.88■□□□□ 0.93
NME3-205ENST00000563854 FBXO40Q9UH90 709 aa20.88■□□□□ 0.93
NME3-205ENST00000563854 ZHX1Q9UKY1 873 aaPredicted RBP20.88■□□□□ 0.93
NME3-205ENST00000563854 OAZ1P54368 228 aa20.87■□□□□ 0.93
NME3-205ENST00000563854 RCSD1Q6JBY9 416 aa20.87■□□□□ 0.93
NME3-205ENST00000563854 TBC1D10CQ8IV04 446 aa20.87■□□□□ 0.93
NME3-205ENST00000563854 CHST13Q8NET6 341 aa20.87■□□□□ 0.93
NME3-205ENST00000563854 FERMT2Q96AC1 680 aa20.87■□□□□ 0.93
NME3-205ENST00000563854 AGBL1Q96MI9 1066 aa20.87■□□□□ 0.93
NME3-205ENST00000563854 GDF15Q99988 308 aa20.87■□□□□ 0.93
NME3-205ENST00000563854 NRBP1Q9UHY1 535 aa20.87■□□□□ 0.93
NME3-205ENST00000563854 ATP11BQ9Y2G3 1177 aa20.87■□□□□ 0.93
NME3-205ENST00000563854 RANBP2P49792 3224 aaKnown RBP20.86■□□□□ 0.93
NME3-205ENST00000563854 PGK1P00558 417 aa20.86■□□□□ 0.93
NME3-205ENST00000563854 FDX1P10109 184 aa20.86■□□□□ 0.93
NME3-205ENST00000563854 RTP1P59025 263 aa20.86■□□□□ 0.93
NME3-205ENST00000563854 LRRC41Q15345 812 aa20.86■□□□□ 0.93
NME3-205ENST00000563854 MFSD6Q6ZSS7 791 aa20.86■□□□□ 0.93
NME3-205ENST00000563854 RNF146Q9NTX7 359 aa20.86■□□□□ 0.93
NME3-205ENST00000563854 FRMPD2Q68DX3 1309 aaPredicted RBP20.85■□□□□ 0.93
NME3-205ENST00000563854 DNAJC25-GNG10A0A024R161 153 aa20.85■□□□□ 0.93
NME3-205ENST00000563854 FGRP09769 529 aa20.85■□□□□ 0.93
NME3-205ENST00000563854 ZNF865P0CJ78 1059 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms