RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 ANTXR1Q9H6X2 564 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 RUBCNLQ9H714 662 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 PAG1Q9NWQ8 432 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 ZNF646O15015 1829 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 SCN9AQ15858 1988 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 A0A1W2PNR3 127 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 GOLIM4O00461 696 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 FRAT2O75474 233 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 MAP4K4O95819 1239 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 RECKO95980 971 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 CHGBP05060 677 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 PRDX5P30044 214 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 SERPINB4P48594 390 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 RGS3P49796 1198 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 GMPSP49915 693 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 EIF6P56537 245 aaKnown RBP6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 LBRQ14739 615 aaKnown RBP6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 ARSJQ5FYB0 599 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 PGBD3Q8N328 593 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 WDR66Q8TBY9 1149 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 COL26A1Q96A83 441 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 VTI1AQ96AJ9 217 aa6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 ZNF837Q96EG3 531 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 NUCKS1Q9H1E3 243 aaKnown RBP6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.29□□□□□ -1.4
HERPUD1-207ENST00000563781 TIAM2Q8IVF5 1701 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 SHTN1A0MZ66 631 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 DDNO94850 711 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 VSIG8P0DPA2 414 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 SDSP20132 328 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 UBAP2LQ14157 1087 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 TNIP1Q15025 636 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 BMP2KLQ5H9B9 411 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 MFSD14BQ5SR56 506 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 CAPN12Q6ZSI9 719 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 SV2AQ7L0J3 742 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 NLRP8Q86W28 1048 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 GPC2Q8N158 579 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 KBTBD3Q8NAB2 608 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 AGBL3Q8NEM8 1001 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 TBC1D22AQ8WUA7 517 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 NSUN4Q96CB9 384 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 KLRG1Q96E93 195 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 ABCF2Q9UG63 623 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 SUGT1Q9Y2Z0 365 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 GPC6Q9Y625 555 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 GJA3Q9Y6H8 435 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 CHD4Q14839 1912 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 AKAP11Q9UKA4 1901 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 SBF1O95248 1867 aa6.28□□□□□ -1.4
HERPUD1-207ENST00000563781 GAKO14976 1311 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 MYO3BQ8WXR4 1341 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 TCRBV5S4A2TA0A5A2 114 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 CDC14CA4D256 554 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 GLTPD2A6NH11 291 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 LDHBP07195 334 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 PDE6AP16499 860 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 RPS12P25398 132 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 ZNF280AP59817 542 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 MECOMQ03112 1051 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 TTF1Q15361 905 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 RTN1Q16799 776 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 EFHC2Q5JST6 749 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 LCE2CQ5TA81 110 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 TREML4Q6UXN2 200 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 ADGRA1Q86SQ6 560 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 KIAA0825Q8IV33 1275 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 ZGPATQ8N5A5 531 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 GPR161Q8N6U8 529 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 DPF2Q92785 391 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 EVI5LQ96CN4 794 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 MYO19Q96H55 970 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 ZBED3Q96IU2 234 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 MKNK1Q9BUB5 465 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 PCDHAC2Q9Y5I4 1007 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 RFX7Q2KHR2 1363 aa6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 DICER1Q9UPY3 1922 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-207ENST00000563781 F8W031 263 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 IDH1O75874 414 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 WFS1O76024 890 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 EGFRP00533 1210 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 NCLP19338 710 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 ADD2P35612 726 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 SCNN1AP37088 669 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 CRKP46108 304 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 HDLBPQ00341 1268 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 MAP3K12Q12852 859 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 NAALADL2Q58DX5 795 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 SPTY2D1Q68D10 685 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 DZIP1Q86YF9 867 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 CNTROBQ8N137 903 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 TRPM4Q8TD43 1214 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 IRF7Q92985 503 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 RILPL2Q969X0 211 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 GTPBP3Q969Y2 492 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 FSD1Q9BTV5 496 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 ZCCHC2Q9C0B9 1178 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 GPRC5DQ9NZD1 345 aa6.26□□□□□ -1.41
HERPUD1-207ENST00000563781 RAI14Q9P0K7 980 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms