RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 ATP2A1O14983 1001 aa23.85■■□□□ 1.41
CMTM3-206ENST00000563672 ZBED4O75132 1171 aa23.85■■□□□ 1.41
CMTM3-206ENST00000563672 UBXN2AP68543 259 aa23.85■■□□□ 1.41
CMTM3-206ENST00000563672 TRDNQ13061 729 aa23.85■■□□□ 1.41
CMTM3-206ENST00000563672 CASC1Q6TDU7 716 aa23.85■■□□□ 1.41
CMTM3-206ENST00000563672 NCAPG2Q86XI2 1143 aa23.85■■□□□ 1.41
CMTM3-206ENST00000563672 POTEFA5A3E0 1075 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 MYCP01106 439 aaPredicted RBP23.84■■□□□ 1.41
CMTM3-206ENST00000563672 INHAP05111 366 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 HOXC6P09630 235 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 SNHG28P0DPA3 235 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 FDX1P10109 184 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 STOX1Q6ZVD7 989 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 CYB5R4Q7L1T6 521 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 ABRAQ8N0Z2 381 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 ENAHQ8N8S7 591 aaPredicted RBP23.84■■□□□ 1.41
CMTM3-206ENST00000563672 TRIB2Q92519 343 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 TMEM106CQ9BVX2 250 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 TEX13BQ9BXU2 312 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 ANO2Q9NQ90 1003 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 ISY1Q9ULR0 285 aaKnown RBP23.84■■□□□ 1.41
CMTM3-206ENST00000563672 MTMR7Q9Y216 660 aa23.84■■□□□ 1.41
CMTM3-206ENST00000563672 KIAA0100Q14667 2235 aaKnown RBP23.83■■□□□ 1.41
CMTM3-206ENST00000563672 HMGCRP04035 888 aa23.83■■□□□ 1.41
CMTM3-206ENST00000563672 PDHBP11177 359 aa23.83■■□□□ 1.41
CMTM3-206ENST00000563672 COPB2P35606 906 aa23.83■■□□□ 1.41
CMTM3-206ENST00000563672 NECTIN1Q15223 517 aa23.83■■□□□ 1.41
CMTM3-206ENST00000563672 TRMT44Q8IYL2 757 aaKnown RBP23.83■■□□□ 1.41
CMTM3-206ENST00000563672 APBA2Q99767 749 aa23.83■■□□□ 1.41
CMTM3-206ENST00000563672 TNKSO95271 1327 aa23.83■■□□□ 1.4
CMTM3-206ENST00000563672 CCL5P13501 91 aa23.82■■□□□ 1.4
CMTM3-206ENST00000563672 ADORA2AP29274 412 aa23.82■■□□□ 1.4
CMTM3-206ENST00000563672 OAZ1P54368 228 aa23.82■■□□□ 1.4
CMTM3-206ENST00000563672 CCDC96Q2M329 555 aa23.82■■□□□ 1.4
CMTM3-206ENST00000563672 BTNL9Q6UXG8 535 aa23.82■■□□□ 1.4
CMTM3-206ENST00000563672 NCOA7Q8NI08 942 aa23.82■■□□□ 1.4
CMTM3-206ENST00000563672 UBAC1Q9BSL1 405 aa23.82■■□□□ 1.4
CMTM3-206ENST00000563672 PRR12Q9ULL5 1215 aa23.82■■□□□ 1.4
CMTM3-206ENST00000563672 SLC27A2O14975 620 aa23.81■■□□□ 1.4
CMTM3-206ENST00000563672 IKQ13123 557 aaPredicted RBP23.81■■□□□ 1.4
CMTM3-206ENST00000563672 SEC23AQ15436 765 aa23.81■■□□□ 1.4
CMTM3-206ENST00000563672 CCL14Q16627 93 aa23.81■■□□□ 1.4
CMTM3-206ENST00000563672 SNRNP48Q6IEG0 339 aaKnown RBP23.81■■□□□ 1.4
CMTM3-206ENST00000563672 TTBK2Q6IQ55 1244 aa23.81■■□□□ 1.4
CMTM3-206ENST00000563672 CPXCR1Q8N123 301 aa23.81■■□□□ 1.4
CMTM3-206ENST00000563672 PNMA1Q8ND90 353 aa23.81■■□□□ 1.4
CMTM3-206ENST00000563672 KAT14Q9H8E8 782 aa23.81■■□□□ 1.4
CMTM3-206ENST00000563672 RAVER2Q9HCJ3 691 aaKnown RBP23.81■■□□□ 1.4
CMTM3-206ENST00000563672 RIPK3Q9Y572 518 aa23.81■■□□□ 1.4
CMTM3-206ENST00000563672 CTDP1Q9Y5B0 961 aaPredicted RBP23.81■■□□□ 1.4
CMTM3-206ENST00000563672 FCER1AP12319 257 aa23.8■■□□□ 1.4
CMTM3-206ENST00000563672 ZNF543Q08ER8 600 aa23.8■■□□□ 1.4
CMTM3-206ENST00000563672 TRIM32Q13049 653 aa23.8■■□□□ 1.4
CMTM3-206ENST00000563672 CREB3L3Q68CJ9 461 aa23.8■■□□□ 1.4
CMTM3-206ENST00000563672 RALYLQ86SE5 291 aaKnown RBP23.8■■□□□ 1.4
CMTM3-206ENST00000563672 NPLOC4Q8TAT6 608 aa23.8■■□□□ 1.4
CMTM3-206ENST00000563672 RNF208Q9H0X6 261 aa23.8■■□□□ 1.4
CMTM3-206ENST00000563672 UNC93B1Q9H1C4 597 aa23.8■■□□□ 1.4
CMTM3-206ENST00000563672 GPCPD1Q9NPB8 672 aa23.8■■□□□ 1.4
CMTM3-206ENST00000563672 FRMPD2Q68DX3 1309 aaPredicted RBP23.8■■□□□ 1.4
CMTM3-206ENST00000563672 BRCA2P51587 3418 aa23.79■■□□□ 1.4
CMTM3-206ENST00000563672 COBLO75128 1261 aa23.79■■□□□ 1.4
CMTM3-206ENST00000563672 GJB1P08034 283 aa23.79■■□□□ 1.4
CMTM3-206ENST00000563672 ZKSCAN1P17029 563 aaPredicted RBP23.79■■□□□ 1.4
CMTM3-206ENST00000563672 MAP3K21Q5TCX8 1036 aa23.79■■□□□ 1.4
CMTM3-206ENST00000563672 MB21D2Q8IYB1 491 aaPredicted RBP23.79■■□□□ 1.4
CMTM3-206ENST00000563672 COL11A1P12107 1806 aaPredicted RBP23.79■■□□□ 1.4
CMTM3-206ENST00000563672 ZNF536O15090 1300 aa23.79■■□□□ 1.4
CMTM3-206ENST00000563672 IGHA2P01877 340 aa23.78■■□□□ 1.4
CMTM3-206ENST00000563672 EN2P19622 333 aaPredicted RBP23.78■■□□□ 1.4
CMTM3-206ENST00000563672 SLC16A2P36021 539 aa23.78■■□□□ 1.4
CMTM3-206ENST00000563672 GPATCH4Q5T3I0 446 aaKnown RBP23.78■■□□□ 1.4
CMTM3-206ENST00000563672 IFIT1BQ5T764 474 aaKnown RBP23.78■■□□□ 1.4
CMTM3-206ENST00000563672 DPP9Q86TI2 863 aa23.78■■□□□ 1.4
CMTM3-206ENST00000563672 FLRT1Q9NZU1 646 aa23.78■■□□□ 1.4
CMTM3-206ENST00000563672 ANTXR2P58335 489 aa23.77■■□□□ 1.4
CMTM3-206ENST00000563672 KCTD2Q14681 263 aa23.77■■□□□ 1.4
CMTM3-206ENST00000563672 SYDE2Q5VT97 1194 aa23.77■■□□□ 1.4
CMTM3-206ENST00000563672 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.77■■□□□ 1.4
CMTM3-206ENST00000563672 MMP19Q99542 508 aa23.77■■□□□ 1.4
CMTM3-206ENST00000563672 RANBP17Q9H2T7 1088 aaKnown RBP23.77■■□□□ 1.4
CMTM3-206ENST00000563672 PAK6Q9NQU5 681 aaPredicted RBP23.77■■□□□ 1.4
CMTM3-206ENST00000563672 ZNF236Q9UL36 1845 aa23.76■■□□□ 1.39
CMTM3-206ENST00000563672 IFIT3O14879 490 aaKnown RBP23.76■■□□□ 1.39
CMTM3-206ENST00000563672 SNAP25P60880 206 aa23.76■■□□□ 1.39
CMTM3-206ENST00000563672 CHST13Q8NET6 341 aa23.76■■□□□ 1.39
CMTM3-206ENST00000563672 AGBL1Q96MI9 1066 aa23.76■■□□□ 1.39
CMTM3-206ENST00000563672 SLC5A4Q9NY91 659 aa23.76■■□□□ 1.39
CMTM3-206ENST00000563672 RPTORQ8N122 1335 aa23.76■■□□□ 1.39
CMTM3-206ENST00000563672 RBBP6Q7Z6E9 1792 aaKnown RBP23.75■■□□□ 1.39
CMTM3-206ENST00000563672 GOLGA8HP0CJ92 632 aa23.75■■□□□ 1.39
CMTM3-206ENST00000563672 GJA8P48165 433 aa23.75■■□□□ 1.39
CMTM3-206ENST00000563672 SLC4A3P48751 1232 aa23.75■■□□□ 1.39
CMTM3-206ENST00000563672 CACNB2Q08289 660 aaPredicted RBP23.75■■□□□ 1.39
CMTM3-206ENST00000563672 OLFML2BQ68BL8 750 aa23.75■■□□□ 1.39
CMTM3-206ENST00000563672 CHST3Q7LGC8 479 aa23.75■■□□□ 1.39
CMTM3-206ENST00000563672 IGDCC4Q8TDY8 1250 aa23.75■■□□□ 1.39
CMTM3-206ENST00000563672 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.75■■□□□ 1.396e-8■■■■■ 50.5
CMTM3-206ENST00000563672 HMX1Q9NP08 348 aaPredicted RBP23.75■■□□□ 1.39
CMTM3-206ENST00000563672 FBXO40Q9UH90 709 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms