RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 HIPK3Q9H422 1215 aa22.01■■□□□ 1.11
E4F1-203ENST00000563643 CERS4Q9HA82 394 aa22.01■■□□□ 1.11
E4F1-203ENST00000563643 TNNQ9UQP3 1299 aa22.01■■□□□ 1.11
E4F1-203ENST00000563643 UMODL1Q5DID0 1318 aa22.01■■□□□ 1.11
E4F1-203ENST00000563643 EPOPA6NHQ4 379 aa22■■□□□ 1.11
E4F1-203ENST00000563643 DUSP11O75319 330 aaKnown RBP22■■□□□ 1.11
E4F1-203ENST00000563643 CA3P07451 260 aa22■■□□□ 1.11
E4F1-203ENST00000563643 ATP2A2P16615 1042 aaKnown RBP22■■□□□ 1.11
E4F1-203ENST00000563643 USP5P45974 858 aa21.99■■□□□ 1.11
E4F1-203ENST00000563643 SAMD1Q6SPF0 538 aaPredicted RBP21.99■■□□□ 1.11
E4F1-203ENST00000563643 TTC6Q86TZ1 520 aa21.99■■□□□ 1.11
E4F1-203ENST00000563643 CLUAP1Q96AJ1 413 aa21.99■■□□□ 1.11
E4F1-203ENST00000563643 ZHX1Q9UKY1 873 aaPredicted RBP21.99■■□□□ 1.11
E4F1-203ENST00000563643 HDAC5Q9UQL6 1122 aa21.99■■□□□ 1.11
E4F1-203ENST00000563643 ZBBXA8MT70 800 aa21.98■■□□□ 1.11
E4F1-203ENST00000563643 CCL23P55773 120 aa21.98■■□□□ 1.11
E4F1-203ENST00000563643 TMEM67Q5HYA8 995 aa21.98■■□□□ 1.11
E4F1-203ENST00000563643 MEIS3Q99687 375 aa21.98■■□□□ 1.11
E4F1-203ENST00000563643 MYH1P12882 1939 aa21.98■■□□□ 1.11
E4F1-203ENST00000563643 SRGAP3O43295 1099 aa21.97■■□□□ 1.11
E4F1-203ENST00000563643 CYP2E1P05181 493 aaPredicted RBP21.97■■□□□ 1.11
E4F1-203ENST00000563643 RIOX2Q8IUF8 465 aa21.97■■□□□ 1.11
E4F1-203ENST00000563643 SPICE1Q8N0Z3 855 aa21.97■■□□□ 1.11
E4F1-203ENST00000563643 MSL3Q8N5Y2 521 aaKnown RBP21.97■■□□□ 1.11
E4F1-203ENST00000563643 FBXL18Q96ME1 805 aa21.97■■□□□ 1.11
E4F1-203ENST00000563643 SPC25Q9HBM1 224 aa21.97■■□□□ 1.11
E4F1-203ENST00000563643 RCAN3Q9UKA8 241 aa21.97■■□□□ 1.11
E4F1-203ENST00000563643 MPHOSPH10O00566 681 aaKnown RBP21.96■■□□□ 1.11
E4F1-203ENST00000563643 SNAI1O95863 264 aaPredicted RBP21.96■■□□□ 1.11
E4F1-203ENST00000563643 GNAI3P08754 354 aa21.96■■□□□ 1.11
E4F1-203ENST00000563643 PLCD1P51178 756 aa21.96■■□□□ 1.11
E4F1-203ENST00000563643 FTSJ3Q8IY81 847 aaKnown RBP21.96■■□□□ 1.11
E4F1-203ENST00000563643 MIGA1Q8NAN2 632 aa21.96■■□□□ 1.11
E4F1-203ENST00000563643 ZNFX1Q9P2E3 1918 aaKnown RBP21.96■■□□□ 1.11
E4F1-203ENST00000563643 USP34Q70CQ2 3546 aa21.95■■□□□ 1.1
E4F1-203ENST00000563643 ADCY6O43306 1168 aa21.95■■□□□ 1.1
E4F1-203ENST00000563643 CYP7A1P22680 504 aa21.95■■□□□ 1.1
E4F1-203ENST00000563643 CSPP1Q1MSJ5 1256 aa21.95■■□□□ 1.1
E4F1-203ENST00000563643 GNASQ5JWF2 1037 aa21.95■■□□□ 1.1
E4F1-203ENST00000563643 GJD3Q8N144 294 aa21.95■■□□□ 1.1
E4F1-203ENST00000563643 TMEM57Q8N5G2 664 aa21.95■■□□□ 1.1
E4F1-203ENST00000563643 ARNTL2Q8WYA1 636 aa21.95■■□□□ 1.1
E4F1-203ENST00000563643 UPF3AQ9H1J1 476 aaKnown RBP21.95■■□□□ 1.1
E4F1-203ENST00000563643 WNT8AQ9H1J5 351 aa21.95■■□□□ 1.1
E4F1-203ENST00000563643 KCNH6Q9H252 994 aa21.95■■□□□ 1.1
E4F1-203ENST00000563643 GJA9P57773 515 aa21.94■■□□□ 1.1
E4F1-203ENST00000563643 TTC39AQ5SRH9 613 aa21.94■■□□□ 1.1
E4F1-203ENST00000563643 CERS3Q8IU89 383 aa21.94■■□□□ 1.1
E4F1-203ENST00000563643 RPUSD2Q8IZ73 545 aaKnown RBP21.94■■□□□ 1.1
E4F1-203ENST00000563643 VWCEQ96DN2 955 aa21.94■■□□□ 1.1
E4F1-203ENST00000563643 NOC4LQ9BVI4 516 aaKnown RBP21.94■■□□□ 1.1
E4F1-203ENST00000563643 IGSF3O75054 1194 aa21.93■■□□□ 1.1
E4F1-203ENST00000563643 MAMDC4Q6UXC1 1216 aa21.93■■□□□ 1.1
E4F1-203ENST00000563643 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
E4F1-203ENST00000563643 PIH1D3Q9NQM4 214 aaKnown RBP21.93■■□□□ 1.1
E4F1-203ENST00000563643 BRWD1Q9NSI6 2320 aa21.93■■□□□ 1.1
E4F1-203ENST00000563643 ADAMTS5Q9UNA0 930 aa21.93■■□□□ 1.1
E4F1-203ENST00000563643 RLBP1P12271 317 aa21.92■■□□□ 1.1
E4F1-203ENST00000563643 ALADP13716 330 aa21.92■■□□□ 1.1
E4F1-203ENST00000563643 STAT3P40763 770 aa21.92■■□□□ 1.1
E4F1-203ENST00000563643 GABPAQ06546 454 aa21.92■■□□□ 1.1
E4F1-203ENST00000563643 GRB10Q13322 594 aa21.92■■□□□ 1.1
E4F1-203ENST00000563643 SLC43A3Q8NBI5 491 aa21.92■■□□□ 1.1
E4F1-203ENST00000563643 ZNF214Q9UL59 606 aaPredicted RBP21.92■■□□□ 1.1
E4F1-203ENST00000563643 CTAGE5O15320 804 aa21.91■■□□□ 1.1
E4F1-203ENST00000563643 ARHGEF15O94989 841 aa21.91■■□□□ 1.1
E4F1-203ENST00000563643 COPB2P35606 906 aa21.91■■□□□ 1.1
E4F1-203ENST00000563643 TAP1Q03518 808 aa21.91■■□□□ 1.1
E4F1-203ENST00000563643 MTX1Q13505 466 aa21.91■■□□□ 1.1
E4F1-203ENST00000563643 ACVR2BQ13705 512 aa21.91■■□□□ 1.1
E4F1-203ENST00000563643 TTLL4Q14679 1199 aa21.91■■□□□ 1.1
E4F1-203ENST00000563643 FAM178BQ8IXR5 827 aa21.91■■□□□ 1.1
E4F1-203ENST00000563643 VCPKMTQ9H867 229 aa21.91■■□□□ 1.1
E4F1-203ENST00000563643 PARP14Q460N5 1801 aa21.9■■□□□ 1.1
E4F1-203ENST00000563643 WDR46O15213 610 aaKnown RBP21.9■■□□□ 1.1
E4F1-203ENST00000563643 MS4A1P11836 297 aa21.9■■□□□ 1.1
E4F1-203ENST00000563643 SSTR3P32745 418 aaPredicted RBP21.9■■□□□ 1.1
E4F1-203ENST00000563643 ZAP70P43403 619 aa21.9■■□□□ 1.1
E4F1-203ENST00000563643 CCDC144BQ3MJ40 725 aa21.9■■□□□ 1.1
E4F1-203ENST00000563643 TMEM179Q6ZVK1 233 aa21.9■■□□□ 1.1
E4F1-203ENST00000563643 CLEC10AQ8IUN9 316 aa21.9■■□□□ 1.1
E4F1-203ENST00000563643 SCLYQ96I15 445 aa21.9■■□□□ 1.1
E4F1-203ENST00000563643 FBXO28Q9NVF7 368 aa21.9■■□□□ 1.1
E4F1-203ENST00000563643 TMX2Q9Y320 296 aa21.9■■□□□ 1.1
E4F1-203ENST00000563643 CFAP54Q96N23 3096 aa21.89■■□□□ 1.1
E4F1-203ENST00000563643 VWA5AO00534 786 aa21.89■■□□□ 1.09
E4F1-203ENST00000563643 POLR3DP05423 398 aaPredicted RBP21.89■■□□□ 1.09
E4F1-203ENST00000563643 CCDC158Q5M9N0 1113 aa21.89■■□□□ 1.09
E4F1-203ENST00000563643 CXCL17Q6UXB2 119 aa21.89■■□□□ 1.09
E4F1-203ENST00000563643 TRPV6Q9H1D0 765 aa21.89■■□□□ 1.09
E4F1-203ENST00000563643 SH2D4AQ9H788 454 aa21.89■■□□□ 1.09
E4F1-203ENST00000563643 ARHGEF10LQ9HCE6 1279 aa21.89■■□□□ 1.09
E4F1-203ENST00000563643 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.89■■□□□ 1.09
E4F1-203ENST00000563643 COL11A1P12107 1806 aaPredicted RBP21.89■■□□□ 1.09
E4F1-203ENST00000563643 B4GALT4O60513 344 aa21.88■■□□□ 1.09
E4F1-203ENST00000563643 LPXNO60711 386 aa21.88■■□□□ 1.09
E4F1-203ENST00000563643 IDH1O75874 414 aaKnown RBP21.88■■□□□ 1.09
E4F1-203ENST00000563643 GNAI2P04899 355 aa21.88■■□□□ 1.09
E4F1-203ENST00000563643 PFKMP08237 780 aa21.88■■□□□ 1.09
E4F1-203ENST00000563643 BEX3Q00994 111 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms