RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ALG1Q9BT22 464 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 MYL10Q9BUA6 226 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 SENP2Q9HC62 589 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 STX8Q9UNK0 236 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 DDX49Q9Y6V7 483 aaKnown RBP11.23□□□□□ -0.61
UBFD1-202ENST00000563366 ELP1O95163 1332 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 SPDYE5A6NIY4 337 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
UBFD1-202ENST00000563366 SBF1O95248 1867 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 TOP1P11387 765 aaKnown RBP11.22□□□□□ -0.61
UBFD1-202ENST00000563366 RXRAP19793 462 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 TNNI2P48788 182 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 RESTQ13127 1097 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
UBFD1-202ENST00000563366 SAFBQ15424 915 aaKnown RBP eCLIP11.22□□□□□ -0.61
UBFD1-202ENST00000563366 RCSD1Q6JBY9 416 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 TMTC3Q6ZXV5 915 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 RAB11FIP4Q86YS3 637 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 ZSCAN29Q8IWY8 852 aaPredicted RBP11.22□□□□□ -0.61
UBFD1-202ENST00000563366 SLC44A5Q8NCS7 719 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 DPF2Q92785 391 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 SYAP1Q96A49 352 aaPredicted RBP11.22□□□□□ -0.61
UBFD1-202ENST00000563366 SLC26A6Q9BXS9 759 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 KRTAP3-3Q9BYR6 98 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 KRTAP3-2Q9BYR7 98 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 TDRD3Q9H7E2 651 aaKnown RBP11.22□□□□□ -0.61
UBFD1-202ENST00000563366 LMBRD1Q9NUN5 540 aa11.22□□□□□ -0.61
UBFD1-202ENST00000563366 HERC5Q9UII4 1024 aaKnown RBP11.22□□□□□ -0.61
UBFD1-202ENST00000563366 FZD9O00144 591 aa11.21□□□□□ -0.61
UBFD1-202ENST00000563366 PRPF3O43395 683 aaKnown RBP11.21□□□□□ -0.61
UBFD1-202ENST00000563366 PRPF40AO75400 957 aaKnown RBP11.21□□□□□ -0.61
UBFD1-202ENST00000563366 NOVP48745 357 aa11.21□□□□□ -0.61
UBFD1-202ENST00000563366 NFIAQ12857 509 aa11.21□□□□□ -0.61
UBFD1-202ENST00000563366 TNFAIP1Q13829 316 aa11.21□□□□□ -0.61
UBFD1-202ENST00000563366 FERMT3Q86UX7 667 aa11.21□□□□□ -0.61
UBFD1-202ENST00000563366 METTL16Q86W50 562 aaKnown RBP11.21□□□□□ -0.61
UBFD1-202ENST00000563366 FAM151AQ8WW52 585 aa11.21□□□□□ -0.61
UBFD1-202ENST00000563366 PHKBQ93100 1093 aa11.21□□□□□ -0.61
UBFD1-202ENST00000563366 PRMT6Q96LA8 375 aaPredicted RBP11.21□□□□□ -0.61
UBFD1-202ENST00000563366 IL17RBQ9NRM6 502 aa11.21□□□□□ -0.61
UBFD1-202ENST00000563366 TSR3Q9UJK0 312 aaKnown RBP11.21□□□□□ -0.61
UBFD1-202ENST00000563366 NMT2O60551 498 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 TTLL1O95922 423 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 SMARCA1P28370 1054 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 ZNF280AP59817 542 aaPredicted RBP11.2□□□□□ -0.62
UBFD1-202ENST00000563366 UBE2HP62256 183 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
UBFD1-202ENST00000563366 MTMR2Q13614 643 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 GRM4Q14833 912 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 TATDN1Q6P1N9 297 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 NLGN2Q8NFZ4 835 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 CSRNP1Q96S65 589 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 TMEM47Q9BQJ4 181 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 BRMS1Q9HCU9 246 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 MYOZ2Q9NPC6 264 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 MTMR4Q9NYA4 1195 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 SYNPO2Q9UMS6 1093 aa11.2□□□□□ -0.62
UBFD1-202ENST00000563366 CNTNAP5Q8WYK1 1306 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 IGKV6D-41A0A0C4DH26 115 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 GOLGA6L4A6NEF3 574 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 FIBPO43427 364 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 AP1G2O75843 785 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 LMNB1P20700 586 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 SHMT1P34896 483 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 TCP10Q12799 353 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 CERKLQ49MI3 558 aaPredicted RBP11.19□□□□□ -0.62
UBFD1-202ENST00000563366 ASPRV1Q53RT3 343 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 KRT40Q6A162 431 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 TMEM179Q6ZVK1 233 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 SPATA32Q96LK8 384 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 KANSL2Q9H9L4 492 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 ZNF70Q9UC06 446 aaPredicted RBP11.19□□□□□ -0.62
UBFD1-202ENST00000563366 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
UBFD1-202ENST00000563366 CNPY2Q9Y2B0 182 aa11.19□□□□□ -0.62
UBFD1-202ENST00000563366 DDTLA6NHG4 134 aaPredicted RBP11.18□□□□□ -0.62
UBFD1-202ENST00000563366 hCG_1984214I3L0E3 225 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 MPHOSPH10O00566 681 aaKnown RBP11.18□□□□□ -0.62
UBFD1-202ENST00000563366 MMP1P03956 469 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 PARP1P09874 1014 aaKnown RBP11.18□□□□□ -0.62
UBFD1-202ENST00000563366 CACNB3P54284 484 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 KIF23Q02241 960 aaPredicted RBP11.18□□□□□ -0.62
UBFD1-202ENST00000563366 RASSF7Q02833 373 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 PUS10Q3MIT2 529 aaKnown RBP11.18□□□□□ -0.62
UBFD1-202ENST00000563366 GPATCH4Q5T3I0 446 aaKnown RBP11.18□□□□□ -0.62
UBFD1-202ENST00000563366 USP48Q86UV5 1035 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 ZNF713Q8N859 430 aaPredicted RBP11.18□□□□□ -0.62
UBFD1-202ENST00000563366 CCDC148Q8NFR7 591 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 HOOK2Q96ED9 719 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 ZBED3Q96IU2 234 aaPredicted RBP11.18□□□□□ -0.62
UBFD1-202ENST00000563366 SPZ1Q9BXG8 430 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 FHDC1Q9C0D6 1143 aaPredicted RBP11.18□□□□□ -0.62
UBFD1-202ENST00000563366 FOXP1Q9H334 677 aaPredicted RBP11.18□□□□□ -0.62
UBFD1-202ENST00000563366 CABP5Q9NP86 173 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 SH3GLB2Q9NR46 395 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 ATAD5Q96QE3 1844 aa11.18□□□□□ -0.62
UBFD1-202ENST00000563366 H7C1D1 291 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms