RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 USP17L24Q0WX57 530 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 FAM110CQ1W6H9 321 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 LBX2Q6XYB7 198 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 CLIP2Q9UDT6 1046 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 F5H6K3 240 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 WDR46O15213 610 aaKnown RBP7.31□□□□□ -1.24
CNOT1-204ENST00000563130 COL9A1P20849 921 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 CTGFP29279 349 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 HERVK_113P62684 666 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 LACTBP83111 547 aaPredicted RBP7.31□□□□□ -1.24
CNOT1-204ENST00000563130 KLRC3Q07444 240 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 NECTIN1Q15223 517 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 RCSD1Q6JBY9 416 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 GMCL1P1Q8NEA9 526 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 SMCR8Q8TEV9 937 aaPredicted RBP7.31□□□□□ -1.24
CNOT1-204ENST00000563130 ESR2Q92731 530 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 ERO1AQ96HE7 468 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 RPAP3Q9H6T3 665 aaPredicted RBP7.31□□□□□ -1.24
CNOT1-204ENST00000563130 RBPJLQ9UBG7 517 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 MORF4L1Q9UBU8 362 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 RBM8AQ9Y5S9 174 aaKnown RBP7.31□□□□□ -1.24
CNOT1-204ENST00000563130 TAF6LQ9Y6J9 622 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 NDUFB10O96000 172 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 IRX3P78415 501 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-204ENST00000563130 ATP2B2Q01814 1243 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 RRP12Q5JTH9 1297 aaKnown RBP7.3□□□□□ -1.24
CNOT1-204ENST00000563130 CASC1Q6TDU7 716 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 KIAA1211Q6ZU35 1233 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 CTU1Q7Z7A3 348 aaKnown RBP7.3□□□□□ -1.24
CNOT1-204ENST00000563130 SPICE1Q8N0Z3 855 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 ANKRD13CQ8N6S4 541 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 CD99L2Q8TCZ2 262 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 TTC14Q96N46 770 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 ZBED2Q9BTP6 218 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 GOPCQ9HD26 462 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 TXNRD2Q9NNW7 524 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 TOMM22Q9NS69 142 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 ZSWIM5Q9P217 1185 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 ADAMTS5Q9UNA0 930 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 RLFQ13129 1914 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 B4E1Z4 1266 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 KDM4AO75164 1064 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 COG2Q14746 738 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 STOX1Q6ZVD7 989 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 OTOP1Q7RTM1 612 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 DGKHQ86XP1 1220 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 GTF3C2Q8WUA4 911 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-204ENST00000563130 ANKS1AQ92625 1134 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 KRT23Q9C075 422 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 ARHGAP39Q9C0H5 1083 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 CNNM2Q9H8M5 875 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 ANO2Q9NQ90 1003 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 STX8Q9UNK0 236 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 MYPNQ86TC9 1320 aa7.3□□□□□ -1.24
CNOT1-204ENST00000563130 E7EWF7 191 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 CNMDO75829 334 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 GNRH1P01148 92 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 ADGRD1Q6QNK2 874 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 LRRC47Q8N1G4 583 aaKnown RBP7.29□□□□□ -1.24
CNOT1-204ENST00000563130 GMCL1Q96IK5 515 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 TMEM47Q9BQJ4 181 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 HOXC10Q9NYD6 342 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 RABGAP1Q9Y3P9 1069 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 MYH4Q9Y623 1939 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 SLC27A2O14975 620 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 PEX10O60683 326 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 TOP1P11387 765 aaKnown RBP7.29□□□□□ -1.24
CNOT1-204ENST00000563130 PKN2Q16513 984 aaKnown RBP7.29□□□□□ -1.24
CNOT1-204ENST00000563130 Q3C1V9 767 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 TSGA10IPQ3SY00 556 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 FAM83BQ5T0W9 1011 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 SLFN13Q68D06 897 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 IQCA1Q86XH1 822 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 TRIM47Q96LD4 638 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 TANGO6Q9C0B7 1094 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 MCOLN1Q9GZU1 580 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 EFCC1Q9HA90 598 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 CDHR5Q9HBB8 845 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 FBXO28Q9NVF7 368 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 VPS9D1Q9Y2B5 631 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 TRIM17Q9Y577 477 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 HTTP42858 3142 aa7.29□□□□□ -1.24
CNOT1-204ENST00000563130 PARP14Q460N5 1801 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 A0A0G2JMZ2 1700 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 EPB41L2O43491 1005 aaKnown RBP7.28□□□□□ -1.24
CNOT1-204ENST00000563130 FLOT1O75955 427 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 SNHG28P0DPA3 235 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 PSMC4P43686 418 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 ERVK-9P63128 1117 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 ERVK-24P63145 666 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 SEC23AQ15436 765 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 CCDC178Q5BJE1 867 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 CREB3L3Q68CJ9 461 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 CYB5R4Q7L1T6 521 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 MB21D2Q8IYB1 491 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-204ENST00000563130 MB21D1Q8N884 522 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 ENAHQ8N8S7 591 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-204ENST00000563130 GPRC5AQ8NFJ5 357 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 NCOA7Q8NI08 942 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 KCNB2Q92953 911 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms