RNA–Protein interactions for RNA: ENST00000562946.5

TMEM87A-205, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-205ENST00000562946 STAG1Q8WVM7 1258 aa10.39□□□□□ -0.75
TMEM87A-205ENST00000562946 TRIB2Q92519 343 aa10.39□□□□□ -0.75
TMEM87A-205ENST00000562946 RNF208Q9H0X6 261 aa10.39□□□□□ -0.75
TMEM87A-205ENST00000562946 UNC93B1Q9H1C4 597 aa10.39□□□□□ -0.75
TMEM87A-205ENST00000562946 SLC15A5A6NIM6 579 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 ZNF213O14771 459 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 HMGCRP04035 888 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 GJB1P08034 283 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 PCP11498 1178 aaKnown RBP10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 ERCC3P19447 782 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 TRIM32Q13049 653 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 MAP2K5Q13163 448 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 GRB14Q14449 540 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 RRP12Q5JTH9 1297 aaKnown RBP10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 PPP4R3BQ5MIZ7 849 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 WDR78Q5VTH9 848 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 SLFN13Q68D06 897 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 MFSD6Q6ZSS7 791 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 SLF1Q9BQI6 1058 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 TOMM22Q9NS69 142 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 TCP11L1Q9NUJ3 509 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 ZNF214Q9UL59 606 aaPredicted RBP10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 STX8Q9UNK0 236 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 FRMPD3Q5JV73 1810 aa10.38□□□□□ -0.75
TMEM87A-205ENST00000562946 RAD50Q92878 1312 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 MCM3APO60318 1980 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 MYH6P13533 1939 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 STRNO43815 780 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 BMP3P12645 472 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 RGS2P41220 211 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 GJA8P48165 433 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 PLS1Q14651 629 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 CCL14Q16627 93 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 MAP3K21Q5TCX8 1036 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 RCSD1Q6JBY9 416 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 SKAP1Q86WV1 359 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 PRPF38AQ8NAV1 312 aaKnown RBP10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 SHISA4Q96DD7 197 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 GMCL1Q96IK5 515 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 APBA2Q99767 749 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 RNF41Q9H4P4 317 aaPredicted RBP10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 MROH8Q9H579 483 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 PAK6Q9NQU5 681 aaPredicted RBP10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 IVNS1ABPQ9Y6Y0 642 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 NEDD4P46934 1319 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 RPTORQ8N122 1335 aa10.37□□□□□ -0.75
TMEM87A-205ENST00000562946 SGPL1O95470 568 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 SLC25A27O95847 323 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 IGHA2P01877 340 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 HOXC6P09630 235 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 MCCP23508 829 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 STAT3P40763 770 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 NCAPG2Q86XI2 1143 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 RIOX2Q8IUF8 465 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 TRMT44Q8IYL2 757 aaKnown RBP10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 EFCAB3Q8N7B9 438 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 NPLOC4Q8TAT6 608 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 U2AF1L4Q8WU68 220 aaKnown RBP10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 RUFY2Q8WXA3 655 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 FLRT1Q9NZU1 646 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 CTNNA3Q9UI47 895 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 FEM1BQ9UK73 627 aa10.36□□□□□ -0.75
TMEM87A-205ENST00000562946 ATP2A1O14983 1001 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 SGSM2O43147 1006 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 PLA2G6O60733 806 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 COBLO75128 1261 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 TOP1P11387 765 aaKnown RBP10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 ZKSCAN1P17029 563 aaPredicted RBP10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 ADORA2AP29274 412 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 SLC1A4P43007 532 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 PTH1RQ03431 593 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 CACNB2Q08289 660 aaPredicted RBP10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 IMMTQ16891 758 aaKnown RBP10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 RASGRP2Q7LDG7 609 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 ABRAQ8N0Z2 381 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 ESR2Q92731 530 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 KIFC2Q96AC6 838 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 TTC14Q96N46 770 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 DEFB118Q96PH6 123 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 TMEM47Q9BQJ4 181 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 SLC38A10Q9HBR0 1119 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 HMX1Q9NP08 348 aaPredicted RBP10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 RIPK3Q9Y572 518 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 ALPK3Q96L96 1907 aa10.35□□□□□ -0.75
TMEM87A-205ENST00000562946 B4E1Z4 1266 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 TMEM232C9JQI7 657 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 KDM4AO75164 1064 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 NT5C2P49902 561 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 KCTD1Q719H9 257 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 UBE2Q1Q7Z7E8 422 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 FAM160B2Q86V87 743 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 CHURC1Q8WUH1 139 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 CHMP4CQ96CF2 233 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 ZKSCAN3Q9BRR0 538 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 TEX13BQ9BXU2 312 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 CRISPLD2Q9H0B8 497 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 ZSWIM5Q9P217 1185 aa10.34□□□□□ -0.75
TMEM87A-205ENST00000562946 ZBED4O75132 1171 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms