RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 TSPY3P0CV98 308 aa13.15□□□□□ -0.3
KLHDC4-209ENST00000562872 TSPY8P0CW00 308 aa13.15□□□□□ -0.3
KLHDC4-209ENST00000562872 ATN1P54259 1190 aaPredicted RBP13.15□□□□□ -0.3
KLHDC4-209ENST00000562872 CPXCR1Q8N123 301 aa13.15□□□□□ -0.3
KLHDC4-209ENST00000562872 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
KLHDC4-209ENST00000562872 EVI5LQ96CN4 794 aa13.15□□□□□ -0.3
KLHDC4-209ENST00000562872 LRCH3Q96II8 777 aa13.15□□□□□ -0.3
KLHDC4-209ENST00000562872 SENP6Q9GZR1 1112 aaPredicted RBP13.15□□□□□ -0.3
KLHDC4-209ENST00000562872 RAVER2Q9HCJ3 691 aaKnown RBP13.15□□□□□ -0.3
KLHDC4-209ENST00000562872 IL17RBQ9NRM6 502 aa13.15□□□□□ -0.3
KLHDC4-209ENST00000562872 DNM1LO00429 736 aa13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 SEPT4O43236 478 aa13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 PDE4BQ07343 736 aa13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 SLFN13Q68D06 897 aa13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 SMC5Q8IY18 1101 aa13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 GMCL1P1Q8NEA9 526 aa13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 FGD4Q96M96 766 aa13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 TEX13BQ9BXU2 312 aa13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 SLC38A10Q9HBR0 1119 aa13.14□□□□□ -0.31
KLHDC4-209ENST00000562872 ZNFX1Q9P2E3 1918 aaKnown RBP13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 PLXNA1Q9UIW2 1896 aa13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 DNAJC25-GNG10A0A024R161 153 aa13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 MSCO60682 206 aa13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 ZNF865P0CJ78 1059 aaPredicted RBP13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 SNAP25P60880 206 aa13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 KCTD2Q14681 263 aa13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 PRPF38AQ8NAV1 312 aaKnown RBP13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 TINF2Q9BSI4 451 aa13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 ZNF287Q9HBT7 754 aa13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
KLHDC4-209ENST00000562872 ATP2A1O14983 1001 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 FGAP02671 866 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 BMP3P12645 472 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 MCCP23508 829 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 RTP1P59025 263 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 MDM2Q00987 491 aaPredicted RBP13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 LRRC41Q15345 812 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 PLEKHM2Q8IWE5 1019 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 HELLSQ9NRZ9 838 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 SLC5A4Q9NY91 659 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 ANAPC4Q9UJX5 808 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 FEM1BQ9UK73 627 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 MTMR7Q9Y216 660 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 ZNF536O15090 1300 aa13.12□□□□□ -0.31
KLHDC4-209ENST00000562872 TSPY2A6NKD2 308 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 TMEM232C9JQI7 657 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 ADCY6O43306 1168 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 ZBED4O75132 1171 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 SNAI1O95863 264 aaPredicted RBP13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 PGK1P00558 417 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 HSPD1P10809 573 aaKnown RBP13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 BMP8BP34820 402 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 ADCYAP1R1P41586 468 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 HAND2P61296 217 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 IRX5P78411 483 aaPredicted RBP13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 ALX1Q15699 326 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 MCMDC2Q4G0Z9 681 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 CHD1LQ86WJ1 897 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 TBC1D10CQ8IV04 446 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 FERMT2Q96AC1 680 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 AGBL1Q96MI9 1066 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 ISY1Q9ULR0 285 aaKnown RBP13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 DIS3Q9Y2L1 958 aaKnown RBP13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
KLHDC4-209ENST00000562872 A0A1W2PPC1 479 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 ORC4O43929 436 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 FGRP09769 529 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 COPB2P35606 906 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 NOVP48745 357 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 NUCB1Q02818 461 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 RRP12Q5JTH9 1297 aaKnown RBP13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 RILPL2Q969X0 211 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 GMCL1Q96IK5 515 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 XPNPEP3Q9NQH7 507 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 SMCHD1A6NHR9 2005 aa13.1□□□□□ -0.31
KLHDC4-209ENST00000562872 LTBP2Q14767 1821 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 MYADML2A6NDP7 307 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 KBTBD13C9JR72 458 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 ADAMTS4O75173 837 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 SLC1A4P43007 532 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 CNTN2Q02246 1040 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 TTBK2Q6IQ55 1244 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 SLC39A5Q6ZMH5 540 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 ARRDC4Q8NCT1 418 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 STAG1Q8WVM7 1258 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 DDX11Q96FC9 970 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms