RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 DTHD1Q6ZMT9 781 aa24.23■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 RASGRP4Q8TDF6 673 aa24.23■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 DDX4Q9NQI0 724 aaKnown RBP24.23■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 BAZ2BQ9UIF8 2168 aaKnown RBP24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 ESYT2A0FGR8 921 aa24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 SCNN1DP51172 638 aa24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 CCZ1BP86790 482 aa24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 CCZ1P86791 482 aaPredicted RBP24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 HDLBPQ00341 1268 aaKnown RBP24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 ARID5BQ14865 1188 aa24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 E2F4Q16254 413 aa24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 CFAP100Q494V2 611 aa24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 MSL1Q68DK7 614 aa24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 RIOX1Q9H6W3 641 aa24.22■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 USP17L5A8MUK1 530 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 TTLL1O95922 423 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 PDHBP11177 359 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 AKR1B1P15121 316 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 SFPQP23246 707 aaKnown RBP eCLIP24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 PRPHP41219 470 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 CRKP46108 304 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 IL17AQ16552 155 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 APOBEC3HQ6NTF7 200 aaKnown RBP24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 MYRIPQ8NFW9 859 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 ZDHHC15Q96MV8 337 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 MXD3Q9BW11 206 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 EHD4Q9H223 541 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 SMCO2A6NFE2 343 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 ORC2Q13416 577 aaPredicted RBP24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 NONOQ15233 471 aaKnown RBP eCLIP24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 STRIP1Q5VSL9 837 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 CNKSR1Q969H4 720 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 KCND1Q9NSA2 647 aa24.21■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 DYNC1I1O14576 645 aa24.2■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 GTPBP6O43824 516 aaPredicted RBP24.2■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 TPD52L1Q16890 204 aaPredicted RBP24.2■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 INF2Q27J81 1249 aa24.2■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 PDXDC2PQ6P474 469 aa24.2■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 HOMER1Q86YM7 354 aa24.2■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 NFE2L3Q9Y4A8 694 aa24.2■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 TNS1Q9HBL0 1735 aaKnown RBP24.2■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 SNHG28P0DPA3 235 aa24.19■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 ZNF18P17022 549 aa24.19■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 CDK11BP21127 795 aaKnown RBP24.19■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 FMR1Q06787 632 aaKnown RBP eCLIP24.19■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 CCDC17Q96LX7 622 aa24.19■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 DBNDD1Q9H9R9 158 aa24.19■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 VSTM4Q8IW00 320 aa24.19■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 PIGSQ96S52 555 aa24.19■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 DHX36Q9H2U1 1008 aaKnown RBP24.19■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 RMND1Q9NWS8 449 aa24.19■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 MYH8P13535 1937 aa24.18■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 SHMT1P34896 483 aa24.18■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 KCNJ6P48051 423 aa24.18■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 CPVLQ9H3G5 476 aa24.18■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 VAT1LQ9HCJ6 419 aa24.18■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 SPATA1Q5VX52 437 aa24.17■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 ARMCX5Q6P1M9 558 aa24.17■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 RASGRP2Q7LDG7 609 aa24.17■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 DPF2Q92785 391 aa24.17■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 ECE2O60344 883 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 STAT6P42226 847 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 CC2D2BQ6DHV5 1058 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 REXO1Q8N1G1 1221 aaKnown RBP24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 LRRC47Q8N1G4 583 aaKnown RBP24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 CCDC112Q8NEF3 446 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 AK8Q96MA6 479 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 CCSER1Q9C0I3 900 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 SYNRGQ9UMZ2 1314 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 NPM3O75607 178 aaKnown RBP24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 UBA7P41226 1012 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 SEMA3FQ13275 785 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 DACT2Q5SW24 774 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 PPP1R18Q6NYC8 613 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 NEK8Q86SG6 692 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 UBA5Q9GZZ9 404 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 DISC1Q9NRI5 854 aa24.16■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 FRMPD2Q68DX3 1309 aaPredicted RBP24.15■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 MYL1P05976 194 aa24.15■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 ZNF543Q08ER8 600 aa24.15■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 CUL4BQ13620 913 aa24.15■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 GPATCH4Q5T3I0 446 aaKnown RBP24.15■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 TRMT44Q8IYL2 757 aaKnown RBP24.15■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 SUPT20HQ8NEM7 779 aa24.15■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 ANO8Q9HCE9 1232 aaPredicted RBP24.15■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 OR52Z1P0C646 297 aa24.14■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 TNNT1P13805 278 aa24.14■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 GTF2F1P35269 517 aaKnown RBP eCLIP24.14■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 RRAGBQ5VZM2 374 aa24.14■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 RASSF8Q8NHQ8 419 aa24.14■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 C16orf45Q96MC5 204 aaPredicted RBP24.14■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 IDI2Q9BXS1 227 aa24.14■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 TMEM60Q9H2L4 133 aa24.14■■□□□ 1.46
VPS9D1-AS1-202ENST00000562866 ADAMTSL1Q8N6G6 1762 aa24.14■■□□□ 1.45
VPS9D1-AS1-202ENST00000562866 ADCY7P51828 1080 aa24.14■■□□□ 1.45
VPS9D1-AS1-202ENST00000562866 KIAA0825Q8IV33 1275 aa24.14■■□□□ 1.45
VPS9D1-AS1-202ENST00000562866 CCAR2Q8N163 923 aaKnown RBP24.14■■□□□ 1.45
VPS9D1-AS1-202ENST00000562866 CUEDC2Q9H467 287 aa24.14■■□□□ 1.45
VPS9D1-AS1-202ENST00000562866 MAGEF1Q9HAY2 307 aa24.14■■□□□ 1.45
VPS9D1-AS1-202ENST00000562866 STK32BQ9NY57 414 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms