RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PDAP1Q13442 181 aaKnown RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 PROSER3Q2NL68 480 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 PRPF40BQ6NWY9 871 aaKnown RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 MCF2L2Q86YR7 1114 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 FAM9CQ8IZT9 166 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 RNF10Q8N5U6 811 aaKnown RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 TMEM87AQ8NBN3 555 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 GALNT6Q8NCL4 622 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 NUP58Q9BVL2 599 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 EIF2AQ9BY44 585 aaKnown RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 SEMA4AQ9H3S1 761 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 FAM204AQ9H8W3 233 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 HPS4Q9NQG7 708 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 SUCLA2Q9P2R7 463 aaPredicted RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 NOSIPQ9Y314 301 aaKnown RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 VARSP26640 1264 aaKnown RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 ALDH3A1P30838 453 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 CETN2P41208 172 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 PKP1Q13835 747 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 BLMHQ13867 455 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 ACAP1Q15027 740 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 TSHZ3Q63HK5 1081 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 NEK5Q6P3R8 708 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 BRAPQ7Z569 592 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 BRSK1Q8TDC3 778 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 ZNF653Q96CK0 615 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 NAP1L4Q99733 375 aaKnown RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 PUS3Q9BZE2 481 aaKnown RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 UPF3BQ9BZI7 483 aaKnown RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 PARVGQ9HBI0 331 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 LAMC3Q9Y6N6 1575 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 URB2Q14146 1524 aaKnown RBP10.4□□□□□ -0.74
CDH1-205ENST00000562836 CCDC166P0CW27 439 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 GZMAP12544 262 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 ADCY8P40145 1251 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 PDE4DQ08499 809 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 STK11Q15831 433 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 C1orf228Q6PIY5 440 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 RPGRIP1Q96KN7 1286 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 FKBP14Q9NWM8 211 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 RASSF10A6NK89 507 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 K7ELQ4 463 aaPredicted RBP10.4□□□□□ -0.74
CDH1-205ENST00000562836 BUB1BO60566 1050 aaPredicted RBP10.4□□□□□ -0.74
CDH1-205ENST00000562836 PRKACBP22694 351 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 CEBPZQ03701 1054 aaKnown RBP10.4□□□□□ -0.74
CDH1-205ENST00000562836 LONRF2Q1L5Z9 754 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 WDR45BQ5MNZ6 344 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 CFAP70Q5T0N1 1121 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 NEPROQ6NW34 567 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 ERICH1Q86X53 443 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 STAMBPL1Q96FJ0 436 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 PFDN4Q9NQP4 134 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 DDX21Q9NR30 783 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDH1-205ENST00000562836 CHIC2Q9UKJ5 165 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 SAMM50Q9Y512 469 aa10.4□□□□□ -0.74
CDH1-205ENST00000562836 ERBINQ96RT1 1412 aa10.4□□□□□ -0.75
CDH1-205ENST00000562836 ITIH6Q6UXX5 1313 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 ARPC4-TTLL3A0A0A6YYG9 625 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 DPPA5A6NC42 116 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 LIN7AO14910 233 aaPredicted RBP10.39□□□□□ -0.75
CDH1-205ENST00000562836 TBC1D12O60347 775 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 B4GALT4O60513 344 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 ETV3P41162 512 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 NMIQ13287 307 aaPredicted RBP10.39□□□□□ -0.75
CDH1-205ENST00000562836 PPP2R5CQ13362 524 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 SPERTQ8NA61 448 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 HNRNPABQ99729 332 aaKnown RBP10.39□□□□□ -0.75
CDH1-205ENST00000562836 FAM167BQ9BTA0 163 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 MOSPD1Q9UJG1 213 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 MAP2K7O14733 419 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 CCDC192P0DO97 292 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 STAT3P40763 770 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 MTTPP55157 894 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 CYB5D1Q6P9G0 228 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 ABTB2Q8N961 1025 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 RASSF8Q8NHQ8 419 aa10.39□□□□□ -0.75
CDH1-205ENST00000562836 GOLGA8IPA6NC78 632 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 SPDYE5A6NIY4 337 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 TTLL13PA6NNM8 815 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 LRRIQ3A6PVS8 624 aaPredicted RBP10.38□□□□□ -0.75
CDH1-205ENST00000562836 AKR1B15C9JRZ8 316 aaPredicted RBP10.38□□□□□ -0.75
CDH1-205ENST00000562836 AMPHP49418 695 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 PDE3BQ13370 1112 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 GRAMD4Q6IC98 578 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 TBC1D9Q6ZT07 1266 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 CCDC89Q8N998 374 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 CCDC110Q8TBZ0 833 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 CCDC127Q96BQ5 260 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.38□□□□□ -0.75
CDH1-205ENST00000562836 CLK4Q9HAZ1 481 aaKnown RBP10.38□□□□□ -0.75
CDH1-205ENST00000562836 CLIC5Q9NZA1 410 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 LRRD1A4D1F6 860 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 AP3B1O00203 1094 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 VAMP4O75379 141 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 SKIP12755 728 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 IGSF11Q5DX21 431 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 LZICQ8WZA0 190 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 TSR2Q969E8 191 aaKnown RBP10.38□□□□□ -0.75
CDH1-205ENST00000562836 ZNF570Q96NI8 536 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms