RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 RNF20Q5VTR2 975 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 GPR142Q7Z601 462 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 NCAPG2Q86XI2 1143 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 DGKHQ86XP1 1220 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 CCAR1Q8IX12 1150 aaKnown RBP13.15□□□□□ -0.3
TSC2-218ENST00000562474 CCDC144CPQ8IYA2 1237 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.3
TSC2-218ENST00000562474 HOMER2Q9NSB8 354 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 HOXC10Q9NYD6 342 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 SRRDQ9UH36 339 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 FEM1BQ9UK73 627 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 PRR12Q9ULL5 1215 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 HPS5Q9UPZ3 1129 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 ZNF236Q9UL36 1845 aa13.15□□□□□ -0.3
TSC2-218ENST00000562474 SH2B2O14492 632 aaPredicted RBP13.14□□□□□ -0.31
TSC2-218ENST00000562474 CYP2B6P20813 491 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 STAT2P52630 851 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 ZNF543Q08ER8 600 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 SNRNP48Q6IEG0 339 aaKnown RBP13.14□□□□□ -0.31
TSC2-218ENST00000562474 FBXO46Q6PJ61 603 aaPredicted RBP13.14□□□□□ -0.31
TSC2-218ENST00000562474 IGDCC4Q8TDY8 1250 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
TSC2-218ENST00000562474 NUP133Q8WUM0 1156 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 TTC14Q96N46 770 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 NEK1Q96PY6 1258 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 USP26Q9BXU7 913 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 LY9Q9HBG7 655 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 ZNF214Q9UL59 606 aaPredicted RBP13.14□□□□□ -0.31
TSC2-218ENST00000562474 RIPK3Q9Y572 518 aa13.14□□□□□ -0.31
TSC2-218ENST00000562474 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
TSC2-218ENST00000562474 ERICH2A1L162 156 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 ZKSCAN1P17029 563 aaPredicted RBP13.13□□□□□ -0.31
TSC2-218ENST00000562474 MCM5P33992 734 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 TRIM32Q13049 653 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 SYDE2Q5VT97 1194 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 NFXL1Q6ZNB6 911 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 PLEKHH3Q7Z736 793 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 PRPF38AQ8NAV1 312 aaKnown RBP13.13□□□□□ -0.31
TSC2-218ENST00000562474 RAET1EQ8TD07 263 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 ANKS1AQ92625 1134 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 COA7Q96BR5 231 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 AGBL1Q96MI9 1066 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 VAT1LQ9HCJ6 419 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 SYNPO2Q9UMS6 1093 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 ADAMTS5Q9UNA0 930 aa13.13□□□□□ -0.31
TSC2-218ENST00000562474 CCDC85CA6NKD9 419 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 DHX16O60231 1041 aaKnown RBP13.12□□□□□ -0.31
TSC2-218ENST00000562474 ZBED4O75132 1171 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 SNHG28P0DPA3 235 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 STAT3P40763 770 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 CCNA1P78396 465 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 CCL14Q16627 93 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 CCDC178Q5BJE1 867 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 FAM160B2Q86V87 743 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 ZNF654Q8IZM8 581 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
TSC2-218ENST00000562474 SLC38A10Q9HBR0 1119 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 NAP1L2Q9ULW6 460 aaPredicted RBP13.12□□□□□ -0.31
TSC2-218ENST00000562474 ZNF536O15090 1300 aa13.12□□□□□ -0.31
TSC2-218ENST00000562474 PGK2P07205 417 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 PARP1P09874 1014 aaKnown RBP13.11□□□□□ -0.31
TSC2-218ENST00000562474 ALAS1P13196 640 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 CASTP20810 708 aaKnown RBP13.11□□□□□ -0.31
TSC2-218ENST00000562474 MAPK4P31152 587 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 SOX10P56693 466 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 SART3Q15020 963 aaKnown RBP13.11□□□□□ -0.31
TSC2-218ENST00000562474 SLC9C1Q4G0N8 1177 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 NBPF11Q86T75 865 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 RIOX2Q8IUF8 465 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 CMTR1Q8N1G2 835 aaKnown RBP13.11□□□□□ -0.31
TSC2-218ENST00000562474 MB21D1Q8N884 522 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 CHURC1Q8WUH1 139 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 KCNB2Q92953 911 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 UPF3BQ9BZI7 483 aaKnown RBP13.11□□□□□ -0.31
TSC2-218ENST00000562474 BIN2Q9UBW5 565 aaPredicted RBP13.11□□□□□ -0.31
TSC2-218ENST00000562474 MAD2L2Q9UI95 211 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 GJD2Q9UKL4 321 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 BRPF3Q9ULD4 1205 aa13.11□□□□□ -0.31
TSC2-218ENST00000562474 CCDC69A6NI79 296 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 ADCY3O60266 1144 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 PTPREP23469 700 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 HOXD10P28358 340 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 EXOSC10Q01780 885 aaKnown RBP13.1□□□□□ -0.31
TSC2-218ENST00000562474 GRM4Q14833 912 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 ARHGEF6Q15052 776 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 MTFR1Q15390 333 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 USH1GQ495M9 461 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 MUM1L1Q5H9M0 696 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 MORN1Q5T089 497 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 Q6ZUG5 572 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 DHX32Q7L7V1 743 aaKnown RBP13.1□□□□□ -0.31
TSC2-218ENST00000562474 MICU3Q86XE3 530 aa13.1□□□□□ -0.31
TSC2-218ENST00000562474 NPLOC4Q8TAT6 608 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms