RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 GINM1Q9NU53 330 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 SEC63Q9UGP8 760 aaKnown RBP10.93□□□□□ -0.66
CDH13-205ENST00000562307 NOL7Q9UMY1 257 aaKnown RBP10.93□□□□□ -0.66
CDH13-205ENST00000562307 PCDHB6Q9Y5E3 794 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 MYH6P13533 1939 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 A0A1W2PRG0 241 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 FAM205CA6NFA0 338 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 TRIM75PA6NK02 468 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 PHF20L1A8MW92 1017 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 ADAMTS3O15072 1205 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 CTAGE5O15320 804 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 XRCC6P12956 609 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDH13-205ENST00000562307 ATP2B2Q01814 1243 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 KIF4BQ2VIQ3 1234 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 TBC1D10BQ4KMP7 808 aaPredicted RBP10.92□□□□□ -0.66
CDH13-205ENST00000562307 TTBK2Q6IQ55 1244 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 HEATR3Q7Z4Q2 680 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 CDAN1Q8IWY9 1227 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 FSIP1Q8NA03 581 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 ZNF579Q8NAF0 562 aaKnown RBP10.92□□□□□ -0.66
CDH13-205ENST00000562307 VAT1LQ9HCJ6 419 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 GPRC5DQ9NZD1 345 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 FBXO2Q9UK22 296 aaPredicted RBP10.92□□□□□ -0.66
CDH13-205ENST00000562307 ZBTB21Q9ULJ3 1066 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 PCDHA6Q9UN73 950 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 HPSEQ9Y251 543 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 TMX2Q9Y320 296 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 PCDHA8Q9Y5H6 950 aa10.92□□□□□ -0.66
CDH13-205ENST00000562307 SRPRBQ9Y5M8 271 aaKnown RBP10.92□□□□□ -0.66
CDH13-205ENST00000562307 ZBTB5O15062 677 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 NDUFB10O96000 172 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 MARCKSP29966 332 aaPredicted RBP10.91□□□□□ -0.66
CDH13-205ENST00000562307 GNA11P29992 359 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 SLC1A4P43007 532 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 NAPAP54920 295 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 MAP3K11Q16584 847 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 CCDC96Q2M329 555 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 NOM1Q5C9Z4 860 aaKnown RBP10.91□□□□□ -0.66
CDH13-205ENST00000562307 RESP18Q5W5W9 173 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 SHC4Q6S5L8 630 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 KRI1Q8N9T8 703 aaKnown RBP10.91□□□□□ -0.66
CDH13-205ENST00000562307 RBSNQ9H1K0 784 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 TNMDQ9H2S6 317 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 TSPY26PQ9H489 355 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 ARHGEF10LQ9HCE6 1279 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 C6orf50Q9HD87 102 aa10.91□□□□□ -0.66
CDH13-205ENST00000562307 DICER1Q9UPY3 1922 aaKnown RBP10.9□□□□□ -0.66
CDH13-205ENST00000562307 A0A1B0GVL5 298 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 SMCO2A6NFE2 343 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 USP17L10C9JJH3 530 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 PLA2G6O60733 806 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 PPP1R11O60927 126 aaPredicted RBP10.9□□□□□ -0.66
CDH13-205ENST00000562307 ASNSP08243 561 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 BMP3P12645 472 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 SLC16A2P36021 539 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 NDUFA8P51970 172 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 TTC38Q5R3I4 469 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 PIK3AP1Q6ZUJ8 805 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 KCTD1Q719H9 257 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 MIGA2Q7L4E1 593 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 KRT25Q7Z3Z0 450 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 HOMER1Q86YM7 354 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 APOBEC3FQ8IUX4 373 aaKnown RBP10.9□□□□□ -0.66
CDH13-205ENST00000562307 ACER1Q8TDN7 264 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 TIGD1Q96MW7 591 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 DEFB129Q9H1M3 183 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 ZNF112Q9UJU3 913 aa10.9□□□□□ -0.66
CDH13-205ENST00000562307 ASTN2O75129 1339 aaPredicted RBP10.89□□□□□ -0.67
CDH13-205ENST00000562307 CCDC194A0A1B0GVG4 234 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 WNT7AO00755 349 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 CTNND1O60716 968 aaKnown RBP10.89□□□□□ -0.67
CDH13-205ENST00000562307 KINO60870 393 aaKnown RBP10.89□□□□□ -0.67
CDH13-205ENST00000562307 PFKFB1P16118 471 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 YBX3P16989 372 aaKnown RBP eCLIP10.89□□□□□ -0.67
CDH13-205ENST00000562307 ECE1P42892 770 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 ATP2C1P98194 919 aaPredicted RBP10.89□□□□□ -0.67
CDH13-205ENST00000562307 CAMK4Q16566 473 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 ELOA2Q8IYF1 753 aaPredicted RBP10.89□□□□□ -0.67
CDH13-205ENST00000562307 C4orf32Q8N8J7 132 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 FERMT2Q96AC1 680 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 HOOK2Q96ED9 719 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 CLIC6Q96NY7 704 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 GLT8D2Q9H1C3 349 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 SH2D4AQ9H788 454 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 VCPKMTQ9H867 229 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 GOPCQ9HD26 462 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 RIC8AQ9NPQ8 531 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 PPP2R3BQ9Y5P8 575 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 MYH4Q9Y623 1939 aa10.89□□□□□ -0.67
CDH13-205ENST00000562307 PITPNM2Q9BZ72 1349 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 ZNF202O95125 648 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 CCDC192P0DO97 292 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 ATP2B1P20020 1258 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 EPS15P42566 896 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 CLK2P49760 499 aaKnown RBP10.88□□□□□ -0.67
CDH13-205ENST00000562307 HIRAP54198 1017 aaPredicted RBP10.88□□□□□ -0.67
CDH13-205ENST00000562307 ORC2Q13416 577 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms