RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PRKAG2Q9UGJ0 569 aa30.1■■■□□ 2.41
NME3-202ENST00000561637 ATP11BQ9Y2G3 1177 aa30.1■■■□□ 2.41
NME3-202ENST00000561637 F5H6K3 240 aa30.09■■■□□ 2.41
NME3-202ENST00000561637 MSCO60682 206 aa30.09■■■□□ 2.41
NME3-202ENST00000561637 IRX6P78412 446 aaPredicted RBP30.09■■■□□ 2.41
NME3-202ENST00000561637 KLRC3Q07444 240 aa30.09■■■□□ 2.41
NME3-202ENST00000561637 AAMPQ13685 434 aa30.09■■■□□ 2.41
NME3-202ENST00000561637 SEMA6BQ9H3T3 888 aa30.09■■■□□ 2.41
NME3-202ENST00000561637 MTMR4Q9NYA4 1195 aa30.09■■■□□ 2.41
NME3-202ENST00000561637 ZNF236Q9UL36 1845 aa30.09■■■□□ 2.41
NME3-202ENST00000561637 VWA5AO00534 786 aa30.08■■■□□ 2.41
NME3-202ENST00000561637 CYBAP13498 195 aa30.08■■■□□ 2.41
NME3-202ENST00000561637 NUCB1Q02818 461 aa30.08■■■□□ 2.41
NME3-202ENST00000561637 NMIQ13287 307 aaPredicted RBP30.08■■■□□ 2.41
NME3-202ENST00000561637 ANO1Q5XXA6 986 aa30.08■■■□□ 2.41
NME3-202ENST00000561637 ZNF589Q86UQ0 364 aaPredicted RBP30.08■■■□□ 2.41
NME3-202ENST00000561637 CHD1LQ86WJ1 897 aa30.08■■■□□ 2.41
NME3-202ENST00000561637 PLEKHM2Q8IWE5 1019 aa30.08■■■□□ 2.41
NME3-202ENST00000561637 CHMP4CQ96CF2 233 aa30.08■■■□□ 2.41
NME3-202ENST00000561637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.08■■■□□ 2.41
NME3-202ENST00000561637 PLIN4Q96Q06 1357 aa30.07■■■□□ 2.4
NME3-202ENST00000561637 TFAP4Q01664 338 aa30.07■■■□□ 2.4
NME3-202ENST00000561637 NEDD1Q8NHV4 660 aa30.07■■■□□ 2.4
NME3-202ENST00000561637 TRIM6-TRIM34B2RNG4 842 aa30.06■■■□□ 2.4
NME3-202ENST00000561637 SLC39A5Q6ZMH5 540 aa30.06■■■□□ 2.4
NME3-202ENST00000561637 MAFAQ8NHW3 353 aaPredicted RBP30.06■■■□□ 2.4
NME3-202ENST00000561637 HELLSQ9NRZ9 838 aa30.06■■■□□ 2.4
NME3-202ENST00000561637 ZNF214Q9UL59 606 aaPredicted RBP30.06■■■□□ 2.4
NME3-202ENST00000561637 SMCHD1A6NHR9 2005 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 TSPY3P0CV98 308 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 TSPY8P0CW00 308 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 PDE4BQ07343 736 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 RASGRP2Q7LDG7 609 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 DPP9Q86TI2 863 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 MYLIPQ8WY64 445 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 BADQ92934 168 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 RILPL2Q969X0 211 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 SLF1Q9BQI6 1058 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 TTYH1Q9H313 450 aaPredicted RBP30.05■■■□□ 2.4
NME3-202ENST00000561637 MROH8Q9H579 483 aa30.05■■■□□ 2.4
NME3-202ENST00000561637 ZNFX1Q9P2E3 1918 aaKnown RBP30.04■■■□□ 2.4
NME3-202ENST00000561637 NMT2O60551 498 aa30.04■■■□□ 2.4
NME3-202ENST00000561637 ZNF287Q9HBT7 754 aa30.04■■■□□ 2.4
NME3-202ENST00000561637 PRDM5Q9NQX1 630 aaPredicted RBP30.04■■■□□ 2.4
NME3-202ENST00000561637 TTLL1O95922 423 aa30.03■■■□□ 2.4
NME3-202ENST00000561637 RIOX2Q8IUF8 465 aa30.03■■■□□ 2.4
NME3-202ENST00000561637 MKL1Q969V6 931 aa30.03■■■□□ 2.4
NME3-202ENST00000561637 STRNO43815 780 aa30.02■■■□□ 2.4
NME3-202ENST00000561637 PGK2P07205 417 aa30.02■■■□□ 2.4
NME3-202ENST00000561637 STAT3P40763 770 aa30.02■■■□□ 2.4
NME3-202ENST00000561637 TRIM60Q495X7 471 aa30.02■■■□□ 2.4
NME3-202ENST00000561637 MCMDC2Q4G0Z9 681 aa30.02■■■□□ 2.4
NME3-202ENST00000561637 SH3RF1Q7Z6J0 888 aa30.02■■■□□ 2.4
NME3-202ENST00000561637 ARRDC4Q8NCT1 418 aa30.02■■■□□ 2.4
NME3-202ENST00000561637 RIPK3Q9Y572 518 aa30.02■■■□□ 2.4
NME3-202ENST00000561637 SLC3A2P08195 630 aaKnown RBP30.01■■■□□ 2.39
NME3-202ENST00000561637 PRAMEF19Q5SWL8 479 aa30.01■■■□□ 2.39
NME3-202ENST00000561637 PDLIM7Q9NR12 457 aa30.01■■■□□ 2.39
NME3-202ENST00000561637 IL17RBQ9NRM6 502 aa30.01■■■□□ 2.39
NME3-202ENST00000561637 FGAP02671 866 aa30■■■□□ 2.39
NME3-202ENST00000561637 SNX17Q15036 470 aa30■■■□□ 2.39
NME3-202ENST00000561637 ALX1Q15699 326 aa30■■■□□ 2.39
NME3-202ENST00000561637 SLFN13Q68D06 897 aa30■■■□□ 2.39
NME3-202ENST00000561637 KIFC2Q96AC6 838 aa30■■■□□ 2.39
NME3-202ENST00000561637 MMP19Q99542 508 aa30■■■□□ 2.39
NME3-202ENST00000561637 TRIM43BA6NCK2 446 aa29.99■■■□□ 2.39
NME3-202ENST00000561637 KBTBD13C9JR72 458 aa29.99■■■□□ 2.39
NME3-202ENST00000561637 SLC25A27O95847 323 aa29.99■■■□□ 2.39
NME3-202ENST00000561637 MYCNP04198 464 aaPredicted RBP29.99■■■□□ 2.39
NME3-202ENST00000561637 HSPD1P10809 573 aaKnown RBP29.99■■■□□ 2.39
NME3-202ENST00000561637 FCER1AP12319 257 aa29.99■■■□□ 2.39
NME3-202ENST00000561637 OLFML2BQ68BL8 750 aa29.99■■■□□ 2.39
NME3-202ENST00000561637 ABRAQ8N0Z2 381 aa29.99■■■□□ 2.39
NME3-202ENST00000561637 GMCL1P1Q8NEA9 526 aa29.99■■■□□ 2.39
NME3-202ENST00000561637 TRIM43Q96BQ3 446 aaPredicted RBP29.99■■■□□ 2.39
NME3-202ENST00000561637 MAML3Q96JK9 1138 aa29.99■■■□□ 2.39
NME3-202ENST00000561637 ANAPC4Q9UJX5 808 aa29.99■■■□□ 2.39
NME3-202ENST00000561637 SDSP20132 328 aa29.98■■■□□ 2.39
NME3-202ENST00000561637 ADCYAP1R1P41586 468 aa29.98■■■□□ 2.39
NME3-202ENST00000561637 SLC4A3P48751 1232 aa29.98■■■□□ 2.39
NME3-202ENST00000561637 HAND2P61296 217 aa29.98■■■□□ 2.39
NME3-202ENST00000561637 SMAD3P84022 425 aaKnown RBP29.98■■■□□ 2.39
NME3-202ENST00000561637 SNRNP48Q6IEG0 339 aaKnown RBP29.98■■■□□ 2.39
NME3-202ENST00000561637 FERMT2Q96AC1 680 aa29.98■■■□□ 2.39
NME3-202ENST00000561637 OSBPL3Q9H4L5 887 aa29.98■■■□□ 2.39
NME3-202ENST00000561637 CCDC171Q6TFL3 1326 aa29.97■■■□□ 2.39
NME3-202ENST00000561637 TSPY2A6NKD2 308 aa29.97■■■□□ 2.39
NME3-202ENST00000561637 SEPT4O43236 478 aa29.97■■■□□ 2.39
NME3-202ENST00000561637 RANBP6O60518 1105 aaKnown RBP29.97■■■□□ 2.39
NME3-202ENST00000561637 PDE4AP27815 886 aa29.97■■■□□ 2.39
NME3-202ENST00000561637 CPXCR1Q8N123 301 aa29.97■■■□□ 2.39
NME3-202ENST00000561637 RAVER2Q9HCJ3 691 aaKnown RBP29.97■■■□□ 2.39
NME3-202ENST00000561637 PRPF38AQ8NAV1 312 aaKnown RBP29.96■■■□□ 2.39
NME3-202ENST00000561637 PRDM6Q9NQX0 595 aa29.96■■■□□ 2.39
NME3-202ENST00000561637 ISY1Q9ULR0 285 aaKnown RBP29.96■■■□□ 2.39
NME3-202ENST00000561637 STX8Q9UNK0 236 aa29.96■■■□□ 2.39
NME3-202ENST00000561637 ORC4O43929 436 aa29.95■■■□□ 2.39
NME3-202ENST00000561637 BMP3P12645 472 aa29.95■■■□□ 2.39
NME3-202ENST00000561637 MCCP23508 829 aa29.95■■■□□ 2.39
NME3-202ENST00000561637 ITGB8P26012 769 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms