RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TP53P04637 393 aaPredicted RBP5.52□□□□□ -1.53
HERC1-215ENST00000561436 ETFBP38117 255 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 PPP2R5EQ16537 467 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 NBPF9Q3BBW0 867 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 DCAF15Q66K64 600 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 TTC6Q86TZ1 520 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 NOP9Q86U38 636 aaKnown RBP5.52□□□□□ -1.53
HERC1-215ENST00000561436 C19orf47Q8N9M1 422 aaKnown RBP5.52□□□□□ -1.53
HERC1-215ENST00000561436 FAM168AQ92567 244 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 MRFAP1L1Q96HT8 127 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 COX4I2Q96KJ9 171 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 ALPK1Q96QP1 1244 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 FOXP3Q9BZS1 431 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 PRDM14Q9GZV8 571 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 C19orf44Q9H6X5 657 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 KCNK12Q9HB15 430 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 GFOD1Q9NXC2 390 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 EBF1Q9UH73 591 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 PCDHB10Q9UN67 800 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 WIZO95785 1651 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 TDRD9Q8NDG6 1382 aaKnown RBP5.52□□□□□ -1.53
HERC1-215ENST00000561436 GRIN2BQ13224 1484 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 DNMBPQ6XZF7 1577 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 TNFRSF10CO14798 259 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 GUCY2CP25092 1073 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 RAB33AQ14088 237 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 FXNQ16595 210 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 CCDC144BQ3MJ40 725 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 TAB3Q8N5C8 712 aaPredicted RBP5.51□□□□□ -1.53
HERC1-215ENST00000561436 HNRNPLLQ8WVV9 542 aaKnown RBP5.51□□□□□ -1.53
HERC1-215ENST00000561436 LIN37Q96GY3 246 aaPredicted RBP5.51□□□□□ -1.53
HERC1-215ENST00000561436 HDAC8Q9BY41 377 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.51□□□□□ -1.53
HERC1-215ENST00000561436 TRIT1Q9H3H1 467 aaKnown RBP5.51□□□□□ -1.53
HERC1-215ENST00000561436 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.51□□□□□ -1.53
HERC1-215ENST00000561436 LMCD1Q9NZU5 365 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 FBXL21Q9UKT6 434 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 SYNJ2O15056 1496 aa5.51□□□□□ -1.53
HERC1-215ENST00000561436 POLA1P09884 1462 aaPredicted RBP5.51□□□□□ -1.53
HERC1-215ENST00000561436 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
HERC1-215ENST00000561436 RNF4P78317 190 aa5.5□□□□□ -1.53
HERC1-215ENST00000561436 TIGD5Q53EQ6 642 aa5.5□□□□□ -1.53
HERC1-215ENST00000561436 UNC5AQ6ZN44 842 aa5.5□□□□□ -1.53
HERC1-215ENST00000561436 TMPRSS7Q7RTY8 843 aa5.5□□□□□ -1.53
HERC1-215ENST00000561436 ATG4DQ86TL0 474 aaPredicted RBP5.5□□□□□ -1.53
HERC1-215ENST00000561436 FAM169BQ8N8A8 192 aa5.5□□□□□ -1.53
HERC1-215ENST00000561436 MKL1Q969V6 931 aa5.5□□□□□ -1.53
HERC1-215ENST00000561436 KRTAP9-2Q9BYQ4 174 aa5.5□□□□□ -1.53
HERC1-215ENST00000561436 TMA7Q9Y2S6 64 aaKnown RBP5.5□□□□□ -1.53
HERC1-215ENST00000561436 LTBP3Q9NS15 1303 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 ZNF503-AS2A6NEH8 195 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 SHOXO15266 292 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 PAX4O43316 350 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 EFEMP2O95967 443 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 CANXP27824 592 aaKnown RBP5.49□□□□□ -1.53
HERC1-215ENST00000561436 CCNFP41002 786 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 CASP7P55210 303 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 TEKQ02763 1124 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 BMS1Q14692 1282 aaKnown RBP5.49□□□□□ -1.53
HERC1-215ENST00000561436 AXDND1Q5T1B0 1012 aaPredicted RBP5.49□□□□□ -1.53
HERC1-215ENST00000561436 LARP1BQ659C4 914 aaKnown RBP5.49□□□□□ -1.53
HERC1-215ENST00000561436 INTS3Q68E01 1043 aaKnown RBP5.49□□□□□ -1.53
HERC1-215ENST00000561436 OGFOD2Q6N063 350 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 CRTC3Q6UUV7 619 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 LRP10Q7Z4F1 713 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 CCDC144CPQ8IYA2 1237 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 USHBP1Q8N6Y0 703 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 FLAD1Q8NFF5 587 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 BRF1Q92994 677 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 TCTN2Q96GX1 697 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 DHRS1Q96LJ7 313 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 SRPK1Q96SB4 655 aaKnown RBP5.49□□□□□ -1.53
HERC1-215ENST00000561436 PHAXQ9H814 394 aaKnown RBP5.49□□□□□ -1.53
HERC1-215ENST00000561436 TMEM59LQ9UK28 342 aa5.49□□□□□ -1.53
HERC1-215ENST00000561436 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.48□□□□□ -1.53
HERC1-215ENST00000561436 KLF4O43474 513 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 SYPP08247 313 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 ZGLP1P0C6A0 271 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 JUNBP17275 347 aaPredicted RBP5.48□□□□□ -1.53
HERC1-215ENST00000561436 RPL10P27635 214 aaKnown RBP5.48□□□□□ -1.53
HERC1-215ENST00000561436 CTSKP43235 329 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 IFRD2Q12894 506 aaPredicted RBP5.48□□□□□ -1.53
HERC1-215ENST00000561436 NCAPHQ15003 741 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 KCNMB1Q16558 191 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 BBS9Q3SYG4 887 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 ZNF648Q5T619 568 aaPredicted RBP5.48□□□□□ -1.53
HERC1-215ENST00000561436 ZSWIM9Q86XI8 627 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 ASIC4Q96FT7 647 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 KIRREL1Q96J84 757 aa5.48□□□□□ -1.53
HERC1-215ENST00000561436 ASCC2Q9H1I8 757 aaPredicted RBP5.48□□□□□ -1.53
HERC1-215ENST00000561436 SUCOQ9UBS9 1254 aaKnown RBP5.48□□□□□ -1.53
HERC1-215ENST00000561436 SYNJ1O43426 1573 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 GAPVD1Q14C86 1478 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 SNAPC4Q5SXM2 1469 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 BIN1O00499 593 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 USP2O75604 605 aaPredicted RBP5.47□□□□□ -1.53
HERC1-215ENST00000561436 DDAH1O94760 285 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 NAT2P11245 290 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 GDNFP39905 211 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms