RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 PRKG1Q13976 671 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 SYCP3Q8IZU3 236 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 SH2D4AQ9H788 454 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 IMPACTQ9P2X3 320 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 U2AF2P26368 475 aaKnown RBP eCLIP18.36■□□□□ 0.53
AP4E1-205ENST00000561393 TBC1D8BQ0IIM8 1120 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 SBK1Q52WX2 424 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 CT47A1Q5JQC4 288 aaPredicted RBP18.36■□□□□ 0.53
AP4E1-205ENST00000561393 TMED8Q6PL24 325 aaPredicted RBP18.36■□□□□ 0.53
AP4E1-205ENST00000561393 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
AP4E1-205ENST00000561393 TRAF5O00463 557 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 PLS1Q14651 629 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 SYCP1Q15431 976 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 LRRC8AQ8IWT6 810 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 KANSL2Q9H9L4 492 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 HOMER2Q9NSB8 354 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 POLLQ9UGP5 575 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 PCDHA12Q9UN75 941 aa18.36■□□□□ 0.53
AP4E1-205ENST00000561393 ECE2O60344 883 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 CCDC175P0C221 793 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 TRIML1Q8N9V2 468 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.35■□□□□ 0.53
AP4E1-205ENST00000561393 GLT8D2Q9H1C3 349 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 LRRC4BQ9NT99 713 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 LUC7L2Q9Y383 392 aaKnown RBP18.35■□□□□ 0.53
AP4E1-205ENST00000561393 CCDC181Q5TID7 509 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 GTPBP6O43824 516 aaPredicted RBP18.35■□□□□ 0.53
AP4E1-205ENST00000561393 AKR1B1P15121 316 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 TROAPQ12815 778 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 UBE2SQ16763 222 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 GPIHBP1Q8IV16 184 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 TTLL6Q8N841 843 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 SRRTQ9BXP5 876 aaKnown RBP18.35■□□□□ 0.53
AP4E1-205ENST00000561393 FLT1P17948 1338 aa18.35■□□□□ 0.53
AP4E1-205ENST00000561393 PRR16Q569H4 304 aa18.34■□□□□ 0.53
AP4E1-205ENST00000561393 HERC4Q5GLZ8 1057 aaPredicted RBP18.34■□□□□ 0.53
AP4E1-205ENST00000561393 CNNM4Q6P4Q7 775 aa18.34■□□□□ 0.53
AP4E1-205ENST00000561393 NEDD1Q8NHV4 660 aa18.34■□□□□ 0.53
AP4E1-205ENST00000561393 ARID5BQ14865 1188 aa18.34■□□□□ 0.53
AP4E1-205ENST00000561393 SPECC1LQ69YQ0 1117 aa18.34■□□□□ 0.53
AP4E1-205ENST00000561393 FBXO11Q86XK2 927 aa18.34■□□□□ 0.53
AP4E1-205ENST00000561393 SP4Q02446 784 aa18.34■□□□□ 0.53
AP4E1-205ENST00000561393 GOLGA8FQ08AF8 430 aa18.34■□□□□ 0.53
AP4E1-205ENST00000561393 GOLGA8DPQ0D2H9 430 aa18.34■□□□□ 0.53
AP4E1-205ENST00000561393 COL23A1Q86Y22 540 aaPredicted RBP18.34■□□□□ 0.53
AP4E1-205ENST00000561393 TSC1Q92574 1164 aa18.34■□□□□ 0.53
AP4E1-205ENST00000561393 NOC4LQ9BVI4 516 aaKnown RBP18.34■□□□□ 0.53
AP4E1-205ENST00000561393 DHX36Q9H2U1 1008 aaKnown RBP18.34■□□□□ 0.53
AP4E1-205ENST00000561393 VIRMAQ69YN4 1812 aaKnown RBP18.34■□□□□ 0.53
AP4E1-205ENST00000561393 RPN1P04843 607 aaKnown RBP18.33■□□□□ 0.53
AP4E1-205ENST00000561393 EVCP57679 992 aa18.33■□□□□ 0.53
AP4E1-205ENST00000561393 USP49Q70CQ1 688 aa18.33■□□□□ 0.53
AP4E1-205ENST00000561393 MIGA2Q7L4E1 593 aa18.33■□□□□ 0.53
AP4E1-205ENST00000561393 GSDMAQ96QA5 445 aa18.33■□□□□ 0.53
AP4E1-205ENST00000561393 ANAPC4Q9UJX5 808 aa18.33■□□□□ 0.53
AP4E1-205ENST00000561393 SNAP25P60880 206 aa18.33■□□□□ 0.53
AP4E1-205ENST00000561393 ARID5AQ03989 594 aa18.33■□□□□ 0.53
AP4E1-205ENST00000561393 GRM4Q14833 912 aa18.33■□□□□ 0.53
AP4E1-205ENST00000561393 CNGA4Q8IV77 575 aa18.33■□□□□ 0.53
AP4E1-205ENST00000561393 CCDC65Q8IXS2 484 aa18.33■□□□□ 0.53
AP4E1-205ENST00000561393 CCDC93Q567U6 631 aa18.33■□□□□ 0.52
AP4E1-205ENST00000561393 NAP1L4Q99733 375 aaKnown RBP18.33■□□□□ 0.52
AP4E1-205ENST00000561393 SAMSN1Q9NSI8 373 aaKnown RBP18.33■□□□□ 0.52
AP4E1-205ENST00000561393 RIOK3O14730 519 aaKnown RBP18.33■□□□□ 0.52
AP4E1-205ENST00000561393 PDCL3Q9H2J4 239 aa18.33■□□□□ 0.52
AP4E1-205ENST00000561393 DDX25Q9UHL0 483 aaKnown RBP18.33■□□□□ 0.52
AP4E1-205ENST00000561393 KRT9P35527 623 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 NELFCDQ8IXH7 590 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 NBPF3Q9H094 633 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 DDX39AO00148 427 aaKnown RBP18.32■□□□□ 0.52
AP4E1-205ENST00000561393 IKBKBO14920 756 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 RASA1P20936 1047 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 NTRK3Q16288 839 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 PAGE5Q96GU1 130 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 USO1O60763 962 aaKnown RBP18.32■□□□□ 0.52
AP4E1-205ENST00000561393 FAM13AO94988 1023 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 GH2P01242 217 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 MATR3P43243 847 aaKnown RBP eCLIP18.32■□□□□ 0.52
AP4E1-205ENST00000561393 SEPT2Q15019 361 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 SPATA1Q5VX52 437 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 HAUS3Q68CZ6 603 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 SPAG5Q96R06 1193 aa18.32■□□□□ 0.52
AP4E1-205ENST00000561393 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
AP4E1-205ENST00000561393 AMNQ9BXJ7 453 aa18.31■□□□□ 0.52
AP4E1-205ENST00000561393 RRP9O43818 475 aaKnown RBP18.31■□□□□ 0.52
AP4E1-205ENST00000561393 PRR29P0C7W0 189 aa18.31■□□□□ 0.52
AP4E1-205ENST00000561393 GRIN1Q05586 938 aa18.31■□□□□ 0.52
AP4E1-205ENST00000561393 NSMFQ6X4W1 530 aa18.31■□□□□ 0.52
AP4E1-205ENST00000561393 SLC39A2Q9NP94 309 aa18.31■□□□□ 0.52
AP4E1-205ENST00000561393 AXDND1Q5T1B0 1012 aaPredicted RBP18.31■□□□□ 0.52
AP4E1-205ENST00000561393 KIAA1524Q8TCG1 905 aa18.31■□□□□ 0.52
AP4E1-205ENST00000561393 GOPCQ9HD26 462 aa18.31■□□□□ 0.52
AP4E1-205ENST00000561393 MORC3Q14149 939 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 HSP90B2PQ58FF3 399 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 ZFYVE27Q5T4F4 411 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 ZNF771Q7L3S4 317 aaPredicted RBP18.3■□□□□ 0.52
AP4E1-205ENST00000561393 KCPQ6ZWJ8 1503 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 CYLC1P35663 651 aaPredicted RBP18.3■□□□□ 0.52
AP4E1-205ENST00000561393 TXLNBQ8N3L3 684 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 CHURC1Q8WUH1 139 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms