RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-215	ENST00000561187	TSPY3	P0CV98	308 aa		32.22	■■■□□ 2.75
SNRPA1-215	ENST00000561187	TSPY8	P0CW00	308 aa		32.22	■■■□□ 2.75
SNRPA1-215	ENST00000561187	TRIM60	Q495X7	471 aa		32.22	■■■□□ 2.75
SNRPA1-215	ENST00000561187	ZMYM1	Q5SVZ6	1142 aa		32.22	■■■□□ 2.75
SNRPA1-215	ENST00000561187	RAVER2	Q9HCJ3	691 aa	Known RBP	32.22	■■■□□ 2.75
SNRPA1-215	ENST00000561187	MTMR4	Q9NYA4	1195 aa		32.22	■■■□□ 2.75
SNRPA1-215	ENST00000561187	PRKAG2	Q9UGJ0	569 aa		32.22	■■■□□ 2.75
SNRPA1-215	ENST00000561187	PGK1	P00558	417 aa		32.21	■■■□□ 2.75
SNRPA1-215	ENST00000561187	COPB2	P35606	906 aa		32.21	■■■□□ 2.75
SNRPA1-215	ENST00000561187	PPARA	Q07869	468 aa		32.21	■■■□□ 2.75
SNRPA1-215	ENST00000561187	SLC39A5	Q6ZMH5	540 aa		32.21	■■■□□ 2.75
SNRPA1-215	ENST00000561187	XPNPEP3	Q9NQH7	507 aa		32.21	■■■□□ 2.75
SNRPA1-215	ENST00000561187	TTLL1	O95922	423 aa		32.2	■■■□□ 2.75
SNRPA1-215	ENST00000561187	RARB	P10826	455 aa		32.2	■■■□□ 2.75
SNRPA1-215	ENST00000561187	LRIT3	Q3SXY7	679 aa		32.2	■■■□□ 2.75
SNRPA1-215	ENST00000561187	ANKRD45	Q5TZF3	282 aa		32.2	■■■□□ 2.75
SNRPA1-215	ENST00000561187	PRPF38A	Q8NAV1	312 aa	Known RBP	32.2	■■■□□ 2.75
SNRPA1-215	ENST00000561187	ZBTB47	Q9UFB7	747 aa	Predicted RBP	32.2	■■■□□ 2.75
SNRPA1-215	ENST00000561187	PDE4B	Q07343	736 aa		32.19	■■■□□ 2.74
SNRPA1-215	ENST00000561187	DEFB123	Q8N688	67 aa		32.19	■■■□□ 2.74
SNRPA1-215	ENST00000561187	DDX11	Q96FC9	970 aa		32.19	■■■□□ 2.74
SNRPA1-215	ENST00000561187	LTBP2	Q14767	1821 aa		32.19	■■■□□ 2.74
SNRPA1-215	ENST00000561187	ZBED4	O75132	1171 aa		32.18	■■■□□ 2.74
SNRPA1-215	ENST00000561187	TFAP4	Q01664	338 aa		32.18	■■■□□ 2.74
SNRPA1-215	ENST00000561187	CTDSPL2	Q05D32	466 aa		32.18	■■■□□ 2.74
SNRPA1-215	ENST00000561187	SLFN13	Q68D06	897 aa		32.18	■■■□□ 2.74
SNRPA1-215	ENST00000561187	INCENP	Q9NQS7	918 aa		32.18	■■■□□ 2.74
SNRPA1-215	ENST00000561187	HOMER2	Q9NSB8	354 aa		32.18	■■■□□ 2.74
SNRPA1-215	ENST00000561187	LAMA2	P24043	3122 aa	Known RBP	32.18	■■■□□ 2.74
SNRPA1-215	ENST00000561187	PLIN4	Q96Q06	1357 aa		32.18	■■■□□ 2.74
SNRPA1-215	ENST00000561187	ZHX1	Q9UKY1	873 aa	Predicted RBP	32.17	■■■□□ 2.74
SNRPA1-215	ENST00000561187	CNPY2	Q9Y2B0	182 aa		32.17	■■■□□ 2.74
SNRPA1-215	ENST00000561187	SALL3	Q9BXA9	1300 aa		32.17	■■■□□ 2.74
SNRPA1-215	ENST00000561187	SLC3A2	P08195	630 aa	Known RBP	32.16	■■■□□ 2.74
SNRPA1-215	ENST00000561187	ZNF865	P0CJ78	1059 aa	Predicted RBP	32.16	■■■□□ 2.74
SNRPA1-215	ENST00000561187	NEDD1	Q8NHV4	660 aa		32.16	■■■□□ 2.74
SNRPA1-215	ENST00000561187	FEM1B	Q9UK73	627 aa		32.16	■■■□□ 2.74
SNRPA1-215	ENST00000561187	MTMR7	Q9Y216	660 aa		32.16	■■■□□ 2.74
SNRPA1-215	ENST00000561187	DIS3	Q9Y2L1	958 aa	Known RBP	32.16	■■■□□ 2.74
SNRPA1-215	ENST00000561187	FOXP2	O15409	715 aa		32.15	■■■□□ 2.74
SNRPA1-215	ENST00000561187	IK	Q13123	557 aa	Predicted RBP	32.15	■■■□□ 2.74
SNRPA1-215	ENST00000561187	VPS53	Q5VIR6	699 aa		32.15	■■■□□ 2.74
SNRPA1-215	ENST00000561187	RASGRP2	Q7LDG7	609 aa		32.15	■■■□□ 2.74
SNRPA1-215	ENST00000561187	GMCL1P1	Q8NEA9	526 aa		32.15	■■■□□ 2.74
SNRPA1-215	ENST00000561187	MKL1	Q969V6	931 aa		32.15	■■■□□ 2.74
SNRPA1-215	ENST00000561187	SLC38A10	Q9HBR0	1119 aa		32.15	■■■□□ 2.74
SNRPA1-215	ENST00000561187	NRBP1	Q9UHY1	535 aa		32.15	■■■□□ 2.74
SNRPA1-215	ENST00000561187	BMP3	P12645	472 aa		32.14	■■■□□ 2.74
SNRPA1-215	ENST00000561187	AKR1A1	P14550	325 aa		32.14	■■■□□ 2.74
SNRPA1-215	ENST00000561187	SH3RF1	Q7Z6J0	888 aa		32.14	■■■□□ 2.74
SNRPA1-215	ENST00000561187	YTHDC1	Q96MU7	727 aa	Known RBP	32.14	■■■□□ 2.74
SNRPA1-215	ENST00000561187	TMEM232	C9JQI7	657 aa		32.13	■■■□□ 2.73
SNRPA1-215	ENST00000561187	NMT2	O60551	498 aa		32.13	■■■□□ 2.73
SNRPA1-215	ENST00000561187	RNF180	Q86T96	592 aa		32.13	■■■□□ 2.73
SNRPA1-215	ENST00000561187	ANKRD35	Q8N283	1001 aa		32.13	■■■□□ 2.73
SNRPA1-215	ENST00000561187	PDLIM7	Q9NR12	457 aa		32.13	■■■□□ 2.73
SNRPA1-215	ENST00000561187	STX8	Q9UNK0	236 aa		32.13	■■■□□ 2.73
SNRPA1-215	ENST00000561187	MCM3AP	O60318	1980 aa		32.12	■■■□□ 2.73
SNRPA1-215	ENST00000561187	PHF24	Q9UPV7	400 aa		32.12	■■■□□ 2.73
SNRPA1-215	ENST00000561187	TSPY2	A6NKD2	308 aa		32.11	■■■□□ 2.73
SNRPA1-215	ENST00000561187	SNAI1	O95863	264 aa	Predicted RBP	32.11	■■■□□ 2.73
SNRPA1-215	ENST00000561187	SNX17	Q15036	470 aa		32.11	■■■□□ 2.73
SNRPA1-215	ENST00000561187	BAD	Q92934	168 aa		32.11	■■■□□ 2.73
SNRPA1-215	ENST00000561187	TACC3	Q9Y6A5	838 aa		32.11	■■■□□ 2.73
SNRPA1-215	ENST00000561187	DNAJC25-GNG10	A0A024R161	153 aa		32.1	■■■□□ 2.73
SNRPA1-215	ENST00000561187	ATP2A1	O14983	1001 aa		32.1	■■■□□ 2.73
SNRPA1-215	ENST00000561187	MCC	P23508	829 aa		32.1	■■■□□ 2.73
SNRPA1-215	ENST00000561187	SNAP25	P60880	206 aa		32.1	■■■□□ 2.73
SNRPA1-215	ENST00000561187	TLE2	Q04725	743 aa		32.1	■■■□□ 2.73
SNRPA1-215	ENST00000561187	KCTD1	Q719H9	257 aa		32.1	■■■□□ 2.73
SNRPA1-215	ENST00000561187	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	32.1	■■■□□ 2.73
SNRPA1-215	ENST00000561187	SYNRG	Q9UMZ2	1314 aa		32.09	■■■□□ 2.73
SNRPA1-215	ENST00000561187		A0A1W2PQ45	241 aa	Predicted RBP	32.09	■■■□□ 2.73
SNRPA1-215	ENST00000561187		A0A1W2PQY0	241 aa		32.09	■■■□□ 2.73
SNRPA1-215	ENST00000561187	SLC1A4	P43007	532 aa		32.09	■■■□□ 2.73
SNRPA1-215	ENST00000561187	STAT2	P52630	851 aa		32.09	■■■□□ 2.73
SNRPA1-215	ENST00000561187	FGD4	Q96M96	766 aa		32.09	■■■□□ 2.73
SNRPA1-215	ENST00000561187	SYNGAP1	Q96PV0	1343 aa		32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	TRIM43B	A6NCK2	446 aa		32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	RANBP6	O60518	1105 aa	Known RBP	32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	PQBP1	O60828	265 aa	Known RBP	32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	ADAMTS4	O75173	837 aa		32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	PDE1A	P54750	535 aa		32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	IRX5	P78411	483 aa	Predicted RBP	32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	GPR153	Q6NV75	609 aa		32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	TRIM43	Q96BQ3	446 aa	Predicted RBP	32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	EVI5L	Q96CN4	794 aa		32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	FAM227B	Q96M60	508 aa		32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	TOMM22	Q9NS69	142 aa		32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	SYNPO2	Q9UMS6	1093 aa		32.08	■■■□□ 2.73
SNRPA1-215	ENST00000561187	MYADML2	A6NDP7	307 aa		32.07	■■■□□ 2.72
SNRPA1-215	ENST00000561187	C9orf50	Q5SZB4	431 aa		32.07	■■■□□ 2.72
SNRPA1-215	ENST00000561187	CCDC174	Q6PII3	467 aa		32.07	■■■□□ 2.72
SNRPA1-215	ENST00000561187	SLC17A8	Q8NDX2	589 aa		32.07	■■■□□ 2.72
SNRPA1-215	ENST00000561187	AGBL1	Q96MI9	1066 aa		32.07	■■■□□ 2.72
SNRPA1-215	ENST00000561187	FAM161B	Q96MY7	647 aa		32.07	■■■□□ 2.72
SNRPA1-215	ENST00000561187	IL17RB	Q9NRM6	502 aa		32.07	■■■□□ 2.72
SNRPA1-215	ENST00000561187	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	32.07	■■■□□ 2.72
SNRPA1-215	ENST00000561187	FAM184B	Q9ULE4	1060 aa		32.07	■■■□□ 2.72
SNRPA1-215	ENST00000561187		A0A0D9SFI3	127 aa		32.06	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms