RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
TRIP4-211ENST00000560920 KCNA10Q16322 511 aa22.4■■□□□ 1.18
TRIP4-211ENST00000560920 MSL3Q8N5Y2 521 aaKnown RBP22.4■■□□□ 1.18
TRIP4-211ENST00000560920 NUP88Q99567 741 aaPredicted RBP22.4■■□□□ 1.18
TRIP4-211ENST00000560920 STARD7Q9NQZ5 370 aa22.4■■□□□ 1.18
TRIP4-211ENST00000560920 FAM184BQ9ULE4 1060 aa22.4■■□□□ 1.18
TRIP4-211ENST00000560920 RIPK3Q9Y572 518 aa22.4■■□□□ 1.18
TRIP4-211ENST00000560920 DNAJC25-GNG10A0A024R161 153 aa22.39■■□□□ 1.17
TRIP4-211ENST00000560920 DCDC2CA8MYV0 355 aa22.39■■□□□ 1.17
TRIP4-211ENST00000560920 DNAJB2P25686 324 aa22.39■■□□□ 1.17
TRIP4-211ENST00000560920 IRX5P78411 483 aaPredicted RBP22.39■■□□□ 1.17
TRIP4-211ENST00000560920 MAMDC4Q6UXC1 1216 aa22.39■■□□□ 1.17
TRIP4-211ENST00000560920 NUP133Q8WUM0 1156 aa22.39■■□□□ 1.17
TRIP4-211ENST00000560920 DDRGK1Q96HY6 314 aa22.39■■□□□ 1.17
TRIP4-211ENST00000560920 SLF1Q9BQI6 1058 aa22.39■■□□□ 1.17
TRIP4-211ENST00000560920 PUS7LQ9H0K6 701 aaKnown RBP22.39■■□□□ 1.17
TRIP4-211ENST00000560920 PRDM6Q9NQX0 595 aa22.39■■□□□ 1.17
TRIP4-211ENST00000560920 SYNGAP1Q96PV0 1343 aa22.38■■□□□ 1.17
TRIP4-211ENST00000560920 MYADML2A6NDP7 307 aa22.38■■□□□ 1.17
TRIP4-211ENST00000560920 MOXD2PA6NHM9 499 aa22.38■■□□□ 1.17
TRIP4-211ENST00000560920 TIMP1P01033 207 aa22.38■■□□□ 1.17
TRIP4-211ENST00000560920 USP38Q8NB14 1042 aa22.38■■□□□ 1.17
TRIP4-211ENST00000560920 TEX13BQ9BXU2 312 aa22.38■■□□□ 1.17
TRIP4-211ENST00000560920 TBX21Q9UL17 535 aa22.38■■□□□ 1.17
TRIP4-211ENST00000560920 TTC28Q96AY4 2481 aa22.38■■□□□ 1.17
TRIP4-211ENST00000560920 HMMRO75330 724 aa22.37■■□□□ 1.17
TRIP4-211ENST00000560920 CDK7P50613 346 aa22.37■■□□□ 1.17
TRIP4-211ENST00000560920 SNRNP48Q6IEG0 339 aaKnown RBP22.37■■□□□ 1.17
TRIP4-211ENST00000560920 C16orf59Q7L2K0 433 aa22.37■■□□□ 1.17
TRIP4-211ENST00000560920 DDX11Q96FC9 970 aa22.37■■□□□ 1.17
TRIP4-211ENST00000560920 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.37■■□□□ 1.17
TRIP4-211ENST00000560920 ZBTB40Q9NUA8 1239 aa22.37■■□□□ 1.17
TRIP4-211ENST00000560920 GREB1LQ9C091 1923 aaPredicted RBP22.36■■□□□ 1.17
TRIP4-211ENST00000560920 F5H6K3 240 aa22.36■■□□□ 1.17
TRIP4-211ENST00000560920 ADCY6O43306 1168 aa22.36■■□□□ 1.17
TRIP4-211ENST00000560920 DUSP11O75319 330 aaKnown RBP22.36■■□□□ 1.17
TRIP4-211ENST00000560920 RASA1P20936 1047 aa22.36■■□□□ 1.17
TRIP4-211ENST00000560920 KLRC3Q07444 240 aa22.36■■□□□ 1.17
TRIP4-211ENST00000560920 SYMPKQ92797 1274 aaKnown RBP22.36■■□□□ 1.17
TRIP4-211ENST00000560920 ZNF576Q9H609 170 aa22.36■■□□□ 1.17
TRIP4-211ENST00000560920 ZHX1Q9UKY1 873 aaPredicted RBP22.36■■□□□ 1.17
TRIP4-211ENST00000560920 ELP1O95163 1332 aa22.35■■□□□ 1.17
TRIP4-211ENST00000560920 ATP2A1O14983 1001 aa22.35■■□□□ 1.17
TRIP4-211ENST00000560920 NDUFB10O96000 172 aa22.35■■□□□ 1.17
TRIP4-211ENST00000560920 CST5P28325 142 aaPredicted RBP22.35■■□□□ 1.17
TRIP4-211ENST00000560920 ACVR2BQ13705 512 aa22.35■■□□□ 1.17
TRIP4-211ENST00000560920 MFSD5Q6N075 450 aa22.35■■□□□ 1.17
TRIP4-211ENST00000560920 ZNF467Q7Z7K2 595 aaPredicted RBP22.35■■□□□ 1.17
TRIP4-211ENST00000560920 PRPF38AQ8NAV1 312 aaKnown RBP22.35■■□□□ 1.17
TRIP4-211ENST00000560920 STRBPQ96SI9 672 aaKnown RBP22.35■■□□□ 1.17
TRIP4-211ENST00000560920 NYAP2Q9P242 653 aa22.35■■□□□ 1.17
TRIP4-211ENST00000560920 ARPP21Q9UBL0 812 aaPredicted RBP22.35■■□□□ 1.17
TRIP4-211ENST00000560920 MYH7P12883 1935 aa22.34■■□□□ 1.17
TRIP4-211ENST00000560920 SBK1Q52WX2 424 aa22.34■■□□□ 1.17
TRIP4-211ENST00000560920 TMEM240Q5SV17 173 aa22.34■■□□□ 1.17
TRIP4-211ENST00000560920 CPXCR1Q8N123 301 aa22.34■■□□□ 1.17
TRIP4-211ENST00000560920 STK11IPQ8N1F8 1099 aa22.34■■□□□ 1.17
TRIP4-211ENST00000560920 TIFAQ96CG3 184 aa22.34■■□□□ 1.17
TRIP4-211ENST00000560920 FGD4Q96M96 766 aa22.34■■□□□ 1.17
TRIP4-211ENST00000560920 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.34■■□□□ 1.17
TRIP4-211ENST00000560920 GRXCR1A8MXD5 290 aa22.33■■□□□ 1.17
TRIP4-211ENST00000560920 ASGR1P07306 291 aa22.33■■□□□ 1.17
TRIP4-211ENST00000560920 SLC4A3P48751 1232 aa22.33■■□□□ 1.17
TRIP4-211ENST00000560920 RASIP1Q5U651 963 aa22.33■■□□□ 1.17
TRIP4-211ENST00000560920 ZSCAN25Q6NSZ9 544 aa22.33■■□□□ 1.17
TRIP4-211ENST00000560920 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.33■■□□□ 1.17
TRIP4-211ENST00000560920 GLT1D1Q96MS3 346 aa22.33■■□□□ 1.17
TRIP4-211ENST00000560920 COG6Q9Y2V7 657 aa22.33■■□□□ 1.17
TRIP4-211ENST00000560920 GSG1L2A8MUP6 293 aa22.32■■□□□ 1.16
TRIP4-211ENST00000560920 C6orf222P0C671 652 aaPredicted RBP22.32■■□□□ 1.16
TRIP4-211ENST00000560920 MS4A1P11836 297 aa22.32■■□□□ 1.16
TRIP4-211ENST00000560920 PBX2P40425 430 aa22.32■■□□□ 1.16
TRIP4-211ENST00000560920 GJA9P57773 515 aa22.32■■□□□ 1.16
TRIP4-211ENST00000560920 CCDC144BQ3MJ40 725 aa22.32■■□□□ 1.16
TRIP4-211ENST00000560920 PCSK9Q8NBP7 692 aaKnown RBP22.32■■□□□ 1.16
TRIP4-211ENST00000560920 UPF3AQ9H1J1 476 aaKnown RBP22.32■■□□□ 1.16
TRIP4-211ENST00000560920 MKNK2Q9HBH9 465 aa22.32■■□□□ 1.16
TRIP4-211ENST00000560920 RAVER2Q9HCJ3 691 aaKnown RBP22.32■■□□□ 1.16
TRIP4-211ENST00000560920 CLIP2Q9UDT6 1046 aa22.32■■□□□ 1.16
TRIP4-211ENST00000560920 DDX19BQ9UMR2 479 aa22.32■■□□□ 1.16
TRIP4-211ENST00000560920 MROH7Q68CQ1 1323 aa22.31■■□□□ 1.16
TRIP4-211ENST00000560920 MUC3AQ02505 3323 aa22.31■■□□□ 1.16
TRIP4-211ENST00000560920 IGKV6D-41A0A0C4DH26 115 aa22.31■■□□□ 1.16
TRIP4-211ENST00000560920 ARVCFO00192 962 aa22.31■■□□□ 1.16
TRIP4-211ENST00000560920 ZBED4O75132 1171 aa22.31■■□□□ 1.16
TRIP4-211ENST00000560920 CSF2RAP15509 400 aa22.31■■□□□ 1.16
TRIP4-211ENST00000560920 PPIGQ13427 754 aaKnown RBP eCLIP22.31■■□□□ 1.162e-6■■□□□ 14.2
TRIP4-211ENST00000560920 TJAP1Q5JTD0 557 aa22.31■■□□□ 1.16
TRIP4-211ENST00000560920 PBX4Q9BYU1 374 aa22.31■■□□□ 1.16
TRIP4-211ENST00000560920 ABHD16BQ9H3Z7 469 aa22.31■■□□□ 1.16
TRIP4-211ENST00000560920 SLC38A10Q9HBR0 1119 aa22.31■■□□□ 1.16
TRIP4-211ENST00000560920 MCM3APO60318 1980 aa22.3■■□□□ 1.16
TRIP4-211ENST00000560920 MINDY4BA8MYZ0 360 aa22.3■■□□□ 1.16
TRIP4-211ENST00000560920 CTAGE5O15320 804 aa22.3■■□□□ 1.16
TRIP4-211ENST00000560920 GNASQ5JWF2 1037 aa22.3■■□□□ 1.16
TRIP4-211ENST00000560920 ANKRD35Q8N283 1001 aa22.3■■□□□ 1.16
TRIP4-211ENST00000560920 MKL1Q969V6 931 aa22.3■■□□□ 1.16
TRIP4-211ENST00000560920 KIFC2Q96AC6 838 aa22.3■■□□□ 1.16
TRIP4-211ENST00000560920 VTI1AQ96AJ9 217 aa22.3■■□□□ 1.16
TRIP4-211ENST00000560920 KATNBL1Q9H079 304 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms