RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 BTNL9Q6UXG8 535 aa17.96■□□□□ 0.47
SNRPA1-213ENST00000560856 FAM160B2Q86V87 743 aa17.96■□□□□ 0.47
SNRPA1-213ENST00000560856 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
SNRPA1-213ENST00000560856 CHURC1Q8WUH1 139 aa17.96■□□□□ 0.47
SNRPA1-213ENST00000560856 KIFC2Q96AC6 838 aa17.96■□□□□ 0.47
SNRPA1-213ENST00000560856 TNKSO95271 1327 aa17.96■□□□□ 0.46
SNRPA1-213ENST00000560856 POTEFA5A3E0 1075 aa17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 SLC25A27O95847 323 aa17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 IGHA2P01877 340 aa17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 HOXC6P09630 235 aa17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 STAT2P52630 851 aa17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 MAP2K5Q13163 448 aa17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 CREB3L3Q68CJ9 461 aa17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 MB21D2Q8IYB1 491 aaPredicted RBP17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 MROH8Q9H579 483 aa17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 MTMR7Q9Y216 660 aa17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 RIPK3Q9Y572 518 aa17.95■□□□□ 0.46
SNRPA1-213ENST00000560856 STRNO43815 780 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 ZBED4O75132 1171 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 FDX1P10109 184 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 ANTXR2P58335 489 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 ZNF543Q08ER8 600 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 WDR78Q5VTH9 848 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 NCAPG2Q86XI2 1143 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 PNMA1Q8ND90 353 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 NCOA7Q8NI08 942 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 TRIB2Q92519 343 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 PRR12Q9ULL5 1215 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 ZNF536O15090 1300 aa17.94■□□□□ 0.46
SNRPA1-213ENST00000560856 BRCA2P51587 3418 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 COBLO75128 1261 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 INHAP05111 366 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 RGS2P41220 211 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 OAZ1P54368 228 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 TRIM32Q13049 653 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 TRDNQ13061 729 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 CCL14Q16627 93 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 CCDC96Q2M329 555 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 CASC1Q6TDU7 716 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 ABRAQ8N0Z2 381 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 NPLOC4Q8TAT6 608 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 UBAC1Q9BSL1 405 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 TEX13BQ9BXU2 312 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 SENP2Q9HC62 589 aa17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 RAVER2Q9HCJ3 691 aaKnown RBP17.93■□□□□ 0.46
SNRPA1-213ENST00000560856 MYCP01106 439 aaPredicted RBP17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 HMGCRP04035 888 aa17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 ADORA2AP29274 412 aa17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 SLC16A2P36021 539 aa17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 SNRNP48Q6IEG0 339 aaKnown RBP17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 CPXCR1Q8N123 301 aa17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 IGDCC4Q8TDY8 1250 aa17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 APBA2Q99767 749 aa17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 GPCPD1Q9NPB8 672 aa17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 FLRT1Q9NZU1 646 aa17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 IVNS1ABPQ9Y6Y0 642 aa17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 FRMPD2Q68DX3 1309 aaPredicted RBP17.92■□□□□ 0.46
SNRPA1-213ENST00000560856 CCL5P13501 91 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 COPB2P35606 906 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 SNAP25P60880 206 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 UBXN2AP68543 259 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 TSGA10IPQ3SY00 556 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 MAP3K21Q5TCX8 1036 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 CHST3Q7LGC8 479 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 RALYLQ86SE5 291 aaKnown RBP17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 RASEFQ8IZ41 740 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 UNC93B1Q9H1C4 597 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 KAT14Q9H8E8 782 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 CWC22Q9HCG8 908 aaKnown RBP17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 BIN2Q9UBW5 565 aaPredicted RBP17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 ISY1Q9ULR0 285 aaKnown RBP17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 ZNF236Q9UL36 1845 aa17.91■□□□□ 0.46
SNRPA1-213ENST00000560856 FCER1AP12319 257 aa17.9■□□□□ 0.46
SNRPA1-213ENST00000560856 IKQ13123 557 aaPredicted RBP17.9■□□□□ 0.46
SNRPA1-213ENST00000560856 IFIT1BQ5T764 474 aaKnown RBP17.9■□□□□ 0.46
SNRPA1-213ENST00000560856 SYDE2Q5VT97 1194 aa17.9■□□□□ 0.46
SNRPA1-213ENST00000560856 TRMT44Q8IYL2 757 aaKnown RBP17.9■□□□□ 0.46
SNRPA1-213ENST00000560856 KCNB2Q92953 911 aa17.9■□□□□ 0.46
SNRPA1-213ENST00000560856 AGBL1Q96MI9 1066 aa17.9■□□□□ 0.46
SNRPA1-213ENST00000560856 RANBP17Q9H2T7 1088 aaKnown RBP17.9■□□□□ 0.46
SNRPA1-213ENST00000560856 ZNFX1Q9P2E3 1918 aaKnown RBP17.9■□□□□ 0.46
SNRPA1-213ENST00000560856 SMCHD1A6NHR9 2005 aa17.89■□□□□ 0.46
SNRPA1-213ENST00000560856 RBBP6Q7Z6E9 1792 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-213ENST00000560856 IFIT3O14879 490 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-213ENST00000560856 GOLGA8HP0CJ92 632 aa17.89■□□□□ 0.45
SNRPA1-213ENST00000560856 EN2P19622 333 aaPredicted RBP17.89■□□□□ 0.45
SNRPA1-213ENST00000560856 GPATCH4Q5T3I0 446 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-213ENST00000560856 MTA3Q9BTC8 594 aa17.89■□□□□ 0.45
SNRPA1-213ENST00000560856 TMEM106CQ9BVX2 250 aa17.89■□□□□ 0.45
SNRPA1-213ENST00000560856 CPVLQ9H3G5 476 aa17.89■□□□□ 0.45
SNRPA1-213ENST00000560856 GPHNQ9NQX3 736 aaPredicted RBP17.89■□□□□ 0.45
SNRPA1-213ENST00000560856 DNAJC25-GNG10A0A024R161 153 aa17.88■□□□□ 0.45
SNRPA1-213ENST00000560856 GJB1P08034 283 aa17.88■□□□□ 0.45
SNRPA1-213ENST00000560856 ZKSCAN1P17029 563 aaPredicted RBP17.88■□□□□ 0.45
SNRPA1-213ENST00000560856 CACNB2Q08289 660 aaPredicted RBP17.88■□□□□ 0.45
SNRPA1-213ENST00000560856 DPP9Q86TI2 863 aa17.88■□□□□ 0.45
SNRPA1-213ENST00000560856 CHST13Q8NET6 341 aa17.88■□□□□ 0.45
SNRPA1-213ENST00000560856 MMP19Q99542 508 aa17.88■□□□□ 0.45
SNRPA1-213ENST00000560856 RNF208Q9H0X6 261 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms