RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 HTATIP2Q9BUP3 242 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 C11orf49Q9H6J7 331 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 GOPCQ9HD26 462 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 IVNS1ABPQ9Y6Y0 642 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 CDH23Q9H251 3354 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 SOX1O00570 391 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-210ENST00000560825 PDE4AP27815 886 aa13.31□□□□□ -0.28
GABPB1-210ENST00000560825 FXR2P51116 673 aaKnown RBP eCLIP13.31□□□□□ -0.28
GABPB1-210ENST00000560825 IRX5P78411 483 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-210ENST00000560825 NUCB1Q02818 461 aa13.31□□□□□ -0.28
GABPB1-210ENST00000560825 CHD1LQ86WJ1 897 aa13.31□□□□□ -0.28
GABPB1-210ENST00000560825 RIOX2Q8IUF8 465 aa13.31□□□□□ -0.28
GABPB1-210ENST00000560825 ANKLE1Q8NAG6 615 aa13.31□□□□□ -0.28
GABPB1-210ENST00000560825 FGD4Q96M96 766 aa13.31□□□□□ -0.28
GABPB1-210ENST00000560825 SLF1Q9BQI6 1058 aa13.31□□□□□ -0.28
GABPB1-210ENST00000560825 RAVER2Q9HCJ3 691 aaKnown RBP13.31□□□□□ -0.28
GABPB1-210ENST00000560825 FGAP02671 866 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 TSPY3P0CV98 308 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 TSPY8P0CW00 308 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 HSPD1P10809 573 aaKnown RBP13.3□□□□□ -0.28
GABPB1-210ENST00000560825 STAT3P40763 770 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 SLC4A3P48751 1232 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 HAND2P61296 217 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 ZNF792Q3KQV3 632 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 GJC2Q5T442 439 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-210ENST00000560825 MFSD14CQ5VZR4 134 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 SNRNP48Q6IEG0 339 aaKnown RBP13.3□□□□□ -0.28
GABPB1-210ENST00000560825 TRMT44Q8IYL2 757 aaKnown RBP13.3□□□□□ -0.28
GABPB1-210ENST00000560825 ZNF444Q8N0Y2 327 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-210ENST00000560825 MB21D1Q8N884 522 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 RILPL2Q969X0 211 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 KIFC2Q96AC6 838 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 MROH8Q9H579 483 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 DDX20Q9UHI6 824 aaKnown RBP13.3□□□□□ -0.28
GABPB1-210ENST00000560825 ADCY6O43306 1168 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 STRNO43815 780 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 TTLL1O95922 423 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 PTGS1P23219 599 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 OLFML2BQ68BL8 750 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 SLFN13Q68D06 897 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 KCTD1Q719H9 257 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 TBC1D10CQ8IV04 446 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 CPXCR1Q8N123 301 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 MMP19Q99542 508 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
GABPB1-210ENST00000560825 ZNF536O15090 1300 aa13.29□□□□□ -0.28
GABPB1-210ENST00000560825 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
GABPB1-210ENST00000560825 FCER1AP12319 257 aa13.29□□□□□ -0.28
GABPB1-210ENST00000560825 MCCP23508 829 aa13.29□□□□□ -0.28
GABPB1-210ENST00000560825 ATN1P54259 1190 aaPredicted RBP13.29□□□□□ -0.28
GABPB1-210ENST00000560825 GMCL1P1Q8NEA9 526 aa13.29□□□□□ -0.28
GABPB1-210ENST00000560825 NACAP1Q9BZK3 213 aa13.29□□□□□ -0.28
GABPB1-210ENST00000560825 SLC38A10Q9HBR0 1119 aa13.29□□□□□ -0.28
GABPB1-210ENST00000560825 HELLSQ9NRZ9 838 aa13.29□□□□□ -0.28
GABPB1-210ENST00000560825 ANAPC4Q9UJX5 808 aa13.29□□□□□ -0.28
GABPB1-210ENST00000560825 DNAJC25-GNG10A0A024R161 153 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 TMEM232C9JQI7 657 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 FGRP09769 529 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 SDSP20132 328 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 PDE4BQ07343 736 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 MCMDC2Q4G0Z9 681 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 TTBK2Q6IQ55 1244 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 ABRAQ8N0Z2 381 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 PRPF38AQ8NAV1 312 aaKnown RBP13.28□□□□□ -0.28
GABPB1-210ENST00000560825 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 AGBL1Q96MI9 1066 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 GDF15Q99988 308 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 SENP6Q9GZR1 1112 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-210ENST00000560825 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-210ENST00000560825 ASTN1O14525 1302 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 NEDD4P46934 1319 aa13.28□□□□□ -0.28
GABPB1-210ENST00000560825 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 RANBP6O60518 1105 aaKnown RBP13.27□□□□□ -0.29
GABPB1-210ENST00000560825 SLC25A27O95847 323 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 SNAI1O95863 264 aaPredicted RBP13.27□□□□□ -0.29
GABPB1-210ENST00000560825 ZNF865P0CJ78 1059 aaPredicted RBP13.27□□□□□ -0.29
GABPB1-210ENST00000560825 BMP3P12645 472 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 MAGEA10P43363 369 aaPredicted RBP13.27□□□□□ -0.29
GABPB1-210ENST00000560825 NOVP48745 357 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 ALX1Q15699 326 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
GABPB1-210ENST00000560825 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.29
GABPB1-210ENST00000560825 RCSD1Q6JBY9 416 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 PURBQ96QR8 312 aaKnown RBP13.27□□□□□ -0.29
GABPB1-210ENST00000560825 TINF2Q9BSI4 451 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 OSBPL3Q9H4L5 887 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 HOMER2Q9NSB8 354 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 STX8Q9UNK0 236 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 NR2E3Q9Y5X4 410 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 CCDC171Q6TFL3 1326 aa13.27□□□□□ -0.29
GABPB1-210ENST00000560825 TSPY2A6NKD2 308 aa13.26□□□□□ -0.29
GABPB1-210ENST00000560825 SEPT4O43236 478 aa13.26□□□□□ -0.29
GABPB1-210ENST00000560825 GSPT1P15170 499 aaKnown RBP13.26□□□□□ -0.29
GABPB1-210ENST00000560825 CNTN2Q02246 1040 aa13.26□□□□□ -0.29
GABPB1-210ENST00000560825 TMEM63BQ5T3F8 832 aa13.26□□□□□ -0.29
GABPB1-210ENST00000560825 CWC27Q6UX04 472 aaKnown RBP13.26□□□□□ -0.29
GABPB1-210ENST00000560825 SKAP1Q86WV1 359 aa13.26□□□□□ -0.29
GABPB1-210ENST00000560825 FERMT2Q96AC1 680 aa13.26□□□□□ -0.29
GABPB1-210ENST00000560825 ZKSCAN3Q9BRR0 538 aa13.26□□□□□ -0.29
GABPB1-210ENST00000560825 TEX13BQ9BXU2 312 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms