RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TPTE2Q6XPS3 522 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 SH3RF1Q7Z6J0 888 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 RTF1Q92541 710 aaKnown RBP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 AAASQ9NRG9 546 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 SUCOQ9UBS9 1254 aaKnown RBP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 PCDHB10Q9UN67 800 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 V9GYY5 206 aaPredicted RBP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 NSD2O96028 1365 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 PF4V1P10720 104 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 CCDC183Q5T5S1 534 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 CEP135Q66GS9 1140 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 PTCRAQ6ISU1 281 aaPredicted RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 PKN3Q6P5Z2 889 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 BNC2Q6ZN30 1099 aaPredicted RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 DDX46Q7L014 1031 aaKnown RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 SNX32Q86XE0 403 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 IQUBQ8NA54 791 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 LATS2Q9NRM7 1088 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 RBM28Q9NW13 759 aaKnown RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 SH3BP1Q9Y3L3 701 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 KPNA6O60684 536 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 MICAL2O94851 1124 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 MAP3K6O95382 1288 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 MT-CO1P00395 513 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 CCNYL3P0C7X3 344 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 PNMA6AP0CW24 399 aaPredicted RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 CCNFP41002 786 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 EIF6P56537 245 aaKnown RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 CCDC92Q53HC0 331 aaPredicted RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 SNAP47Q5SQN1 464 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 GPATCH4Q5T3I0 446 aaKnown RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 NBPF14Q5TI25 921 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 MCTP2Q6DN12 878 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 TREML1Q86YW5 311 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 RELL1Q8IUW5 271 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 FOXJ1Q92949 421 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 FBRSQ9HAH7 460 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 RIMS2Q9UQ26 1411 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 MAGED1Q9Y5V3 778 aaPredicted RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 AP5Z1O43299 807 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 PTGS1P23219 599 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 PCBP1Q15365 356 aaKnown RBP eCLIP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 PUM3Q15397 648 aaKnown RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 SAFBQ15424 915 aaKnown RBP eCLIP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 JAKMIP3Q5VZ66 844 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 CFAP161Q6P656 301 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 C3orf67Q6ZVT6 689 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 SH3BP5LQ7L8J4 393 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 SPC24Q8NBT2 197 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 RIN3Q8TB24 985 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 SMARCE1Q969G3 411 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 RHOVQ96L33 236 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 ESF1Q9H501 851 aaKnown RBP7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 STK26Q9P289 416 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 STRIP2Q9ULQ0 834 aa7.69□□□□□ -1.18
TSPAN3-209ENST00000560715 ANKRD26Q9UPS8 1709 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 SHPRHQ149N8 1683 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 TRDNQ13061 729 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 CHD1LQ86WJ1 897 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 PASD1Q8IV76 773 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 DZIP1LQ8IYY4 767 aaKnown RBP7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 KIAA1958Q8N8K9 716 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 STRBPQ96SI9 672 aaKnown RBP7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 ELAC2Q9BQ52 826 aaKnown RBP7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 ZNF700Q9H0M5 742 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 VTA1Q9NP79 307 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 RRN3Q9NYV6 651 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 PHTF1Q9UMS5 762 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 LHX6Q9UPM6 363 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 AKAP2Q9Y2D5 859 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 GPSM3Q9Y4H4 160 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 ST5P78524 1137 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 GRM2Q14416 872 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 SEPT7Q16181 437 aaKnown RBP7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 TPD52L1Q16890 204 aaPredicted RBP7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 RSRC2Q7L4I2 434 aaKnown RBP7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 RPAINQ86UA6 219 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 TMEM87BQ96K49 555 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 UBXN6Q9BZV1 441 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 RIC8AQ9NPQ8 531 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 FAM86C1Q9NVL1 165 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 ZFATQ9P243 1243 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 GTF2IRD1Q9UHL9 959 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 NRXN3Q9Y4C0 1643 aa7.68□□□□□ -1.18
TSPAN3-209ENST00000560715 CCDC196A0A1B0GTZ2 297 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 ST18O60284 1047 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 TMEM127O75204 238 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 ABLIM3O94929 683 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 SLU7O95391 586 aaKnown RBP7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 PYGLP06737 847 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 GLULP15104 373 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 MX1P20591 662 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 MAP2K2P36507 400 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 GTF2A2P52657 109 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 GRIN2CQ14957 1233 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 ARHGAP29Q52LW3 1261 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 LRCH2Q5VUJ6 765 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms