RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 GPS2Q13227 327 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 C12orf60Q5U649 245 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 DESI2Q9BSY9 194 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 COL24A1Q17RW2 1714 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 BAG3O95817 575 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 LDHCP07864 332 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 SMARCA1P28370 1054 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 KARSQ15046 597 aaKnown RBP19.94■□□□□ 0.78
TRPM1-211ENST00000560658 TSR1Q2NL82 804 aaKnown RBP19.94■□□□□ 0.78
TRPM1-211ENST00000560658 RCSD1Q6JBY9 416 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 DZIP1Q86YF9 867 aaKnown RBP19.94■□□□□ 0.78
TRPM1-211ENST00000560658 ADSSL1Q8N142 457 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 RETREG2Q8NC44 543 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 CELF1Q92879 486 aaKnown RBP19.94■□□□□ 0.78
TRPM1-211ENST00000560658 DHTKD1Q96HY7 919 aaPredicted RBP19.94■□□□□ 0.78
TRPM1-211ENST00000560658 NAPGQ99747 312 aaPredicted RBP19.94■□□□□ 0.78
TRPM1-211ENST00000560658 NUP58Q9BVL2 599 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 NARFQ9UHQ1 456 aa19.94■□□□□ 0.78
TRPM1-211ENST00000560658 USP5P45974 858 aa19.93■□□□□ 0.78
TRPM1-211ENST00000560658 PPP4CP60510 307 aa19.93■□□□□ 0.78
TRPM1-211ENST00000560658 FAM114A1Q8IWE2 563 aa19.93■□□□□ 0.78
TRPM1-211ENST00000560658 MSANTD4Q8NCY6 345 aa19.93■□□□□ 0.78
TRPM1-211ENST00000560658 EHBP1Q8NDI1 1231 aa19.93■□□□□ 0.78
TRPM1-211ENST00000560658 PARD6BQ9BYG5 372 aa19.93■□□□□ 0.78
TRPM1-211ENST00000560658 hCG_1642624A0A1W2PR95 340 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 M0R2N6 131 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 WNT7AO00755 349 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 PSMA7O14818 248 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 PTPN21Q16825 1174 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 KIF4BQ2VIQ3 1234 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 PNMA1Q8ND90 353 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 SETDB2Q96T68 719 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 NUP88Q99567 741 aaPredicted RBP19.92■□□□□ 0.78
TRPM1-211ENST00000560658 MAGEC2Q9UBF1 373 aaPredicted RBP19.92■□□□□ 0.78
TRPM1-211ENST00000560658 RAB21Q9UL25 225 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 LEMD3Q9Y2U8 911 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 BAZ2AQ9UIF9 1905 aaKnown RBP19.92■□□□□ 0.78
TRPM1-211ENST00000560658 MYH13Q9UKX3 1938 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 CCDC88AQ3V6T2 1871 aa19.92■□□□□ 0.78
TRPM1-211ENST00000560658 A0A0G2JS52 829 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 BICDL2A1A5D9 508 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 LGALS16A8MUM7 142 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 RHOBTB3O94955 611 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 TBC1D8O95759 1140 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 UBA7P41226 1012 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 FXR1P51114 621 aaKnown RBP eCLIP19.91■□□□□ 0.78
TRPM1-211ENST00000560658 MTF1Q14872 753 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 IL17AQ16552 155 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 COBLL1Q53SF7 1204 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 ZNF569Q5MCW4 686 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 TPTE2Q6XPS3 522 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 C3orf67Q6ZVT6 689 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 KRT25Q7Z3Z0 450 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 OR8K1Q8NGG5 319 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 LZTFL1Q9NQ48 299 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 MCM9Q9NXL9 1143 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 MKRN1Q9UHC7 482 aaKnown RBP19.91■□□□□ 0.78
TRPM1-211ENST00000560658 COL4A1P02462 1669 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 MCM3P25205 808 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 DNM2P50570 870 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 TFAP4Q01664 338 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 FAM47AQ5JRC9 791 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 C15orf52Q6ZUT6 534 aaKnown RBP19.91■□□□□ 0.78
TRPM1-211ENST00000560658 SMYD4Q8IYR2 804 aaPredicted RBP19.91■□□□□ 0.78
TRPM1-211ENST00000560658 LINC00116Q8NCU8 138 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 CPLX3Q8WVH0 158 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 HAUS4Q9H6D7 363 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 BARHL2Q9NY43 387 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 CALCOCO1Q9P1Z2 691 aa19.91■□□□□ 0.78
TRPM1-211ENST00000560658 hCG_1984214I3L0E3 225 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 RPS6KA4O75676 772 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 CYP2C19P33261 490 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 KRT9P35527 623 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 KRT83P78385 493 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 AMPD3Q01432 767 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 ZNF713Q8N859 430 aaPredicted RBP19.9■□□□□ 0.78
TRPM1-211ENST00000560658 GIMAP8Q8ND71 665 aaPredicted RBP19.9■□□□□ 0.78
TRPM1-211ENST00000560658 RPGRIP1Q96KN7 1286 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 MTRQ99707 1265 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 SPZ1Q9BXG8 430 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 BLZF1Q9H2G9 400 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 KBTBD4Q9NVX7 518 aa19.9■□□□□ 0.78
TRPM1-211ENST00000560658 KAT6BQ8WYB5 2073 aa19.89■□□□□ 0.77
TRPM1-211ENST00000560658 EIF3JO75822 258 aaKnown RBP19.89■□□□□ 0.77
TRPM1-211ENST00000560658 LDHBP07195 334 aaKnown RBP19.89■□□□□ 0.77
TRPM1-211ENST00000560658 PARP1P09874 1014 aaKnown RBP19.89■□□□□ 0.77
TRPM1-211ENST00000560658 CASP1P29466 404 aa19.89■□□□□ 0.77
TRPM1-211ENST00000560658 CCT6AP40227 531 aaKnown RBP19.89■□□□□ 0.77
TRPM1-211ENST00000560658 PRCPP42785 496 aa19.89■□□□□ 0.77
TRPM1-211ENST00000560658 UBXN1Q04323 297 aa19.89■□□□□ 0.77
TRPM1-211ENST00000560658 NBPF5PQ86XG9 351 aaPredicted RBP19.89■□□□□ 0.77
TRPM1-211ENST00000560658 ZNF444Q8N0Y2 327 aaPredicted RBP19.89■□□□□ 0.77
TRPM1-211ENST00000560658 MB21D1Q8N884 522 aa19.89■□□□□ 0.77
TRPM1-211ENST00000560658 DNAJC7Q99615 494 aa19.89■□□□□ 0.77
TRPM1-211ENST00000560658 MKNK2Q9HBH9 465 aa19.89■□□□□ 0.77
TRPM1-211ENST00000560658 CAPN11Q9UMQ6 739 aa19.89■□□□□ 0.77
TRPM1-211ENST00000560658 LUC7L2Q9Y383 392 aaKnown RBP19.89■□□□□ 0.77
TRPM1-211ENST00000560658 CASZ1Q86V15 1759 aa19.89■□□□□ 0.77
TRPM1-211ENST00000560658 IRS2Q9Y4H2 1338 aa19.89■□□□□ 0.77
TRPM1-211ENST00000560658 CTAGE15A4D2H0 777 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms