RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 LAMA4Q16363 1823 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 RPTORQ8N122 1335 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 B4E1Z4 1266 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 TOP1P11387 765 aaKnown RBP15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 GJA8P48165 433 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 TRDNQ13061 729 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 KCTD2Q14681 263 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 MFSD14CQ5VZR4 134 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 RCSD1Q6JBY9 416 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 KIAA1211Q6ZU35 1233 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 FAM160B2Q86V87 743 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 U2AF1L4Q8WU68 220 aaKnown RBP15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 MMP19Q99542 508 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 TMEM47Q9BQJ4 181 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 TEX13BQ9BXU2 312 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 KRT23Q9C075 422 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 CNNM2Q9H8M5 875 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 RAVER2Q9HCJ3 691 aaKnown RBP15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 TCP11L1Q9NUJ3 509 aa15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 ZNF214Q9UL59 606 aaPredicted RBP15.27■□□□□ 0.04
CTDSPL2-209ENST00000560620 SGSM2O43147 1006 aa15.26■□□□□ 0.03
CTDSPL2-209ENST00000560620 SGPL1O95470 568 aa15.26■□□□□ 0.03
CTDSPL2-209ENST00000560620 COPB2P35606 906 aa15.26■□□□□ 0.03
CTDSPL2-209ENST00000560620 PTH1RQ03431 593 aa15.26■□□□□ 0.03
CTDSPL2-209ENST00000560620 RIOX2Q8IUF8 465 aa15.26■□□□□ 0.03
CTDSPL2-209ENST00000560620 NPLOC4Q8TAT6 608 aa15.26■□□□□ 0.03
CTDSPL2-209ENST00000560620 DCAF4Q8WV16 495 aa15.26■□□□□ 0.03
CTDSPL2-209ENST00000560620 TTC14Q96N46 770 aa15.26■□□□□ 0.03
CTDSPL2-209ENST00000560620 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
CTDSPL2-209ENST00000560620 FRMPD2Q68DX3 1309 aaPredicted RBP15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 CNGA1P29973 690 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 CACNB2Q08289 660 aaPredicted RBP15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 CCDC178Q5BJE1 867 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 RASGRP2Q7LDG7 609 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 ABRAQ8N0Z2 381 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 REPS2Q8NFH8 660 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 DDX11Q96FC9 970 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 UBAC1Q9BSL1 405 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 KAT14Q9H8E8 782 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 SLC38A10Q9HBR0 1119 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 GPCPD1Q9NPB8 672 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 HOMER2Q9NSB8 354 aa15.25■□□□□ 0.03
CTDSPL2-209ENST00000560620 PGK2P07205 417 aa15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 FDX1P10109 184 aa15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 NT5C2P49902 561 aa15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 BMP2KLQ5H9B9 411 aa15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 CCDC174Q6PII3 467 aa15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 CASC1Q6TDU7 716 aa15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 RALYLQ86SE5 291 aaKnown RBP15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 SHISA4Q96DD7 197 aa15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 ZSCAN10Q96SZ4 725 aaPredicted RBP15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 PAK6Q9NQU5 681 aaPredicted RBP15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 FLRT1Q9NZU1 646 aa15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 ZSWIM5Q9P217 1185 aa15.24■□□□□ 0.03
CTDSPL2-209ENST00000560620 TNRC18O15417 2968 aaPredicted RBP15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 COBLO75128 1261 aa15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 HOXC6P09630 235 aa15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 CYP2C19P33261 490 aa15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 SLC16A2P36021 539 aa15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 NOVP48745 357 aa15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 SNAP25P60880 206 aa15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 DGKHQ86XP1 1220 aa15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 ANKRD35Q8N283 1001 aa15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 PRR12Q9ULL5 1215 aa15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 RIPK3Q9Y572 518 aa15.23■□□□□ 0.03
CTDSPL2-209ENST00000560620 TNKSO95271 1327 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 ATP2A1O14983 1001 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 FARP2O94887 1054 aaPredicted RBP15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 CYP21A2P08686 494 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 PDHBP11177 359 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 CCND3P30281 292 aaPredicted RBP15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 OAZ1P54368 228 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 MAP3K21Q5TCX8 1036 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 TTBK2Q6IQ55 1244 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 PNMA1Q8ND90 353 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 ESYT1Q9BSJ8 1104 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 ANO2Q9NQ90 1003 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 FBXO40Q9UH90 709 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 RBM8AQ9Y5S9 174 aaKnown RBP15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 ZNF236Q9UL36 1845 aa15.22■□□□□ 0.03
CTDSPL2-209ENST00000560620 MKI67P46013 3256 aaKnown RBP15.21■□□□□ 0.03
CTDSPL2-209ENST00000560620 ZNFX1Q9P2E3 1918 aaKnown RBP15.21■□□□□ 0.03
CTDSPL2-209ENST00000560620 ERICH2A1L162 156 aa15.21■□□□□ 0.03
CTDSPL2-209ENST00000560620 ALAS1P13196 640 aa15.21■□□□□ 0.03
CTDSPL2-209ENST00000560620 IFIT1BQ5T764 474 aaKnown RBP15.21■□□□□ 0.03
CTDSPL2-209ENST00000560620 MAP4K1Q92918 833 aa15.21■□□□□ 0.03
CTDSPL2-209ENST00000560620 MAML3Q96JK9 1138 aa15.21■□□□□ 0.03
CTDSPL2-209ENST00000560620 AGBL1Q96MI9 1066 aa15.21■□□□□ 0.03
CTDSPL2-209ENST00000560620 E7EWF7 191 aa15.2■□□□□ 0.02
CTDSPL2-209ENST00000560620 PLA2G6O60733 806 aa15.2■□□□□ 0.02
CTDSPL2-209ENST00000560620 GOLGA8HP0CJ92 632 aa15.2■□□□□ 0.02
CTDSPL2-209ENST00000560620 SYDE2Q5VT97 1194 aa15.2■□□□□ 0.02
CTDSPL2-209ENST00000560620 OLFML2BQ68BL8 750 aa15.2■□□□□ 0.02
CTDSPL2-209ENST00000560620 ENAHQ8N8S7 591 aaPredicted RBP15.2■□□□□ 0.02
CTDSPL2-209ENST00000560620 CHST13Q8NET6 341 aa15.2■□□□□ 0.02
CTDSPL2-209ENST00000560620 NCOA7Q8NI08 942 aa15.2■□□□□ 0.02
CTDSPL2-209ENST00000560620 DPF3Q92784 378 aa15.2■□□□□ 0.02
CTDSPL2-209ENST00000560620 ACAD9Q9H845 621 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms