RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 WDR78Q5VTH9 848 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 KIAA1211Q6ZU35 1233 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 CTU1Q7Z7A3 348 aaKnown RBP9.48□□□□□ -0.89
LRRC28-219ENST00000560483 SKAP1Q86WV1 359 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 SPICE1Q8N0Z3 855 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 SPRYD3Q8NCJ5 442 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 PROCA1Q8NCQ7 364 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-219ENST00000560483 ACER1Q8TDN7 264 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 CHMP4CQ96CF2 233 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 WDR18Q9BV38 432 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 EFCC1Q9HA90 598 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 GOPCQ9HD26 462 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 ZCCHC17Q9NP64 241 aaKnown RBP9.48□□□□□ -0.89
LRRC28-219ENST00000560483 PPP4R2Q9NY27 417 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 MTMR7Q9Y216 660 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 CCDC85CA6NKD9 419 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 ZNF213O14771 459 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 DGAT1O75907 488 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 TFAP4Q01664 338 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 FAM47AQ5JRC9 791 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 GPAT2Q6NUI2 795 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 MFSD6Q6ZSS7 791 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 TICAM2Q86XR7 235 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 ANKRD13CQ8N6S4 541 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 MCOLN1Q9GZU1 580 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 TMEM134Q9H6X4 195 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 KANSL2Q9H9L4 492 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 CTDP1Q9Y5B0 961 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-219ENST00000560483 ADGRG1Q9Y653 693 aa9.47□□□□□ -0.89
LRRC28-219ENST00000560483 USP17L15C9J2P7 530 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 USP17L11C9JVI0 530 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 USP17L18D6R9N7 530 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 USP17L22D6RA61 530 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 USP17L19D6RCP7 530 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 USP17L20D6RJB6 530 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 FGAP02671 866 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 EEF2P13639 858 aaKnown RBP9.46□□□□□ -0.9
LRRC28-219ENST00000560483 RASA1P20936 1047 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 PSMC4P43686 418 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 USP17L24Q0WX57 530 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 IKQ13123 557 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-219ENST00000560483 PTGDRQ13258 359 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 IMMTQ16891 758 aaKnown RBP9.46□□□□□ -0.9
LRRC28-219ENST00000560483 ASCC2Q9H1I8 757 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-219ENST00000560483 RPAP3Q9H6T3 665 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-219ENST00000560483 AAASQ9NRG9 546 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 CLIP2Q9UDT6 1046 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 CTNNA3Q9UI47 895 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 STX8Q9UNK0 236 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 SLC45A1Q9Y2W3 748 aa9.46□□□□□ -0.9
LRRC28-219ENST00000560483 MYH4Q9Y623 1939 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 TNPO2O14787 897 aaKnown RBP9.45□□□□□ -0.9
LRRC28-219ENST00000560483 ACTN4O43707 911 aaKnown RBP9.45□□□□□ -0.9
LRRC28-219ENST00000560483 FLOT1O75955 427 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 MYCP01106 439 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-219ENST00000560483 VCAM1P19320 739 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 DNAJB2P25686 324 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 HOXD10P28358 340 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 GUCY1A2P33402 732 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 GCLCP48506 637 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-219ENST00000560483 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 FCGRTP55899 365 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 MOGSQ13724 837 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 PLS1Q14651 629 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 RAET1EQ8TD07 263 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 CFHR5Q9BXR6 569 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 KIAA1683Q9H0B3 1180 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 RNF41Q9H4P4 317 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-219ENST00000560483 INCENPQ9NQS7 918 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 PKD2L1Q9P0L9 805 aa9.45□□□□□ -0.9
LRRC28-219ENST00000560483 BIN2Q9UBW5 565 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-219ENST00000560483 RCCD1A6NED2 376 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 TTLL1O95922 423 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 CHMLP26374 656 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 HERVK_113P62684 666 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 LACTBP83111 547 aaPredicted RBP9.44□□□□□ -0.9
LRRC28-219ENST00000560483 TRDNQ13061 729 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 ALX1Q15699 326 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 PKN2Q16513 984 aaKnown RBP9.44□□□□□ -0.9
LRRC28-219ENST00000560483 NOM1Q5C9Z4 860 aaKnown RBP9.44□□□□□ -0.9
LRRC28-219ENST00000560483 OTOP1Q7RTM1 612 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 LRRC47Q8N1G4 583 aaKnown RBP9.44□□□□□ -0.9
LRRC28-219ENST00000560483 COA7Q96BR5 231 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 ABHD8Q96I13 439 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 P2RX7Q99572 595 aaKnown RBP9.44□□□□□ -0.9
LRRC28-219ENST00000560483 ARHGAP39Q9C0H5 1083 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 RAD50Q92878 1312 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 ROBO3Q96MS0 1386 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 LOC285556D6RIA3 1793 aa9.44□□□□□ -0.9
LRRC28-219ENST00000560483 A0A1W2PRG0 241 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 ADH1BP00325 375 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 CCNA1P78396 465 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 CCDC96Q2M329 555 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 SLC9C1Q4G0N8 1177 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 FAM83BQ5T0W9 1011 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 AKNAD1Q5T1N1 836 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms