RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 PTPRFP10586 1907 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 FOXN1O15353 648 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 TLR2O60603 784 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 EIF5BO60841 1220 aaKnown RBP10.6□□□□□ -0.71
HMG20A-209ENST00000559728 BCRP11274 1271 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 HERVK_113P62684 666 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 ZNF543Q08ER8 600 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 BTNL9Q6UXG8 535 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 Q6ZUG5 572 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 STAG2Q8N3U4 1231 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 DCAF4Q8WV16 495 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 MYL10Q9BUA6 226 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 KAT14Q9H8E8 782 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 BTBD7Q9P203 1132 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 RBPJLQ9UBG7 517 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 MAD2L2Q9UI95 211 aa10.6□□□□□ -0.71
HMG20A-209ENST00000559728 FRMPD2Q68DX3 1309 aaPredicted RBP10.59□□□□□ -0.71
HMG20A-209ENST00000559728 PALM3A6NDB9 673 aaPredicted RBP10.59□□□□□ -0.71
HMG20A-209ENST00000559728 PLA2G6O60733 806 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 ALDH1A1P00352 501 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 GOLGA8HP0CJ92 632 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 HSPA1AP0DMV8 641 aaKnown RBP10.59□□□□□ -0.71
HMG20A-209ENST00000559728 HSPA1BP0DMV9 641 aaKnown RBP10.59□□□□□ -0.71
HMG20A-209ENST00000559728 BMP3P12645 472 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 PSMA5P28066 241 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 CTGFP29279 349 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 SLC1A4P43007 532 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 IRX5P78411 483 aaPredicted RBP10.59□□□□□ -0.71
HMG20A-209ENST00000559728 COG2Q14746 738 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 TAF1CQ15572 869 aaPredicted RBP10.59□□□□□ -0.71
HMG20A-209ENST00000559728 Q3C1V9 767 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 KCTD1Q719H9 257 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 NBPF11Q86T75 865 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 ZNF654Q8IZM8 581 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 BRF1Q92994 677 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 ATG4CQ96DT6 458 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 ALDH8A1Q9H2A2 487 aaPredicted RBP10.59□□□□□ -0.71
HMG20A-209ENST00000559728 CPVLQ9H3G5 476 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
HMG20A-209ENST00000559728 TSKSQ9UJT2 592 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 PPP1R9AQ9ULJ8 1098 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 HPS5Q9UPZ3 1129 aa10.59□□□□□ -0.71
HMG20A-209ENST00000559728 MYPNQ86TC9 1320 aa10.58□□□□□ -0.71
HMG20A-209ENST00000559728 TMEM232C9JQI7 657 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 CYTH3O43739 400 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 RAD21O60216 631 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 HSPA8P11142 646 aaKnown RBP10.58□□□□□ -0.72
HMG20A-209ENST00000559728 RXRAP19793 462 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 OSBPP22059 807 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 SLC16A2P36021 539 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 APOBRQ0VD83 1088 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 PABPC4Q13310 644 aaKnown RBP eCLIP10.58□□□□□ -0.72
HMG20A-209ENST00000559728 GRM4Q14833 912 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 SART3Q15020 963 aaKnown RBP10.58□□□□□ -0.72
HMG20A-209ENST00000559728 OTUD7BQ6GQQ9 843 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 APOA5Q6Q788 366 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 RAB11FIP4Q86YS3 637 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 SPRYD3Q8NCJ5 442 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 PARK7Q99497 189 aaKnown RBP10.58□□□□□ -0.72
HMG20A-209ENST00000559728 LARP6Q9BRS8 491 aaKnown RBP10.58□□□□□ -0.72
HMG20A-209ENST00000559728 TANGO6Q9C0B7 1094 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 UBA5Q9GZZ9 404 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 ZFYVE28Q9HCC9 887 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 MORF4L1Q9UBU8 362 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 CPA4Q9UI42 421 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 PRR12Q9ULL5 1215 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 MTMR7Q9Y216 660 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 CYP46A1Q9Y6A2 500 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 ZNF536O15090 1300 aa10.58□□□□□ -0.72
HMG20A-209ENST00000559728 RLFQ13129 1914 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 NID2Q14112 1375 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 ERICH2A1L162 156 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 GPR25O00155 361 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 VWA5AO00534 786 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 FLOT1O75955 427 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 DDAH1O94760 285 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 AK2P54819 239 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 SNAP25P60880 206 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 IRX3P78415 501 aaPredicted RBP10.57□□□□□ -0.72
HMG20A-209ENST00000559728 FUT2Q10981 343 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 TMEM132BQ14DG7 1078 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 NOM1Q5C9Z4 860 aaKnown RBP10.57□□□□□ -0.72
HMG20A-209ENST00000559728 TMTC2Q8N394 836 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 MTMR8Q96EF0 704 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 MAP3K14Q99558 947 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 SLF1Q9BQI6 1058 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 GPCPD1Q9NPB8 672 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 PDRG1Q9NUG6 133 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 FEM1BQ9UK73 627 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 PNMA3Q9UL41 463 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 ZNF214Q9UL59 606 aaPredicted RBP10.57□□□□□ -0.72
HMG20A-209ENST00000559728 TPCN1Q9ULQ1 816 aa10.57□□□□□ -0.72
HMG20A-209ENST00000559728 MYH8P13535 1937 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 KLF18A0A0U1RQI7 1052 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 POTEFA5A3E0 1075 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 GTPBP6O43824 516 aaPredicted RBP10.56□□□□□ -0.72
HMG20A-209ENST00000559728 PLEKHA8P1O95397 391 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
HMG20A-209ENST00000559728 LARGE1O95461 756 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms