RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 WDR46O15213 610 aaKnown RBP11.4□□□□□ -0.58
SPG11-214ENST00000558989 TTLL1O95922 423 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 NDUFB10O96000 172 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 CHMLP26374 656 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 DSG3P32926 999 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 BRCA2P51587 3418 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 PDE4DIPQ5VU43 2346 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 MFSD6Q6ZSS7 791 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 GPR142Q7Z601 462 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 LPAR1Q92633 364 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 ZNF333Q96JL9 665 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 TMEM106CQ9BVX2 250 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 IL17RBQ9NRM6 502 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 HOXC10Q9NYD6 342 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 RABGAP1Q9Y3P9 1069 aa11.4□□□□□ -0.58
SPG11-214ENST00000558989 A0A0G2JMZ2 1700 aa11.4□□□□□ -0.59
SPG11-214ENST00000558989 NEDD4P46934 1319 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 CENPBP07199 599 aaPredicted RBP11.39□□□□□ -0.59
SPG11-214ENST00000558989 PRMT2P55345 433 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 IKQ13123 557 aaPredicted RBP11.39□□□□□ -0.59
SPG11-214ENST00000558989 CAMK2BQ13554 666 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 AKNAD1Q5T1N1 836 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 SLFN13Q68D06 897 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 NCAPG2Q86XI2 1143 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 KIAA1522Q9P206 1035 aaPredicted RBP11.39□□□□□ -0.59
SPG11-214ENST00000558989 ANAPC4Q9UJX5 808 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 EN2P19622 333 aaPredicted RBP11.39□□□□□ -0.59
SPG11-214ENST00000558989 MCCP23508 829 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 CCNA1P78396 465 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 PTH1RQ03431 593 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 TRIM32Q13049 653 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 PLEKHH3Q7Z736 793 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 GTF3C2Q8WUA4 911 aaPredicted RBP11.39□□□□□ -0.59
SPG11-214ENST00000558989 KIFC2Q96AC6 838 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 ARMC5Q96C12 935 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 NUDT12Q9BQG2 462 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 PLXNA1Q9UIW2 1896 aa11.39□□□□□ -0.59
SPG11-214ENST00000558989 RBBP6Q7Z6E9 1792 aaKnown RBP11.39□□□□□ -0.59
SPG11-214ENST00000558989 MYH6P13533 1939 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 INHAP05111 366 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 MAPK4P31152 587 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 MLLT1Q03111 559 aaPredicted RBP11.38□□□□□ -0.59
SPG11-214ENST00000558989 LBX2Q6XYB7 198 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 KCTD1Q719H9 257 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 CPXCR1Q8N123 301 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 RUFY2Q8WXA3 655 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 PBXIP1Q96AQ6 731 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 MOV10L1Q9BXT6 1211 aaKnown RBP11.38□□□□□ -0.59
SPG11-214ENST00000558989 RNF208Q9H0X6 261 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 UNC93B1Q9H1C4 597 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 GJD2Q9UKL4 321 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 CTDP1Q9Y5B0 961 aaPredicted RBP11.38□□□□□ -0.59
SPG11-214ENST00000558989 PLIN4Q96Q06 1357 aa11.38□□□□□ -0.59
SPG11-214ENST00000558989 B4E1Z4 1266 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 TMEM232C9JQI7 657 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 ORC4O43929 436 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 KDM4AO75164 1064 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 CCL5P13501 91 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 ERCC3P19447 782 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 SNAP25P60880 206 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 UBXN2AP68543 259 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 TMEM132BQ14DG7 1078 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 CCL14Q16627 93 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 IMMTQ16891 758 aaKnown RBP11.37□□□□□ -0.59
SPG11-214ENST00000558989 CCDC96Q2M329 555 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 SLAIN1Q8ND83 568 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 SLF1Q9BQI6 1058 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 DSCC1Q9BVC3 393 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 SPATC1LQ9H0A9 340 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 PPP1R9AQ9ULJ8 1098 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 MCM3APO60318 1980 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 ZMYM6O95789 1325 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 FRMPD2Q68DX3 1309 aaPredicted RBP11.37□□□□□ -0.59
SPG11-214ENST00000558989 BMP3P12645 472 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 SLC1A4P43007 532 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 STAG1Q8WVM7 1258 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 SREK1Q8WXA9 508 aaKnown RBP11.37□□□□□ -0.59
SPG11-214ENST00000558989 TRIB2Q92519 343 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 MKL1Q969V6 931 aa11.37□□□□□ -0.59
SPG11-214ENST00000558989 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
SPG11-214ENST00000558989 RNF41Q9H4P4 317 aaPredicted RBP11.37□□□□□ -0.59
SPG11-214ENST00000558989 VWA5AO00534 786 aa11.36□□□□□ -0.59
SPG11-214ENST00000558989 PPP1R37O75864 691 aa11.36□□□□□ -0.59
SPG11-214ENST00000558989 TMEM47Q9BQJ4 181 aa11.36□□□□□ -0.59
SPG11-214ENST00000558989 RAVER2Q9HCJ3 691 aaKnown RBP11.36□□□□□ -0.59
SPG11-214ENST00000558989 CTNNA3Q9UI47 895 aa11.36□□□□□ -0.59
SPG11-214ENST00000558989 BRPF3Q9ULD4 1205 aa11.36□□□□□ -0.59
SPG11-214ENST00000558989 BAZ2BQ9UIF8 2168 aaKnown RBP11.36□□□□□ -0.59
SPG11-214ENST00000558989 RAD50Q92878 1312 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 SGSM2O43147 1006 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 FGRP09769 529 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 RGS2P41220 211 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 CCDC174Q6PII3 467 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 DPP9Q86TI2 863 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 GMCL1P1Q8NEA9 526 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 ESR2Q92731 530 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 MRRFQ96E11 262 aaKnown RBP11.35□□□□□ -0.59
SPG11-214ENST00000558989 GPCPD1Q9NPB8 672 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 ZKSCAN1P17029 563 aaPredicted RBP11.35□□□□□ -0.59
SPG11-214ENST00000558989 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms