RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 POLR3DP05423 398 aaPredicted RBP7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 CYP2C8P10632 490 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 PDE1AP54750 535 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 HMGCS2P54868 508 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 TREML2Q5T2D2 321 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 C17orf99Q6UX52 265 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 FASTKD5Q7L8L6 764 aaKnown RBP7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 APPBP2Q92624 585 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 ERO1AQ96HE7 468 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 STRBPQ96SI9 672 aaKnown RBP7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 WDR18Q9BV38 432 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 LNPKQ9C0E8 428 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 RWDD1Q9H446 243 aaPredicted RBP7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 ATP8A2Q9NTI2 1148 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 GINM1Q9NU53 330 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 AGTPBP1Q9UPW5 1226 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 TRIM17Q9Y577 477 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 SLC4A4Q9Y6R1 1079 aa7.24□□□□□ -1.25
CTDSPL2-204ENST00000558966 BRCA2P51587 3418 aa7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 CYP2D7A0A087X1C5 515 aa7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 CARNS1A5YM72 827 aa7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 M0R2C6 588 aa7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 ZFYP08048 801 aaPredicted RBP7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 PKN2Q16513 984 aaKnown RBP7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 B4GALNT3Q6L9W6 998 aa7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 SLC44A5Q8NCS7 719 aa7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 PARK7Q99497 189 aaKnown RBP7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 FSD1Q9BTV5 496 aa7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 ARHGAP39Q9C0H5 1083 aa7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 CPA4Q9UI42 421 aa7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 SLC45A1Q9Y2W3 748 aa7.23□□□□□ -1.25
CTDSPL2-204ENST00000558966 MGAMO43451 1857 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 GSG1L2A8MUP6 293 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 USP17L12C9JPN9 530 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 USP17L21D6R901 530 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 GPAA1O43292 621 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 BCRP11274 1271 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 CTGFP29279 349 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 GUCY1A2P33402 732 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 LACTBP83111 547 aaPredicted RBP7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 CERKLQ49MI3 558 aaPredicted RBP7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 C12orf60Q5U649 245 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 PTCRAQ6ISU1 281 aaPredicted RBP7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 FBXO46Q6PJ61 603 aaPredicted RBP7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 DYNLL2Q96FJ2 89 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 SEC62Q99442 399 aaKnown RBP7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 OCSTAMPQ9BR26 566 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 EFCC1Q9HA90 598 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 AS3MTQ9HBK9 375 aa7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 EPB41L4AQ9HCS5 686 aaPredicted RBP7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 KIAA0100Q14667 2235 aaKnown RBP7.22□□□□□ -1.25
CTDSPL2-204ENST00000558966 CCDC85CA6NKD9 419 aa7.21□□□□□ -1.25
CTDSPL2-204ENST00000558966 ATP9BO43861 1147 aa7.21□□□□□ -1.25
CTDSPL2-204ENST00000558966 BACE1P56817 501 aa7.21□□□□□ -1.25
CTDSPL2-204ENST00000558966 NUCB1Q02818 461 aa7.21□□□□□ -1.25
CTDSPL2-204ENST00000558966 ABCB5Q2M3G0 1257 aa7.21□□□□□ -1.25
CTDSPL2-204ENST00000558966 TJAP1Q5JTD0 557 aa7.21□□□□□ -1.25
CTDSPL2-204ENST00000558966 ZMYM1Q5SVZ6 1142 aa7.21□□□□□ -1.25
CTDSPL2-204ENST00000558966 CTR9Q6PD62 1173 aa7.21□□□□□ -1.25
CTDSPL2-204ENST00000558966 CHD1LQ86WJ1 897 aa7.21□□□□□ -1.25
CTDSPL2-204ENST00000558966 PTPN22Q9Y2R2 807 aa7.21□□□□□ -1.25
CTDSPL2-204ENST00000558966 GREB1LQ9C091 1923 aaPredicted RBP7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 DOCK3Q8IZD9 2030 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 USP17L10C9JJH3 530 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 SEPT2Q15019 361 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 RAB3GAP1Q15042 981 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 GIMAP6Q6P9H5 292 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 NYAP1Q6ZVC0 841 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 C16orf86Q6ZW13 317 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 PLEKHM2Q8IWE5 1019 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 ARMC2Q8NEN0 867 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 ACER1Q8TDN7 264 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 ASCC2Q9H1I8 757 aaPredicted RBP7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 SWAP70Q9UH65 585 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 ROBO3Q96MS0 1386 aa7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 TNRC18O15417 2968 aaPredicted RBP7.21□□□□□ -1.26
CTDSPL2-204ENST00000558966 C19orf81C9J6K1 198 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 FOXP2O15409 715 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 AKR1B1P15121 316 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 CDK8P49336 464 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 PTK2Q05397 1052 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 ZYXQ15942 572 aaKnown RBP7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 LRRFIP1Q32MZ4 808 aaKnown RBP7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 SBK1Q52WX2 424 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 PDXDC2PQ6P474 469 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 CCDC129Q6ZRS4 1044 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 CLEC10AQ8IUN9 316 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 NKX2-3Q8TAU0 364 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 SMCR8Q8TEV9 937 aaPredicted RBP7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 EVI5LQ96CN4 794 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 TRIM47Q96LD4 638 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 C12orf42Q96LP6 360 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 SLC6A16Q9GZN6 736 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 UNC93B1Q9H1C4 597 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 OSBPL3Q9H4L5 887 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 CABP5Q9NP86 173 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 TMOD4Q9NZQ9 345 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 ARPP21Q9UBL0 812 aaPredicted RBP7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 PCDHB9Q9Y5E1 797 aa7.2□□□□□ -1.26
CTDSPL2-204ENST00000558966 PTCH2Q9Y6C5 1203 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms