RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 NT5DC4Q86YG4 428 aa4.68□□□□□ -1.66
LRRC28-212ENST00000558911 TMEM87AQ8NBN3 555 aa4.68□□□□□ -1.66
LRRC28-212ENST00000558911 UBE2Q2Q8WVN8 375 aa4.68□□□□□ -1.66
LRRC28-212ENST00000558911 DACT3Q96B18 629 aaPredicted RBP4.68□□□□□ -1.66
LRRC28-212ENST00000558911 SHISA4Q96DD7 197 aa4.68□□□□□ -1.66
LRRC28-212ENST00000558911 GPATCH3Q96I76 525 aa4.68□□□□□ -1.66
LRRC28-212ENST00000558911 CAPN10Q9HC96 672 aa4.68□□□□□ -1.66
LRRC28-212ENST00000558911 SSU72P8A0A1W2PR75 194 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 SLC22A31A6NKX4 558 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 ADRB1P08588 477 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 VIPR1P32241 457 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 C1QTNF8P60827 252 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 EGFLAMQ63HQ2 1017 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 SDE2Q6IQ49 451 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 CNKSR3Q6P9H4 555 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 CEP128Q6ZU80 1094 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 METTL16Q86W50 562 aaKnown RBP4.67□□□□□ -1.66
LRRC28-212ENST00000558911 SLC43A3Q8NBI5 491 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 PMFBP1Q8TBY8 1022 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 ANKRD24Q8TF21 1146 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 CYB5D2Q8WUJ1 264 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 TINF2Q9BSI4 451 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 BDH2Q9BUT1 245 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 PIF1Q9H611 641 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 KLHL3Q9UH77 587 aa4.67□□□□□ -1.66
LRRC28-212ENST00000558911 LOC102724159A0A0B4J2E5 919 aa4.66□□□□□ -1.66
LRRC28-212ENST00000558911 N4BP3O15049 544 aa4.66□□□□□ -1.66
LRRC28-212ENST00000558911 FKTNO75072 461 aa4.66□□□□□ -1.66
LRRC28-212ENST00000558911 EFEMP2O95967 443 aa4.66□□□□□ -1.66
LRRC28-212ENST00000558911 P4HBP07237 508 aaKnown RBP4.66□□□□□ -1.66
LRRC28-212ENST00000558911 INSRRP14616 1297 aa4.66□□□□□ -1.66
LRRC28-212ENST00000558911 LIG3P49916 1009 aa4.66□□□□□ -1.66
LRRC28-212ENST00000558911 FMR1Q06787 632 aaKnown RBP eCLIP4.66□□□□□ -1.66
LRRC28-212ENST00000558911 PWP2Q15269 919 aaKnown RBP4.66□□□□□ -1.66
LRRC28-212ENST00000558911 NLRX1Q86UT6 975 aa4.66□□□□□ -1.66
LRRC28-212ENST00000558911 FAM161BQ96MY7 647 aa4.66□□□□□ -1.66
LRRC28-212ENST00000558911 ASCC2Q9H1I8 757 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-212ENST00000558911 CNTD2Q9H8S5 307 aa4.66□□□□□ -1.66
LRRC28-212ENST00000558911 EPB41L4AQ9HCS5 686 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-212ENST00000558911 TACC3Q9Y6A5 838 aa4.66□□□□□ -1.66
LRRC28-212ENST00000558911 F6X3S4 739 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 TFE3P19532 575 aaPredicted RBP4.65□□□□□ -1.67
LRRC28-212ENST00000558911 EIF4BP23588 611 aaKnown RBP4.65□□□□□ -1.67
LRRC28-212ENST00000558911 CDR1P51861 262 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 YARSP54577 528 aaKnown RBP4.65□□□□□ -1.67
LRRC28-212ENST00000558911 RPS26P62854 115 aaKnown RBP4.65□□□□□ -1.67
LRRC28-212ENST00000558911 IGBP1P78318 339 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 RPL6Q02878 288 aaKnown RBP4.65□□□□□ -1.67
LRRC28-212ENST00000558911 PUM1Q14671 1186 aaKnown RBP eCLIP4.65□□□□□ -1.67
LRRC28-212ENST00000558911 ZXDCQ2QGD7 858 aaPredicted RBP4.65□□□□□ -1.67
LRRC28-212ENST00000558911 AGMOQ6ZNB7 445 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 SP8Q8IXZ3 490 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 RNF141Q8WVD5 230 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 LINC01599Q8WXQ3 324 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 BORCS6Q96GS4 357 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 KREMEN1Q96MU8 473 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 FOXP3Q9BZS1 431 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 ACBD3Q9H3P7 528 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 ZSWIM4Q9H7M6 989 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 CCSER2Q9H7U1 834 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 ADAM30Q9UKF2 790 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 TLR6Q9Y2C9 796 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 SUGT1Q9Y2Z0 365 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 RIPOR2Q9Y4F9 1068 aa4.65□□□□□ -1.67
LRRC28-212ENST00000558911 NOTOA8MTQ0 251 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 LDHBP07195 334 aaKnown RBP4.64□□□□□ -1.67
LRRC28-212ENST00000558911 DNAJA1P31689 397 aaKnown RBP4.64□□□□□ -1.67
LRRC28-212ENST00000558911 NCKAP1LP55160 1127 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 XPCQ01831 940 aaPredicted RBP4.64□□□□□ -1.67
LRRC28-212ENST00000558911 KIR3DS1Q14943 382 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 PTPROQ16827 1216 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 ZPBP2Q6X784 338 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 PHACTR4Q8IZ21 702 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 RNF34Q969K3 372 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 PWWP2AQ96N64 755 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 G6PC3Q9BUM1 346 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 TGIF2Q9GZN2 237 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 RNF19AQ9NV58 838 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 SLC52A1Q9NWF4 448 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 TBX22Q9Y458 520 aa4.64□□□□□ -1.67
LRRC28-212ENST00000558911 SETBP1Q9Y6X0 1596 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 hCG_2014768A0A024R1R8 64 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 PLEKHD1A6NEE1 506 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 CHURC1-FNTBB4DL54 471 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 BPNT1O95861 308 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 RBL2Q08999 1139 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 TCEAL1Q15170 157 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 TMC6Q7Z403 805 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 FAM129CQ86XR2 697 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 TMEFF1Q8IYR6 380 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 MZB1Q8WU39 189 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 PLCD4Q9BRC7 762 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 PARP2Q9UGN5 583 aa4.63□□□□□ -1.67
LRRC28-212ENST00000558911 NUDT19A8MXV4 375 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 TPD52L2O43399 206 aaKnown RBP4.62□□□□□ -1.67
LRRC28-212ENST00000558911 NRDCO43847 1150 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 GBP1P32455 592 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 FANCCQ00597 558 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 NMIQ13287 307 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-212ENST00000558911 RTP5Q14D33 572 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms