RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 ZNF454Q8N9F8 522 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 CEP95Q96GE4 821 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 UNC93B1Q9H1C4 597 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 GOPCQ9HD26 462 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 MORF4L1Q9UBU8 362 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 TACC3Q9Y6A5 838 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 CCDC171Q6TFL3 1326 aa14.25□□□□□ -0.13
TPM1-216ENST00000558910 BRCA2P51587 3418 aa14.25□□□□□ -0.13
TPM1-216ENST00000558910 TSPY2A6NKD2 308 aa14.25□□□□□ -0.13
TPM1-216ENST00000558910 FGAP02671 866 aa14.25□□□□□ -0.13
TPM1-216ENST00000558910 HSPD1P10809 573 aaKnown RBP14.25□□□□□ -0.13
TPM1-216ENST00000558910 GSPT1P15170 499 aaKnown RBP14.25□□□□□ -0.13
TPM1-216ENST00000558910 RGS19P49795 217 aa14.25□□□□□ -0.13
TPM1-216ENST00000558910 COG2Q14746 738 aa14.25□□□□□ -0.13
TPM1-216ENST00000558910 PLEKHH3Q7Z736 793 aa14.25□□□□□ -0.13
TPM1-216ENST00000558910 ZNF287Q9HBT7 754 aa14.25□□□□□ -0.13
TPM1-216ENST00000558910 RABGAP1Q9Y3P9 1069 aa14.25□□□□□ -0.13
TPM1-216ENST00000558910 MGAMO43451 1857 aa14.25□□□□□ -0.13
TPM1-216ENST00000558910 DOCK3Q8IZD9 2030 aa14.24□□□□□ -0.13
TPM1-216ENST00000558910 ARHGAP33O14559 1287 aa14.24□□□□□ -0.13
TPM1-216ENST00000558910 MAPK4P31152 587 aa14.24□□□□□ -0.13
TPM1-216ENST00000558910 CCL14Q16627 93 aa14.24□□□□□ -0.13
TPM1-216ENST00000558910 TTC22Q5TAA0 569 aa14.24□□□□□ -0.13
TPM1-216ENST00000558910 NCAPG2Q86XI2 1143 aa14.24□□□□□ -0.13
TPM1-216ENST00000558910 NUDT12Q9BQG2 462 aa14.24□□□□□ -0.13
TPM1-216ENST00000558910 OSBPL3Q9H4L5 887 aa14.24□□□□□ -0.13
TPM1-216ENST00000558910 STX8Q9UNK0 236 aa14.24□□□□□ -0.13
TPM1-216ENST00000558910 TNRC18O15417 2968 aaPredicted RBP14.24□□□□□ -0.13
TPM1-216ENST00000558910 ROBO3Q96MS0 1386 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 F5H6K3 240 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 DPYSL4O14531 572 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 WDR46O15213 610 aaKnown RBP14.23□□□□□ -0.13
TPM1-216ENST00000558910 NDUFB10O96000 172 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 PSEN2P49810 448 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 CCNA1P78396 465 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 KLRC3Q07444 240 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 IKQ13123 557 aaPredicted RBP14.23□□□□□ -0.13
TPM1-216ENST00000558910 RASGRP2Q7LDG7 609 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 GTF3C2Q8WUA4 911 aaPredicted RBP14.23□□□□□ -0.13
TPM1-216ENST00000558910 LPAR1Q92633 364 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 KIFC2Q96AC6 838 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 MOV10L1Q9BXT6 1211 aaKnown RBP14.23□□□□□ -0.13
TPM1-216ENST00000558910 HOXC10Q9NYD6 342 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 GJD2Q9UKL4 321 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 CTDP1Q9Y5B0 961 aaPredicted RBP14.23□□□□□ -0.13
TPM1-216ENST00000558910 IVNS1ABPQ9Y6Y0 642 aa14.23□□□□□ -0.13
TPM1-216ENST00000558910 FOSBP53539 338 aa14.22□□□□□ -0.13
TPM1-216ENST00000558910 CPXCR1Q8N123 301 aa14.22□□□□□ -0.13
TPM1-216ENST00000558910 DEFB118Q96PH6 123 aa14.22□□□□□ -0.13
TPM1-216ENST00000558910 SPATC1LQ9H0A9 340 aa14.22□□□□□ -0.13
TPM1-216ENST00000558910 MTMR4Q9NYA4 1195 aa14.22□□□□□ -0.13
TPM1-216ENST00000558910 NYAP2Q9P242 653 aa14.22□□□□□ -0.13
TPM1-216ENST00000558910 MKI67P46013 3256 aaKnown RBP14.21□□□□□ -0.13
TPM1-216ENST00000558910 IGKV6D-41A0A0C4DH26 115 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 TTLL1O95922 423 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 TFRCP02786 760 aaKnown RBP14.21□□□□□ -0.13
TPM1-216ENST00000558910 ZKSCAN1P17029 563 aaPredicted RBP14.21□□□□□ -0.13
TPM1-216ENST00000558910 ERCC3P19447 782 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 MFAP1P55081 439 aaKnown RBP14.21□□□□□ -0.13
TPM1-216ENST00000558910 SNAP25P60880 206 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 SLFN13Q68D06 897 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 LBX2Q6XYB7 198 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 TBC1D10CQ8IV04 446 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 NEDD1Q8NHV4 660 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 NKX2-3Q8TAU0 364 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 TRIB2Q92519 343 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 ZKSCAN3Q9BRR0 538 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 IL25Q9H293 177 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 TSHZ2Q9NRE2 1034 aa14.21□□□□□ -0.13
TPM1-216ENST00000558910 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.21□□□□□ -0.13
TPM1-216ENST00000558910 HIP1O00291 1037 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 MCCP23508 829 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 RGS2P41220 211 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 IRF5Q13568 498 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 TMEM132BQ14DG7 1078 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 ALX1Q15699 326 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 CCDC96Q2M329 555 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 DMRTA1Q5VZB9 504 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 KCTD1Q719H9 257 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 DPP9Q86TI2 863 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 SLF1Q9BQI6 1058 aa14.2□□□□□ -0.14
TPM1-216ENST00000558910 TMEM232C9JQI7 657 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 ZNF213O14771 459 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 HMGCRP04035 888 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 PTPREP23469 700 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 MORN1Q5T089 497 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 MFSD6Q6ZSS7 791 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 NPLOC4Q8TAT6 608 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 PXYLP1Q8TE99 480 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 U2AF1L4Q8WU68 220 aaKnown RBP14.19□□□□□ -0.14
TPM1-216ENST00000558910 SOCS4Q8WXH5 440 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 SHISA4Q96DD7 197 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 NBPF3Q9H094 633 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 IL17RBQ9NRM6 502 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 FLRT1Q9NZU1 646 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 PPP1R9AQ9ULJ8 1098 aa14.19□□□□□ -0.14
TPM1-216ENST00000558910 NEDD4P46934 1319 aa14.18□□□□□ -0.14
TPM1-216ENST00000558910 VWA5AO00534 786 aa14.18□□□□□ -0.14
TPM1-216ENST00000558910 BMP3P12645 472 aa14.18□□□□□ -0.14
TPM1-216ENST00000558910 ADORA2AP29274 412 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms