RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 FAM47AQ5JRC9 791 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 GJC2Q5T442 439 aaPredicted RBP6.62□□□□□ -1.35
SMAD3-209ENST00000558894 ANKRD45Q5TZF3 282 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 ANO1Q5XXA6 986 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 MAMDC4Q6UXC1 1216 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 RASGRP2Q7LDG7 609 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 DPP9Q86TI2 863 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 AMOTL1Q8IY63 956 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 DDRGK1Q96HY6 314 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 LRCH3Q96II8 777 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 SLF1Q9BQI6 1058 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 TINF2Q9BSI4 451 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 FSD1Q9BTV5 496 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 KATNBL1Q9H079 304 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 MKNK2Q9HBH9 465 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 SLC38A10Q9HBR0 1119 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 GOPCQ9HD26 462 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 CLIP2Q9UDT6 1046 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 ANAPC4Q9UJX5 808 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 DIS3Q9Y2L1 958 aaKnown RBP6.62□□□□□ -1.35
SMAD3-209ENST00000558894 MUC3AQ02505 3323 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 MYH6P13533 1939 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 GBF1Q92538 1859 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 ASTN1O14525 1302 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 A0A0D9SFI3 127 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 NMT2O60551 498 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 MSCO60682 206 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 ADAMTS4O75173 837 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 TTLL1O95922 423 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 APPP05067 770 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 CNGA1P29973 690 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 TDO2P48775 406 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 TFAP4Q01664 338 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 CTDSPL2Q05D32 466 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 ALX1Q15699 326 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 C1orf53Q5VUE5 145 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 CCSAPQ6IQ19 270 aaPredicted RBP6.61□□□□□ -1.35
SMAD3-209ENST00000558894 SLC39A5Q6ZMH5 540 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 ZNF444Q8N0Y2 327 aaPredicted RBP6.61□□□□□ -1.35
SMAD3-209ENST00000558894 LRRC47Q8N1G4 583 aaKnown RBP6.61□□□□□ -1.35
SMAD3-209ENST00000558894 PRPF38AQ8NAV1 312 aaKnown RBP6.61□□□□□ -1.35
SMAD3-209ENST00000558894 EVI5LQ96CN4 794 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 FAM227BQ96M60 508 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 MMP19Q99542 508 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 TEX13BQ9BXU2 312 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 SENP6Q9GZR1 1112 aaPredicted RBP6.61□□□□□ -1.35
SMAD3-209ENST00000558894 HELLSQ9NRZ9 838 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 NRBP1Q9UHY1 535 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 EYSQ5T1H1 3165 aa6.61□□□□□ -1.35
SMAD3-209ENST00000558894 KIAA1217Q5T5P2 1943 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 ZMYM6O95789 1325 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 CTAGE5O15320 804 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 ORC4O43929 436 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 FGAP02671 866 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 BMP3P12645 472 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 ITGB8P26012 769 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 OAZ1P54368 228 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 IRX5P78411 483 aaPredicted RBP6.6□□□□□ -1.35
SMAD3-209ENST00000558894 KCTD2Q14681 263 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 LRRC41Q15345 812 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 LRIT3Q3SXY7 679 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 SLFN13Q68D06 897 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 SNRNP48Q6IEG0 339 aaKnown RBP6.6□□□□□ -1.35
SMAD3-209ENST00000558894 RCSD1Q6JBY9 416 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 SAMD1Q6SPF0 538 aaPredicted RBP6.6□□□□□ -1.35
SMAD3-209ENST00000558894 ZNF589Q86UQ0 364 aaPredicted RBP6.6□□□□□ -1.35
SMAD3-209ENST00000558894 TICAM2Q86XR7 235 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 PLEKHM2Q8IWE5 1019 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 LENG1Q96BZ8 264 aaPredicted RBP6.6□□□□□ -1.35
SMAD3-209ENST00000558894 GMCL1Q96IK5 515 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 NAPBQ9H115 298 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 OSBPL3Q9H4L5 887 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 CWC22Q9HCG8 908 aaKnown RBP6.6□□□□□ -1.35
SMAD3-209ENST00000558894 RAVER2Q9HCJ3 691 aaKnown RBP6.6□□□□□ -1.35
SMAD3-209ENST00000558894 FEM1BQ9UK73 627 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 PHF24Q9UPV7 400 aa6.6□□□□□ -1.35
SMAD3-209ENST00000558894 SYNGAP1Q96PV0 1343 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 TRIM43BA6NCK2 446 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 MYADML2A6NDP7 307 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 SOWAHBA6NEL2 793 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 TMEM232C9JQI7 657 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 PLA2G6O60733 806 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 MYCNP04198 464 aaPredicted RBP6.59□□□□□ -1.35
SMAD3-209ENST00000558894 TSPY3P0CV98 308 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 TSPY8P0CW00 308 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 HSPD1P10809 573 aaKnown RBP6.59□□□□□ -1.35
SMAD3-209ENST00000558894 MCCP23508 829 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 COPB2P35606 906 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 ADCYAP1R1P41586 468 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 ATN1P54259 1190 aaPredicted RBP6.59□□□□□ -1.35
SMAD3-209ENST00000558894 RTP1P59025 263 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 NKX3-2P78367 333 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 NUCB1Q02818 461 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 PDE4BQ07343 736 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 NMIQ13287 307 aaPredicted RBP6.59□□□□□ -1.35
SMAD3-209ENST00000558894 AAMPQ13685 434 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 LRRFIP1Q32MZ4 808 aaKnown RBP6.59□□□□□ -1.35
SMAD3-209ENST00000558894 MCMDC2Q4G0Z9 681 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 GPR153Q6NV75 609 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms