RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 MTMR4Q9NYA4 1195 aa13.74□□□□□ -0.21
CASC4-205ENST00000558735 FOXP2O15409 715 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 SEPT4O43236 478 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 NDUFB10O96000 172 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 PGK2P07205 417 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 ZNF792Q3KQV3 632 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 PRPF38AQ8NAV1 312 aaKnown RBP13.73□□□□□ -0.21
CASC4-205ENST00000558735 NEDD1Q8NHV4 660 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 CEP95Q96GE4 821 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 MMP19Q99542 508 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 SLF1Q9BQI6 1058 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 ZNF287Q9HBT7 754 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 PDLIM7Q9NR12 457 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 ATP11BQ9Y2G3 1177 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 RIPK3Q9Y572 518 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 ZNF236Q9UL36 1845 aa13.73□□□□□ -0.21
CASC4-205ENST00000558735 KBTBD13C9JR72 458 aa13.72□□□□□ -0.21
CASC4-205ENST00000558735 PDE1AP54750 535 aa13.72□□□□□ -0.21
CASC4-205ENST00000558735 TFAP4Q01664 338 aa13.72□□□□□ -0.21
CASC4-205ENST00000558735 PPARAQ07869 468 aa13.72□□□□□ -0.21
CASC4-205ENST00000558735 HDAC1Q13547 482 aaPredicted RBP13.72□□□□□ -0.21
CASC4-205ENST00000558735 FAM47AQ5JRC9 791 aa13.72□□□□□ -0.21
CASC4-205ENST00000558735 GJC2Q5T442 439 aaPredicted RBP13.72□□□□□ -0.21
CASC4-205ENST00000558735 CCDC129Q6ZRS4 1044 aa13.72□□□□□ -0.21
CASC4-205ENST00000558735 MYLIPQ8WY64 445 aa13.72□□□□□ -0.21
CASC4-205ENST00000558735 BADQ92934 168 aa13.72□□□□□ -0.21
CASC4-205ENST00000558735 DIS3Q9Y2L1 958 aaKnown RBP13.72□□□□□ -0.21
CASC4-205ENST00000558735 MYH8P13535 1937 aa13.72□□□□□ -0.21
CASC4-205ENST00000558735 TRIM43BA6NCK2 446 aa13.71□□□□□ -0.21
CASC4-205ENST00000558735 TTLL1O95922 423 aa13.71□□□□□ -0.21
CASC4-205ENST00000558735 TAL1P17542 331 aaPredicted RBP13.71□□□□□ -0.21
CASC4-205ENST00000558735 PDE4BQ07343 736 aa13.71□□□□□ -0.21
CASC4-205ENST00000558735 KCTD2Q14681 263 aa13.71□□□□□ -0.21
CASC4-205ENST00000558735 TRIM43Q96BQ3 446 aaPredicted RBP13.71□□□□□ -0.21
CASC4-205ENST00000558735 TINF2Q9BSI4 451 aa13.71□□□□□ -0.21
CASC4-205ENST00000558735 NAPBQ9H115 298 aa13.71□□□□□ -0.21
CASC4-205ENST00000558735 TACC3Q9Y6A5 838 aa13.71□□□□□ -0.21
CASC4-205ENST00000558735 CHD9Q3L8U1 2897 aa13.71□□□□□ -0.22
CASC4-205ENST00000558735 ZNFX1Q9P2E3 1918 aaKnown RBP13.7□□□□□ -0.22
CASC4-205ENST00000558735 A0A0G2JMZ2 1700 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 ATP2A1O14983 1001 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 TRIM60Q495X7 471 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 VPS53Q5VIR6 699 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 CPXCR1Q8N123 301 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 GMCL1P1Q8NEA9 526 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 EVI5LQ96CN4 794 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 TEX13BQ9BXU2 312 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
CASC4-205ENST00000558735 NRBP1Q9UHY1 535 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 SYNPO2Q9UMS6 1093 aa13.7□□□□□ -0.22
CASC4-205ENST00000558735 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
CASC4-205ENST00000558735 DNAJC25-GNG10A0A024R161 153 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 ZBED4O75132 1171 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 SLC3A2P08195 630 aaKnown RBP13.69□□□□□ -0.22
CASC4-205ENST00000558735 ZNF865P0CJ78 1059 aaPredicted RBP13.69□□□□□ -0.22
CASC4-205ENST00000558735 FOSL2P15408 326 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 COPB2P35606 906 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 ADCYAP1R1P41586 468 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 CTDSPL2Q05D32 466 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 LRRC41Q15345 812 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 SLFN13Q68D06 897 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 SNRNP48Q6IEG0 339 aaKnown RBP13.69□□□□□ -0.22
CASC4-205ENST00000558735 SH3RF1Q7Z6J0 888 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
CASC4-205ENST00000558735 KIFC2Q96AC6 838 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 SLC38A10Q9HBR0 1119 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 RAVER2Q9HCJ3 691 aaKnown RBP13.69□□□□□ -0.22
CASC4-205ENST00000558735 IL17RBQ9NRM6 502 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 FEM1BQ9UK73 627 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 PHF24Q9UPV7 400 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
CASC4-205ENST00000558735 SMCHD1A6NHR9 2005 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 PARP14Q460N5 1801 aa13.69□□□□□ -0.22
CASC4-205ENST00000558735 KIAA0355O15063 1070 aa13.68□□□□□ -0.22
CASC4-205ENST00000558735 BMP3P12645 472 aa13.68□□□□□ -0.22
CASC4-205ENST00000558735 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
CASC4-205ENST00000558735 TLE2Q04725 743 aa13.68□□□□□ -0.22
CASC4-205ENST00000558735 ALX1Q15699 326 aa13.68□□□□□ -0.22
CASC4-205ENST00000558735 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
CASC4-205ENST00000558735 PRDM5Q9NQX1 630 aaPredicted RBP13.68□□□□□ -0.22
CASC4-205ENST00000558735 HELLSQ9NRZ9 838 aa13.68□□□□□ -0.22
CASC4-205ENST00000558735 ANAPC4Q9UJX5 808 aa13.68□□□□□ -0.22
CASC4-205ENST00000558735 COL11A1P12107 1806 aaPredicted RBP13.67□□□□□ -0.22
CASC4-205ENST00000558735 TMEM232C9JQI7 657 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 NMT2O60551 498 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 SNAI1O95863 264 aaPredicted RBP13.67□□□□□ -0.22
CASC4-205ENST00000558735 FGAP02671 866 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
CASC4-205ENST00000558735 FGRP09769 529 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 MCCP23508 829 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 TJAP1Q5JTD0 557 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 MAMDC4Q6UXC1 1216 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
CASC4-205ENST00000558735 SMC5Q8IY18 1101 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 FERMT2Q96AC1 680 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 CHMP4CQ96CF2 233 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms