RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 THSD7BQ9C0I4 1608 aa8.03□□□□□ -1.12
ZEB1-211ENST00000558440 WDR33Q9C0J8 1336 aaKnown RBP8.03□□□□□ -1.12
ZEB1-211ENST00000558440 COL3A1P02461 1466 aaPredicted RBP8.02□□□□□ -1.13
ZEB1-211ENST00000558440 ICMTO60725 284 aa8.02□□□□□ -1.13
ZEB1-211ENST00000558440 ALDH1B1P30837 517 aa8.02□□□□□ -1.13
ZEB1-211ENST00000558440 IARSP41252 1262 aaKnown RBP8.02□□□□□ -1.13
ZEB1-211ENST00000558440 PIP4K2AP48426 406 aaPredicted RBP8.02□□□□□ -1.13
ZEB1-211ENST00000558440 CC2D1BQ5T0F9 858 aaKnown RBP8.02□□□□□ -1.13
ZEB1-211ENST00000558440 GPC2Q8N158 579 aa8.02□□□□□ -1.13
ZEB1-211ENST00000558440 UBASH3BQ8TF42 649 aa8.02□□□□□ -1.13
ZEB1-211ENST00000558440 JDP2Q8WYK2 163 aa8.02□□□□□ -1.13
ZEB1-211ENST00000558440 NXPE3Q969Y0 559 aa8.02□□□□□ -1.13
ZEB1-211ENST00000558440 PCGF6Q9BYE7 350 aa8.02□□□□□ -1.13
ZEB1-211ENST00000558440 NIP7Q9Y221 180 aaKnown RBP eCLIP8.02□□□□□ -1.13
ZEB1-211ENST00000558440 DLG5Q8TDM6 1919 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 LTBP1Q14766 1721 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 CEMIPQ8WUJ3 1361 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 KLRG2A4D1S0 409 aaPredicted RBP8.01□□□□□ -1.13
ZEB1-211ENST00000558440 FZD9O00144 591 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 KCNQ3O43525 872 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 FSTP19883 344 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 ECE1P42892 770 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 EIF6P56537 245 aaKnown RBP8.01□□□□□ -1.13
ZEB1-211ENST00000558440 UVSSAQ2YD98 709 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 OLFM4Q6UX06 510 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 SLC51AQ86UW1 340 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 SYNE4Q8N205 404 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 BSNDQ8WZ55 320 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 KRTAP9-9Q9BYP9 154 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 KRTAP9-4Q9BYQ2 154 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 RNF112Q9ULX5 631 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 RAXQ9Y2V3 346 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 USP16Q9Y5T5 823 aa8.01□□□□□ -1.13
ZEB1-211ENST00000558440 CCDC85CA6NKD9 419 aa8□□□□□ -1.13
ZEB1-211ENST00000558440 SNRPA1P09661 255 aaKnown RBP8□□□□□ -1.13
ZEB1-211ENST00000558440 SERPINB4P48594 390 aa8□□□□□ -1.13
ZEB1-211ENST00000558440 GRM1Q13255 1194 aa8□□□□□ -1.13
ZEB1-211ENST00000558440 ARMC10Q8N2F6 343 aa8□□□□□ -1.13
ZEB1-211ENST00000558440 RTF1Q92541 710 aaKnown RBP8□□□□□ -1.13
ZEB1-211ENST00000558440 FAM46AQ96IP4 442 aaKnown RBP8□□□□□ -1.13
ZEB1-211ENST00000558440 CAPNS2Q96L46 248 aa8□□□□□ -1.13
ZEB1-211ENST00000558440 PSMD1Q99460 953 aa8□□□□□ -1.13
ZEB1-211ENST00000558440 BHLHE41Q9C0J9 482 aaPredicted RBP8□□□□□ -1.13
ZEB1-211ENST00000558440 ZFYVE28Q9HCC9 887 aa8□□□□□ -1.13
ZEB1-211ENST00000558440 DDX21Q9NR30 783 aaKnown RBP eCLIP8□□□□□ -1.13
ZEB1-211ENST00000558440 POLR2AP24928 1970 aaKnown RBP8□□□□□ -1.13
ZEB1-211ENST00000558440 KIF7Q2M1P5 1343 aa8□□□□□ -1.13
ZEB1-211ENST00000558440 AKAP11Q9UKA4 1901 aa7.99□□□□□ -1.13
ZEB1-211ENST00000558440 PRAMEF22A3QJZ6 481 aa7.99□□□□□ -1.13
ZEB1-211ENST00000558440 H3BRB1 525 aa7.99□□□□□ -1.13
ZEB1-211ENST00000558440 C19orf57Q0VDD7 668 aa7.99□□□□□ -1.13
ZEB1-211ENST00000558440 CNGB1Q14028 1251 aaPredicted RBP7.99□□□□□ -1.13
ZEB1-211ENST00000558440 PEAR1Q5VY43 1037 aaPredicted RBP7.99□□□□□ -1.13
ZEB1-211ENST00000558440 VN1R5Q7Z5H4 357 aa7.99□□□□□ -1.13
ZEB1-211ENST00000558440 SLC7A3Q8WY07 619 aa7.99□□□□□ -1.13
ZEB1-211ENST00000558440 NYXQ9GZU5 481 aa7.99□□□□□ -1.13
ZEB1-211ENST00000558440 TUT1Q9H6E5 874 aaKnown RBP7.99□□□□□ -1.13
ZEB1-211ENST00000558440 LATS2Q9NRM7 1088 aa7.99□□□□□ -1.13
ZEB1-211ENST00000558440 KDM3BQ7LBC6 1761 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 DHX15O43143 795 aaKnown RBP7.98□□□□□ -1.13
ZEB1-211ENST00000558440 PRKAR2BP31323 418 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 ARL4DP49703 201 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 NLRP12P59046 1061 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 ECM1Q16610 540 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 CYP4F22Q6NT55 531 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 ERICH6Q7L0X2 663 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 GLYCTKQ8IVS8 523 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 RPGRQ92834 1020 aaKnown RBP7.98□□□□□ -1.13
ZEB1-211ENST00000558440 UTP4Q969X6 686 aaKnown RBP7.98□□□□□ -1.13
ZEB1-211ENST00000558440 PHACTR3Q96KR7 559 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 CFAP53Q96M91 514 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 GPR101Q96P66 508 aaPredicted RBP7.98□□□□□ -1.13
ZEB1-211ENST00000558440 COL4A5P29400 1685 aa7.98□□□□□ -1.13
ZEB1-211ENST00000558440 LAMB2P55268 1798 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 SNED1Q8TER0 1413 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 HYAL3O43820 417 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-211ENST00000558440 EPS15P42566 896 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 IKBKEQ14164 716 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 HLFQ16534 295 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 CRY2Q49AN0 593 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 HGSNATQ68CP4 663 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 USP50Q70EL3 339 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-211ENST00000558440 MCM10Q7L590 875 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 NIM1KQ8IY84 436 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 MYRFLQ96LU7 910 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 ARID3AQ99856 593 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 RNF208Q9H0X6 261 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 TMX4Q9H1E5 349 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-211ENST00000558440 STOML1Q9UBI4 398 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 BRPF3Q9ULD4 1205 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 NUDCQ9Y266 331 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 ANKRD36CQ5JPF3 1778 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 ABCC12Q96J65 1359 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 NPC1L1Q9UHC9 1359 aa7.97□□□□□ -1.13
ZEB1-211ENST00000558440 TRAF5O00463 557 aa7.96□□□□□ -1.14
ZEB1-211ENST00000558440 SOX1O00570 391 aaPredicted RBP7.96□□□□□ -1.14
ZEB1-211ENST00000558440 GSC2O15499 205 aa7.96□□□□□ -1.14
ZEB1-211ENST00000558440 CA12O43570 354 aa7.96□□□□□ -1.14
ZEB1-211ENST00000558440 MAP2K2P36507 400 aa7.96□□□□□ -1.14
ZEB1-211ENST00000558440 FMR1Q06787 632 aaKnown RBP eCLIP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms