RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 TDHQ8IZJ6 230 aa18.48■□□□□ 0.55
TPM1-211ENST00000558314 PRPF38AQ8NAV1 312 aaKnown RBP18.48■□□□□ 0.55
TPM1-211ENST00000558314 REPS2Q8NFH8 660 aa18.48■□□□□ 0.55
TPM1-211ENST00000558314 TINF2Q9BSI4 451 aa18.48■□□□□ 0.55
TPM1-211ENST00000558314 XPNPEP3Q9NQH7 507 aa18.48■□□□□ 0.55
TPM1-211ENST00000558314 MTMR4Q9NYA4 1195 aa18.48■□□□□ 0.55
TPM1-211ENST00000558314 CNPY2Q9Y2B0 182 aa18.48■□□□□ 0.55
TPM1-211ENST00000558314 IGKV6D-41A0A0C4DH26 115 aa18.47■□□□□ 0.55
TPM1-211ENST00000558314 PGK1P00558 417 aa18.47■□□□□ 0.55
TPM1-211ENST00000558314 IGHA2P01877 340 aa18.47■□□□□ 0.55
TPM1-211ENST00000558314 RARBP10826 455 aa18.47■□□□□ 0.55
TPM1-211ENST00000558314 LRRC41Q15345 812 aa18.47■□□□□ 0.55
TPM1-211ENST00000558314 ZNF792Q3KQV3 632 aa18.47■□□□□ 0.55
TPM1-211ENST00000558314 LENG1Q96BZ8 264 aaPredicted RBP18.47■□□□□ 0.55
TPM1-211ENST00000558314 INCENPQ9NQS7 918 aa18.47■□□□□ 0.55
TPM1-211ENST00000558314 TOMM22Q9NS69 142 aa18.47■□□□□ 0.55
TPM1-211ENST00000558314 HOMER2Q9NSB8 354 aa18.47■□□□□ 0.55
TPM1-211ENST00000558314 RIPK3Q9Y572 518 aa18.47■□□□□ 0.55
TPM1-211ENST00000558314 PARP14Q460N5 1801 aa18.46■□□□□ 0.55
TPM1-211ENST00000558314 TSPY2A6NKD2 308 aa18.46■□□□□ 0.55
TPM1-211ENST00000558314 TRIM60Q495X7 471 aa18.46■□□□□ 0.55
TPM1-211ENST00000558314 SLC39A5Q6ZMH5 540 aa18.46■□□□□ 0.55
TPM1-211ENST00000558314 ANKRD35Q8N283 1001 aa18.46■□□□□ 0.55
TPM1-211ENST00000558314 NEDD1Q8NHV4 660 aa18.46■□□□□ 0.55
TPM1-211ENST00000558314 FEM1BQ9UK73 627 aa18.46■□□□□ 0.55
TPM1-211ENST00000558314 ZHX1Q9UKY1 873 aaPredicted RBP18.46■□□□□ 0.55
TPM1-211ENST00000558314 STX8Q9UNK0 236 aa18.46■□□□□ 0.55
TPM1-211ENST00000558314 TMEM232C9JQI7 657 aa18.45■□□□□ 0.54
TPM1-211ENST00000558314 BMP3P12645 472 aa18.45■□□□□ 0.54
TPM1-211ENST00000558314 Q7L0L9 218 aa18.45■□□□□ 0.54
TPM1-211ENST00000558314 GREB1LQ9C091 1923 aaPredicted RBP18.45■□□□□ 0.54
TPM1-211ENST00000558314 SZT2Q5T011 3432 aa18.44■□□□□ 0.54
TPM1-211ENST00000558314 RANBP6O60518 1105 aaKnown RBP18.44■□□□□ 0.54
TPM1-211ENST00000558314 MCCP23508 829 aa18.44■□□□□ 0.54
TPM1-211ENST00000558314 RRP12Q5JTH9 1297 aaKnown RBP18.44■□□□□ 0.54
TPM1-211ENST00000558314 VPS53Q5VIR6 699 aa18.44■□□□□ 0.54
TPM1-211ENST00000558314 B4GALNT3Q6L9W6 998 aa18.44■□□□□ 0.54
TPM1-211ENST00000558314 RNF180Q86T96 592 aa18.44■□□□□ 0.54
TPM1-211ENST00000558314 MKL1Q969V6 931 aa18.44■□□□□ 0.54
TPM1-211ENST00000558314 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
TPM1-211ENST00000558314 DIS3Q9Y2L1 958 aaKnown RBP18.44■□□□□ 0.54
TPM1-211ENST00000558314 ZNFX1Q9P2E3 1918 aaKnown RBP18.44■□□□□ 0.54
TPM1-211ENST00000558314 MYH4Q9Y623 1939 aa18.43■□□□□ 0.54
TPM1-211ENST00000558314 TRIM6-TRIM34B2RNG4 842 aa18.43■□□□□ 0.54
TPM1-211ENST00000558314 NMT2O60551 498 aa18.43■□□□□ 0.54
TPM1-211ENST00000558314 AKR1A1P14550 325 aa18.43■□□□□ 0.54
TPM1-211ENST00000558314 SLC1A4P43007 532 aa18.43■□□□□ 0.54
TPM1-211ENST00000558314 SNAP25P60880 206 aa18.43■□□□□ 0.54
TPM1-211ENST00000558314 DEFB123Q8N688 67 aa18.43■□□□□ 0.54
TPM1-211ENST00000558314 GMCL1P1Q8NEA9 526 aa18.43■□□□□ 0.54
TPM1-211ENST00000558314 LNPKQ9C0E8 428 aa18.43■□□□□ 0.54
TPM1-211ENST00000558314 SLC38A10Q9HBR0 1119 aa18.43■□□□□ 0.54
TPM1-211ENST00000558314 PDE1AP54750 535 aa18.42■□□□□ 0.54
TPM1-211ENST00000558314 CCDC174Q6PII3 467 aa18.42■□□□□ 0.54
TPM1-211ENST00000558314 KCTD1Q719H9 257 aa18.42■□□□□ 0.54
TPM1-211ENST00000558314 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
TPM1-211ENST00000558314 FAM227BQ96M60 508 aa18.42■□□□□ 0.54
TPM1-211ENST00000558314 NRBP1Q9UHY1 535 aa18.42■□□□□ 0.54
TPM1-211ENST00000558314 ZNF865P0CJ78 1059 aaPredicted RBP18.41■□□□□ 0.54
TPM1-211ENST00000558314 STAT2P52630 851 aa18.41■□□□□ 0.54
TPM1-211ENST00000558314 CCDC96Q2M329 555 aa18.41■□□□□ 0.54
TPM1-211ENST00000558314 LRIT3Q3SXY7 679 aa18.41■□□□□ 0.54
TPM1-211ENST00000558314 RASGRP2Q7LDG7 609 aa18.41■□□□□ 0.54
TPM1-211ENST00000558314 FAM184BQ9ULE4 1060 aa18.41■□□□□ 0.54
TPM1-211ENST00000558314 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
TPM1-211ENST00000558314 PLIN4Q96Q06 1357 aa18.41■□□□□ 0.54
TPM1-211ENST00000558314 PLXNA1Q9UIW2 1896 aa18.4■□□□□ 0.54
TPM1-211ENST00000558314 FOXP2O15409 715 aa18.4■□□□□ 0.54
TPM1-211ENST00000558314 PQBP1O60828 265 aaKnown RBP18.4■□□□□ 0.54
TPM1-211ENST00000558314 TLE2Q04725 743 aa18.4■□□□□ 0.54
TPM1-211ENST00000558314 HDAC1Q13547 482 aaPredicted RBP18.4■□□□□ 0.54
TPM1-211ENST00000558314 SH3RF1Q7Z6J0 888 aa18.4■□□□□ 0.54
TPM1-211ENST00000558314 CHST13Q8NET6 341 aa18.4■□□□□ 0.54
TPM1-211ENST00000558314 CHURC1Q8WUH1 139 aa18.4■□□□□ 0.54
TPM1-211ENST00000558314 BADQ92934 168 aa18.4■□□□□ 0.54
TPM1-211ENST00000558314 AGBL1Q96MI9 1066 aa18.4■□□□□ 0.54
TPM1-211ENST00000558314 FBXO40Q9UH90 709 aa18.4■□□□□ 0.54
TPM1-211ENST00000558314 PHF24Q9UPV7 400 aa18.4■□□□□ 0.54
TPM1-211ENST00000558314 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
TPM1-211ENST00000558314 SMCHD1A6NHR9 2005 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 A0A0D9SFI3 127 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 ATP2A1O14983 1001 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 SNAI1O95863 264 aaPredicted RBP18.39■□□□□ 0.53
TPM1-211ENST00000558314 ALAS1P13196 640 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 HAND2P61296 217 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 NMIQ13287 307 aaPredicted RBP18.39■□□□□ 0.53
TPM1-211ENST00000558314 PPP4R3BQ5MIZ7 849 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 NOL8Q76FK4 1167 aaKnown RBP18.39■□□□□ 0.53
TPM1-211ENST00000558314 FAM160B2Q86V87 743 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 STAG1Q8WVM7 1258 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 VTI1AQ96AJ9 217 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 ACAD9Q9H845 621 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 HELLSQ9NRZ9 838 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 RNF146Q9NTX7 359 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.39■□□□□ 0.53
TPM1-211ENST00000558314 TACC3Q9Y6A5 838 aa18.39■□□□□ 0.53
TPM1-211ENST00000558314 A0A1W2PQ45 241 aaPredicted RBP18.38■□□□□ 0.53
TPM1-211ENST00000558314 A0A1W2PQY0 241 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 POTEB2H3BUK9 544 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 CNTN2Q02246 1040 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms