RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 EHMT1Q9H9B1 1298 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 FHOD3Q2V2M9 1422 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 ARHGEF12Q9NZN5 1544 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 RGS13O14921 159 aa5.63□□□□□ -1.51
LRRC28-205ENST00000558248 TOM1O60784 492 aa5.63□□□□□ -1.51
LRRC28-205ENST00000558248 IMPDH2P12268 514 aa5.63□□□□□ -1.51
LRRC28-205ENST00000558248 RAD51AP2Q09MP3 1159 aa5.63□□□□□ -1.51
LRRC28-205ENST00000558248 CLEC16AQ2KHT3 1053 aa5.63□□□□□ -1.51
LRRC28-205ENST00000558248 ARSHQ5FYA8 562 aa5.63□□□□□ -1.51
LRRC28-205ENST00000558248 FLAD1Q8NFF5 587 aa5.63□□□□□ -1.51
LRRC28-205ENST00000558248 BAHD1Q8TBE0 780 aaPredicted RBP5.63□□□□□ -1.51
LRRC28-205ENST00000558248 KIF2CQ99661 725 aa5.63□□□□□ -1.51
LRRC28-205ENST00000558248 PRDM7Q9NQW5 492 aa5.63□□□□□ -1.51
LRRC28-205ENST00000558248 NCOA1Q15788 1441 aa5.63□□□□□ -1.51
LRRC28-205ENST00000558248 RICTORQ6R327 1708 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 SLC22A31A6NKX4 558 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 PAPLNO95428 1278 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 RAC2P15153 192 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 TPP2P29144 1249 aaPredicted RBP5.62□□□□□ -1.51
LRRC28-205ENST00000558248 LTKP29376 864 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 AFMP43652 599 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 LDLRAD1Q5T700 205 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 OVOS1Q6IE37 1185 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 NLRC3Q7RTR2 1065 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 CREG2Q8IUH2 290 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 SLITRK4Q8IW52 837 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 Q96M66 194 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 FMNL2Q96PY5 1086 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 ALPK1Q96QP1 1244 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 GPR62Q9BZJ7 368 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 METTL14Q9HCE5 456 aaKnown RBP5.62□□□□□ -1.51
LRRC28-205ENST00000558248 DUSP13Q9UII6 198 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 ZFYVE16Q7Z3T8 1539 aa5.62□□□□□ -1.51
LRRC28-205ENST00000558248 DNAJA2O60884 412 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 CCNFP41002 786 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 ZNF394Q53GI3 561 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 CCDC181Q5TID7 509 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 CDCP2Q5VXM1 449 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 ZNF654Q8IZM8 581 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 TMEM40Q8WWA1 233 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 FAM168AQ92567 244 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 FERD3LQ96RJ6 166 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 TANGO6Q9C0B7 1094 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 MYH16Q9H6N6 1097 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 SLAMF8Q9P0V8 285 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 RIPOR2Q9Y4F9 1068 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 PCDHGB7Q9Y5F8 929 aa5.61□□□□□ -1.51
LRRC28-205ENST00000558248 ATP10AO60312 1499 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 MAGI2Q86UL8 1455 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 TRAPPC8Q9Y2L5 1435 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 RAB11FIP3O75154 756 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 CLEC3AO75596 197 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 CLCQ05315 142 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 KCNMB1Q16558 191 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 GORABQ5T7V8 394 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 TSPYL5Q86VY4 417 aaPredicted RBP5.6□□□□□ -1.51
LRRC28-205ENST00000558248 ZSWIM9Q86XI8 627 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 ARMC5Q96C12 935 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 EAF1Q96JC9 268 aaPredicted RBP5.6□□□□□ -1.51
LRRC28-205ENST00000558248 DUSP15Q9H1R2 295 aaPredicted RBP5.6□□□□□ -1.51
LRRC28-205ENST00000558248 CNNM2Q9H8M5 875 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 CTNND2Q9UQB3 1225 aa5.6□□□□□ -1.51
LRRC28-205ENST00000558248 EFCAB5A4FU69 1503 aa5.59□□□□□ -1.51
LRRC28-205ENST00000558248 ZMYM4Q5VZL5 1548 aa5.59□□□□□ -1.51
LRRC28-205ENST00000558248 MEIS3P2A8K0S8 358 aa5.59□□□□□ -1.51
LRRC28-205ENST00000558248 GDNFP39905 211 aa5.59□□□□□ -1.51
LRRC28-205ENST00000558248 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
LRRC28-205ENST00000558248 FBXW10Q5XX13 1052 aa5.59□□□□□ -1.51
LRRC28-205ENST00000558248 ZNF526Q8TF50 670 aaPredicted RBP5.59□□□□□ -1.51
LRRC28-205ENST00000558248 ATG4CQ96DT6 458 aa5.59□□□□□ -1.51
LRRC28-205ENST00000558248 DNAJC2Q99543 621 aaKnown RBP5.59□□□□□ -1.51
LRRC28-205ENST00000558248 LNPKQ9C0E8 428 aa5.59□□□□□ -1.51
LRRC28-205ENST00000558248 DDX41Q9UJV9 622 aaKnown RBP5.59□□□□□ -1.51
LRRC28-205ENST00000558248 CAMSAP1Q5T5Y3 1602 aa5.59□□□□□ -1.52
LRRC28-205ENST00000558248 HECW1Q76N89 1606 aa5.59□□□□□ -1.52
LRRC28-205ENST00000558248 RAPGEF2Q9Y4G8 1499 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 hCG_2014768A0A024R1R8 64 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 LOC102724159A0A0B4J2E5 919 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 UBOX5O94941 541 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 ESR1P03372 595 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 SRFP11831 508 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 EGR3Q06889 387 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 NMIQ13287 307 aaPredicted RBP5.58□□□□□ -1.52
LRRC28-205ENST00000558248 COL9A2Q14055 689 aaPredicted RBP5.58□□□□□ -1.52
LRRC28-205ENST00000558248 PWP2Q15269 919 aaKnown RBP5.58□□□□□ -1.52
LRRC28-205ENST00000558248 GAB4Q2WGN9 574 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 ZNF662Q6ZS27 426 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 TTC6Q86TZ1 520 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 ENOX1Q8TC92 643 aaKnown RBP5.58□□□□□ -1.52
LRRC28-205ENST00000558248 DHX38Q92620 1227 aaKnown RBP5.58□□□□□ -1.52
LRRC28-205ENST00000558248 KIRREL1Q96J84 757 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 DHRS1Q96LJ7 313 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 MKRN2Q9H000 416 aaKnown RBP5.58□□□□□ -1.52
LRRC28-205ENST00000558248 FAM53CQ9NYF3 392 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 TMEM59LQ9UK28 342 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 ZNRF3Q9ULT6 936 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.58□□□□□ -1.52
LRRC28-205ENST00000558248 GOLGA3Q08378 1498 aa5.58□□□□□ -1.52
LRRC28-205ENST00000558248 C9orf84Q5VXU9 1444 aa5.57□□□□□ -1.52
LRRC28-205ENST00000558248 SCAPERQ9BY12 1400 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms