RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 GSC2O15499 205 aa8.44□□□□□ -1.06
CLPX-202ENST00000558103 HNRNPUQ00839 825 aaKnown RBP eCLIP8.44□□□□□ -1.06
CLPX-202ENST00000558103 KIF4BQ2VIQ3 1234 aa8.44□□□□□ -1.06
CLPX-202ENST00000558103 RNF43Q68DV7 783 aa8.44□□□□□ -1.06
CLPX-202ENST00000558103 MCTP1Q6DN14 999 aa8.44□□□□□ -1.06
CLPX-202ENST00000558103 GRIN3AQ8TCU5 1115 aa8.44□□□□□ -1.06
CLPX-202ENST00000558103 FBLIM1Q8WUP2 373 aa8.44□□□□□ -1.06
CLPX-202ENST00000558103 CBX8Q9HC52 389 aa8.44□□□□□ -1.06
CLPX-202ENST00000558103 TTF2Q9UNY4 1162 aaKnown RBP8.44□□□□□ -1.06
CLPX-202ENST00000558103 ACTL7BQ9Y614 415 aa8.44□□□□□ -1.06
CLPX-202ENST00000558103 MAP3K19Q56UN5 1328 aa8.44□□□□□ -1.06
CLPX-202ENST00000558103 UBR3Q6ZT12 1888 aa8.44□□□□□ -1.06
CLPX-202ENST00000558103 ARID1BQ8NFD5 2236 aaPredicted RBP8.44□□□□□ -1.06
CLPX-202ENST00000558103 MAP2P11137 1827 aaKnown RBP8.43□□□□□ -1.06
CLPX-202ENST00000558103 IGLV1-40P01703 118 aa8.43□□□□□ -1.06
CLPX-202ENST00000558103 MAP1SQ66K74 1059 aaPredicted RBP8.43□□□□□ -1.06
CLPX-202ENST00000558103 FAM161BQ96MY7 647 aa8.43□□□□□ -1.06
CLPX-202ENST00000558103 CACNA2D2Q9NY47 1150 aa8.43□□□□□ -1.06
CLPX-202ENST00000558103 CYP8B1Q9UNU6 501 aa8.43□□□□□ -1.06
CLPX-202ENST00000558103 PNPLA7Q6ZV29 1317 aa8.43□□□□□ -1.06
CLPX-202ENST00000558103 FAM95CA0A1B0GW59 222 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 HOXC9P31274 260 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 ASPAP45381 313 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 NFIAQ12857 509 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 LRRC14Q15048 493 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
CLPX-202ENST00000558103 BCL2L13Q9BXK5 485 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 FAM105AQ9NUU6 356 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 AP4E1Q9UPM8 1137 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 C4BP0C0L5 1744 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 CEP350Q5VT06 3117 aa8.42□□□□□ -1.06
CLPX-202ENST00000558103 ST20-MTHFSA0A0A6YYL1 179 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.41□□□□□ -1.06
CLPX-202ENST00000558103 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 SORBS3O60504 671 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 CELA3AP09093 270 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 YBX3P16989 372 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLPX-202ENST00000558103 FBLN1P23142 703 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 MFAP1P55081 439 aaKnown RBP8.41□□□□□ -1.06
CLPX-202ENST00000558103 ID3Q02535 119 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 NFKBIBQ15653 356 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 RASIP1Q5U651 963 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 MPRIPQ6WCQ1 1025 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 GPBAR1Q8TDU6 330 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 COG3Q96JB2 828 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 YIPF2Q9BWQ6 316 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 PCDHGC5Q9Y5F6 944 aa8.41□□□□□ -1.06
CLPX-202ENST00000558103 CTSHP09668 335 aa8.4□□□□□ -1.06
CLPX-202ENST00000558103 TAF1CQ15572 869 aaPredicted RBP8.4□□□□□ -1.06
CLPX-202ENST00000558103 CCDC85BQ15834 202 aaPredicted RBP8.4□□□□□ -1.06
CLPX-202ENST00000558103 PCNX4Q63HM2 1172 aa8.4□□□□□ -1.06
CLPX-202ENST00000558103 SCARA3Q6AZY7 606 aa8.4□□□□□ -1.06
CLPX-202ENST00000558103 PAOXQ6QHF9 649 aa8.4□□□□□ -1.06
CLPX-202ENST00000558103 LTV1Q96GA3 475 aaPredicted RBP8.4□□□□□ -1.06
CLPX-202ENST00000558103 ACSS3Q9H6R3 686 aa8.4□□□□□ -1.06
CLPX-202ENST00000558103 DISC1Q9NRI5 854 aa8.4□□□□□ -1.06
CLPX-202ENST00000558103 NCAPD2Q15021 1401 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 SMG6Q86US8 1419 aaKnown RBP8.39□□□□□ -1.07
CLPX-202ENST00000558103 NFICP08651 508 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 ZC3H12AQ5D1E8 599 aaKnown RBP8.39□□□□□ -1.07
CLPX-202ENST00000558103 MEI1Q5TIA1 1274 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 LLGL2Q6P1M3 1020 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 ZCRB1Q8TBF4 217 aaKnown RBP8.39□□□□□ -1.07
CLPX-202ENST00000558103 GIPC2Q8TF65 315 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 DBNDD2Q9BQY9 259 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 KRTAP4-2Q9BYR5 136 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 ATXN3LQ9H3M9 355 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 MRS2Q9HD23 443 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 RNF112Q9ULX5 631 aa8.39□□□□□ -1.07
CLPX-202ENST00000558103 INSRP06213 1382 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 KIF24Q5T7B8 1368 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 USP47Q96K76 1375 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 CGNL1Q0VF96 1302 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 FYB1O15117 783 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 RAB6AP20340 208 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 AMPHP49418 695 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 MAP7Q14244 749 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 RRS1Q15050 365 aaKnown RBP8.38□□□□□ -1.07
CLPX-202ENST00000558103 NBPF6Q5VWK0 638 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 TTBK2Q6IQ55 1244 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 SYTL4Q96C24 671 aaPredicted RBP8.38□□□□□ -1.07
CLPX-202ENST00000558103 NBPF4Q96M43 638 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 SEMA6CQ9H3T2 930 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 KIF13BQ9NQT8 1826 aa8.38□□□□□ -1.07
CLPX-202ENST00000558103 COL5A3P25940 1745 aaPredicted RBP8.37□□□□□ -1.07
CLPX-202ENST00000558103 KIAA1551Q9HCM1 1747 aa8.37□□□□□ -1.07
CLPX-202ENST00000558103 FLT4P35916 1363 aa8.37□□□□□ -1.07
CLPX-202ENST00000558103 ZNF831Q5JPB2 1677 aa8.37□□□□□ -1.07
CLPX-202ENST00000558103 POLD1P28340 1107 aa8.37□□□□□ -1.07
CLPX-202ENST00000558103 ST13P50502 369 aaKnown RBP8.37□□□□□ -1.07
CLPX-202ENST00000558103 ERVK-24P63145 666 aa8.37□□□□□ -1.07
CLPX-202ENST00000558103 ZDHHC13Q8IUH4 622 aa8.37□□□□□ -1.07
CLPX-202ENST00000558103 NLGN2Q8NFZ4 835 aa8.37□□□□□ -1.07
CLPX-202ENST00000558103 TFCP2L1Q9NZI6 479 aa8.37□□□□□ -1.07
CLPX-202ENST00000558103 PCDH11XQ9BZA7 1347 aa8.36□□□□□ -1.07
CLPX-202ENST00000558103 PCDH11YQ9BZA8 1340 aa8.36□□□□□ -1.07
CLPX-202ENST00000558103 PAX4O43316 350 aa8.36□□□□□ -1.07
CLPX-202ENST00000558103 TXKP42681 527 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms