RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 MSL3Q8N5Y2 521 aaKnown RBP19.06■□□□□ 0.64
SCFD1-224ENST00000557713 GPATCH3Q96I76 525 aa19.06■□□□□ 0.64
SCFD1-224ENST00000557713 GUCD1Q96NT3 240 aa19.06■□□□□ 0.64
SCFD1-224ENST00000557713 PLXNA1Q9UIW2 1896 aa19.05■□□□□ 0.64
SCFD1-224ENST00000557713 SMCHD1A6NHR9 2005 aa19.05■□□□□ 0.64
SCFD1-224ENST00000557713 DNAJC25-GNG10A0A024R161 153 aa19.05■□□□□ 0.64
SCFD1-224ENST00000557713 PATL2C9JE40 543 aaKnown RBP19.05■□□□□ 0.64
SCFD1-224ENST00000557713 M0R2C6 588 aa19.05■□□□□ 0.64
SCFD1-224ENST00000557713 ADAMTS4O75173 837 aa19.05■□□□□ 0.64
SCFD1-224ENST00000557713 AKR1A1P14550 325 aa19.05■□□□□ 0.64
SCFD1-224ENST00000557713 MAMDC4Q6UXC1 1216 aa19.05■□□□□ 0.64
SCFD1-224ENST00000557713 IFNL3Q8IZI9 196 aa19.05■□□□□ 0.64
SCFD1-224ENST00000557713 ZNF444Q8N0Y2 327 aaPredicted RBP19.05■□□□□ 0.64
SCFD1-224ENST00000557713 CNPY2Q9Y2B0 182 aa19.05■□□□□ 0.64
SCFD1-224ENST00000557713 ZBED4O75132 1171 aa19.04■□□□□ 0.64
SCFD1-224ENST00000557713 PRDM1O75626 825 aa19.04■□□□□ 0.64
SCFD1-224ENST00000557713 SNAI1O95863 264 aaPredicted RBP19.04■□□□□ 0.64
SCFD1-224ENST00000557713 TDO2P48775 406 aa19.04■□□□□ 0.64
SCFD1-224ENST00000557713 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.04■□□□□ 0.64
SCFD1-224ENST00000557713 DDX11Q96FC9 970 aa19.04■□□□□ 0.64
SCFD1-224ENST00000557713 CEP95Q96GE4 821 aa19.04■□□□□ 0.64
SCFD1-224ENST00000557713 ZNF287Q9HBT7 754 aa19.04■□□□□ 0.64
SCFD1-224ENST00000557713 MTMR4Q9NYA4 1195 aa19.04■□□□□ 0.64
SCFD1-224ENST00000557713 SYNPO2Q9UMS6 1093 aa19.04■□□□□ 0.64
SCFD1-224ENST00000557713 TACC3Q9Y6A5 838 aa19.04■□□□□ 0.64
SCFD1-224ENST00000557713 SYNGAP1Q96PV0 1343 aa19.03■□□□□ 0.64
SCFD1-224ENST00000557713 A0A1W2PQ45 241 aaPredicted RBP19.03■□□□□ 0.64
SCFD1-224ENST00000557713 A0A1W2PQY0 241 aa19.03■□□□□ 0.64
SCFD1-224ENST00000557713 APPP05067 770 aa19.03■□□□□ 0.64
SCFD1-224ENST00000557713 ITGB8P26012 769 aa19.03■□□□□ 0.64
SCFD1-224ENST00000557713 CPXCR1Q8N123 301 aa19.03■□□□□ 0.64
SCFD1-224ENST00000557713 LENG1Q96BZ8 264 aaPredicted RBP19.03■□□□□ 0.64
SCFD1-224ENST00000557713 TSEN34Q9BSV6 310 aaKnown RBP19.03■□□□□ 0.64
SCFD1-224ENST00000557713 SLC38A10Q9HBR0 1119 aa19.03■□□□□ 0.64
SCFD1-224ENST00000557713 FEM1BQ9UK73 627 aa19.03■□□□□ 0.64
SCFD1-224ENST00000557713 FAM184BQ9ULE4 1060 aa19.03■□□□□ 0.64
SCFD1-224ENST00000557713 LAMA2P24043 3122 aaKnown RBP19.03■□□□□ 0.64
SCFD1-224ENST00000557713 CLTBP09497 229 aa19.02■□□□□ 0.64
SCFD1-224ENST00000557713 CCSAPQ6IQ19 270 aaPredicted RBP19.02■□□□□ 0.64
SCFD1-224ENST00000557713 ZNF467Q7Z7K2 595 aaPredicted RBP19.02■□□□□ 0.64
SCFD1-224ENST00000557713 GMCL1P1Q8NEA9 526 aa19.02■□□□□ 0.64
SCFD1-224ENST00000557713 KLHDC9Q8NEP7 349 aa19.02■□□□□ 0.64
SCFD1-224ENST00000557713 NEDD1Q8NHV4 660 aa19.02■□□□□ 0.64
SCFD1-224ENST00000557713 KIFC2Q96AC6 838 aa19.02■□□□□ 0.64
SCFD1-224ENST00000557713 FAM161BQ96MY7 647 aa19.02■□□□□ 0.64
SCFD1-224ENST00000557713 SEC62Q99442 399 aaKnown RBP19.02■□□□□ 0.64
SCFD1-224ENST00000557713 RAVER2Q9HCJ3 691 aaKnown RBP19.02■□□□□ 0.64
SCFD1-224ENST00000557713 A0A0C4DFX4 3053 aa19.02■□□□□ 0.63
SCFD1-224ENST00000557713 TTC41PQ6P2S7 1318 aa19.01■□□□□ 0.63
SCFD1-224ENST00000557713 KIAA0355O15063 1070 aa19.01■□□□□ 0.63
SCFD1-224ENST00000557713 TTLL1O95922 423 aa19.01■□□□□ 0.63
SCFD1-224ENST00000557713 SLC4A3P48751 1232 aa19.01■□□□□ 0.63
SCFD1-224ENST00000557713 ACLYP53396 1101 aa19.01■□□□□ 0.63
SCFD1-224ENST00000557713 LRRFIP1Q32MZ4 808 aaKnown RBP19.01■□□□□ 0.63
SCFD1-224ENST00000557713 ZNF697Q5TEC3 545 aa19.01■□□□□ 0.63
SCFD1-224ENST00000557713 PI4K2BQ8TCG2 481 aa19.01■□□□□ 0.63
SCFD1-224ENST00000557713 SYNRGQ9UMZ2 1314 aa19■□□□□ 0.63
SCFD1-224ENST00000557713 OAZ1P54368 228 aa19■□□□□ 0.63
SCFD1-224ENST00000557713 SMAD3P84022 425 aaKnown RBP19■□□□□ 0.63
SCFD1-224ENST00000557713 ANKRD33Q7Z3H0 272 aa19■□□□□ 0.63
SCFD1-224ENST00000557713 CHST13Q8NET6 341 aa19■□□□□ 0.63
SCFD1-224ENST00000557713 FGD4Q96M96 766 aa19■□□□□ 0.63
SCFD1-224ENST00000557713 TOX2Q96NM4 488 aa19■□□□□ 0.63
SCFD1-224ENST00000557713 NACAP1Q9BZK3 213 aa19■□□□□ 0.63
SCFD1-224ENST00000557713 CTDP1Q9Y5B0 961 aaPredicted RBP19■□□□□ 0.63
SCFD1-224ENST00000557713 PCDHB15Q9Y5E8 787 aa19■□□□□ 0.63
SCFD1-224ENST00000557713 PLIN4Q96Q06 1357 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 MOXD2PA6NHM9 499 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 ERC2O15083 957 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 DUSP11O75319 330 aaKnown RBP18.99■□□□□ 0.63
SCFD1-224ENST00000557713 BMP3P12645 472 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 EPHB4P54760 987 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 FAAP100Q0VG06 881 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 ACVR2BQ13705 512 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 KCNA10Q16322 511 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 ZMYM1Q5SVZ6 1142 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 SLFN13Q68D06 897 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 LRRC47Q8N1G4 583 aaKnown RBP18.99■□□□□ 0.63
SCFD1-224ENST00000557713 ANKRD35Q8N283 1001 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 OTUD7AQ8TE49 926 aaPredicted RBP18.99■□□□□ 0.63
SCFD1-224ENST00000557713 SEMA6BQ9H3T3 888 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.99■□□□□ 0.63
SCFD1-224ENST00000557713 FBXO40Q9UH90 709 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 ZHX1Q9UKY1 873 aaPredicted RBP18.99■□□□□ 0.63
SCFD1-224ENST00000557713 MYH4Q9Y623 1939 aa18.99■□□□□ 0.63
SCFD1-224ENST00000557713 ADCY6O43306 1168 aa18.98■□□□□ 0.63
SCFD1-224ENST00000557713 PQBP1O60828 265 aaKnown RBP18.98■□□□□ 0.63
SCFD1-224ENST00000557713 TSPY3P0CV98 308 aa18.98■□□□□ 0.63
SCFD1-224ENST00000557713 TSPY8P0CW00 308 aa18.98■□□□□ 0.63
SCFD1-224ENST00000557713 FDX1P10109 184 aa18.98■□□□□ 0.63
SCFD1-224ENST00000557713 TFAP4Q01664 338 aa18.98■□□□□ 0.63
SCFD1-224ENST00000557713 PDE4BQ07343 736 aa18.98■□□□□ 0.63
SCFD1-224ENST00000557713 NUP133Q8WUM0 1156 aa18.98■□□□□ 0.63
SCFD1-224ENST00000557713 CDX2Q99626 313 aaPredicted RBP18.98■□□□□ 0.63
SCFD1-224ENST00000557713 ABHD16BQ9H3Z7 469 aa18.98■□□□□ 0.63
SCFD1-224ENST00000557713 STARD7Q9NQZ5 370 aa18.98■□□□□ 0.63
SCFD1-224ENST00000557713 TMEM39AQ9NV64 488 aa18.98■□□□□ 0.63
SCFD1-224ENST00000557713 MYADML2A6NDP7 307 aa18.97■□□□□ 0.63
SCFD1-224ENST00000557713 TMEM232C9JQI7 657 aa18.97■□□□□ 0.63
SCFD1-224ENST00000557713 RAG1P15918 1043 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms