RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PNMA3Q9UL41 463 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 PPP1R9AQ9ULJ8 1098 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 PLEKHA8P1O95397 391 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 DSG3P32926 999 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 SNAP25P60880 206 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 SMCR8Q8TEV9 937 aaPredicted RBP17.81■□□□□ 0.44
NEDD1-213ENST00000557644 PARK7Q99497 189 aaKnown RBP17.81■□□□□ 0.44
NEDD1-213ENST00000557644 MAP3K14Q99558 947 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 ZCCHC17Q9NP64 241 aaKnown RBP17.81■□□□□ 0.44
NEDD1-213ENST00000557644 ST18O60284 1047 aa17.8■□□□□ 0.44
NEDD1-213ENST00000557644 ADD1P35611 737 aaKnown RBP17.8■□□□□ 0.44
NEDD1-213ENST00000557644 ME3Q16798 604 aa17.8■□□□□ 0.44
NEDD1-213ENST00000557644 RTN1Q16799 776 aa17.8■□□□□ 0.44
NEDD1-213ENST00000557644 CCDC82Q8N4S0 544 aa17.8■□□□□ 0.44
NEDD1-213ENST00000557644 ZNF274Q96GC6 653 aaPredicted RBP17.8■□□□□ 0.44
NEDD1-213ENST00000557644 PRR12Q9ULL5 1215 aa17.8■□□□□ 0.44
NEDD1-213ENST00000557644 TBC1D8O95759 1140 aa17.8■□□□□ 0.44
NEDD1-213ENST00000557644 RLFQ13129 1914 aa17.8■□□□□ 0.44
NEDD1-213ENST00000557644 BTNL9Q6UXG8 535 aa17.8■□□□□ 0.44
NEDD1-213ENST00000557644 PRPF38AQ8NAV1 312 aaKnown RBP17.8■□□□□ 0.44
NEDD1-213ENST00000557644 CHURC1Q8WUH1 139 aa17.8■□□□□ 0.44
NEDD1-213ENST00000557644 HOXC10Q9NYD6 342 aa17.8■□□□□ 0.44
NEDD1-213ENST00000557644 CA12O43570 354 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 CYTH3O43739 400 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 DTNBO60941 627 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 ALDH1A1P00352 501 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 KIF5BP33176 963 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 SYDE2Q5VT97 1194 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 FAM160B2Q86V87 743 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 SRBD1Q8N5C6 995 aaKnown RBP17.79■□□□□ 0.44
NEDD1-213ENST00000557644 NECAB1Q8N987 351 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 VAT1LQ9HCJ6 419 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 TXNRD2Q9NNW7 524 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 LIMCH1Q9UPQ0 1083 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 PLA2G6O60733 806 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 PPFIA3O75145 1194 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 RCAN1P53805 252 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 MAP2K1Q02750 393 aaPredicted RBP17.79■□□□□ 0.44
NEDD1-213ENST00000557644 ADGRF4Q8IZF3 695 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 CPA4Q9UI42 421 aa17.79■□□□□ 0.44
NEDD1-213ENST00000557644 VWA5AO00534 786 aa17.78■□□□□ 0.44
NEDD1-213ENST00000557644 SCRN1Q12765 414 aa17.78■□□□□ 0.44
NEDD1-213ENST00000557644 ANKRD13CQ8N6S4 541 aa17.78■□□□□ 0.44
NEDD1-213ENST00000557644 PIBF1Q8WXW3 757 aa17.78■□□□□ 0.44
NEDD1-213ENST00000557644 PAGR1Q9BTK6 254 aa17.78■□□□□ 0.44
NEDD1-213ENST00000557644 ZFYVE28Q9HCC9 887 aa17.78■□□□□ 0.44
NEDD1-213ENST00000557644 RBPJLQ9UBG7 517 aa17.78■□□□□ 0.44
NEDD1-213ENST00000557644 ADAMTS5Q9UNA0 930 aa17.78■□□□□ 0.44
NEDD1-213ENST00000557644 ADGRA2Q96PE1 1338 aa17.78■□□□□ 0.44
NEDD1-213ENST00000557644 TLR2O60603 784 aa17.77■□□□□ 0.44
NEDD1-213ENST00000557644 TMTC3Q6ZXV5 915 aa17.77■□□□□ 0.44
NEDD1-213ENST00000557644 SLKQ9H2G2 1235 aaPredicted RBP17.77■□□□□ 0.44
NEDD1-213ENST00000557644 WBP1LQ9NX94 342 aa17.77■□□□□ 0.44
NEDD1-213ENST00000557644 BTBD7Q9P203 1132 aa17.77■□□□□ 0.44
NEDD1-213ENST00000557644 TSKSQ9UJT2 592 aa17.77■□□□□ 0.44
NEDD1-213ENST00000557644 BAZ2BQ9UIF8 2168 aaKnown RBP17.77■□□□□ 0.44
NEDD1-213ENST00000557644 NID2Q14112 1375 aa17.77■□□□□ 0.44
NEDD1-213ENST00000557644 PARP14Q460N5 1801 aa17.77■□□□□ 0.44
NEDD1-213ENST00000557644 DHX16O60231 1041 aaKnown RBP17.77■□□□□ 0.44
NEDD1-213ENST00000557644 JMJD4Q9H9V9 463 aa17.77■□□□□ 0.44
NEDD1-213ENST00000557644 RBM28Q9NW13 759 aaKnown RBP17.77■□□□□ 0.44
NEDD1-213ENST00000557644 MYPNQ86TC9 1320 aa17.77■□□□□ 0.43
NEDD1-213ENST00000557644 PFKFB2O60825 505 aa17.76■□□□□ 0.43
NEDD1-213ENST00000557644 CNMDO75829 334 aa17.76■□□□□ 0.43
NEDD1-213ENST00000557644 LBX2Q6XYB7 198 aa17.76■□□□□ 0.43
NEDD1-213ENST00000557644 SLC38A10Q9HBR0 1119 aa17.76■□□□□ 0.43
NEDD1-213ENST00000557644 hCG_1642624A0A1W2PR95 340 aa17.76■□□□□ 0.43
NEDD1-213ENST00000557644 TAL1P17542 331 aaPredicted RBP17.76■□□□□ 0.43
NEDD1-213ENST00000557644 ST3GAL1Q11201 340 aa17.76■□□□□ 0.43
NEDD1-213ENST00000557644 TMEM132BQ14DG7 1078 aa17.76■□□□□ 0.43
NEDD1-213ENST00000557644 JMYQ8N9B5 988 aa17.76■□□□□ 0.43
NEDD1-213ENST00000557644 REPS2Q8NFH8 660 aa17.76■□□□□ 0.43
NEDD1-213ENST00000557644 GNAQP50148 359 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 FUT2Q10981 343 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 Q3C1V9 767 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 CCDC174Q6PII3 467 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 HOMER1Q86YM7 354 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 CPXCR1Q8N123 301 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 BEGAINQ9BUH8 593 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 RIOX1Q9H6W3 641 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 NTRK3Q16288 839 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 C17orf99Q6UX52 265 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 GTF3C6Q969F1 213 aa17.75■□□□□ 0.43
NEDD1-213ENST00000557644 RANBP17Q9H2T7 1088 aaKnown RBP17.75■□□□□ 0.43
NEDD1-213ENST00000557644 RAVER2Q9HCJ3 691 aaKnown RBP17.75■□□□□ 0.43
NEDD1-213ENST00000557644 CCDC196A0A1B0GTZ2 297 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 ECM2O94769 699 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-213ENST00000557644 GCLCP48506 637 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-213ENST00000557644 PLS1Q14651 629 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 PHKBQ93100 1093 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 PIGSQ96S52 555 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 SPZ1Q9BXG8 430 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 ZNF214Q9UL59 606 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-213ENST00000557644 ZNF536O15090 1300 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 ZBED4O75132 1171 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 BCRP11274 1271 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 PPP2R5BQ15173 497 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 CDC37Q16543 378 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-213ENST00000557644 TMX3Q96JJ7 454 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms