RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 SMIM22K7EJ46 135 aa22.1■■□□□ 1.13
ABCD4-228ENST00000557588 SNAI1O95863 264 aaPredicted RBP22.1■■□□□ 1.13
ABCD4-228ENST00000557588 KCNA10Q16322 511 aa22.1■■□□□ 1.13
ABCD4-228ENST00000557588 HSP90AB4PQ58FF6 505 aa22.1■■□□□ 1.13
ABCD4-228ENST00000557588 FAM83BQ5T0W9 1011 aa22.1■■□□□ 1.13
ABCD4-228ENST00000557588 AKNAD1Q5T1N1 836 aa22.1■■□□□ 1.13
ABCD4-228ENST00000557588 RHPN1Q8TCX5 695 aa22.1■■□□□ 1.13
ABCD4-228ENST00000557588 GAS2L1Q99501 681 aaPredicted RBP22.1■■□□□ 1.13
ABCD4-228ENST00000557588 TEX13BQ9BXU2 312 aa22.1■■□□□ 1.13
ABCD4-228ENST00000557588 MYH7P12883 1935 aa22.1■■□□□ 1.13
ABCD4-228ENST00000557588 ZBED9Q6R2W3 1325 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 DNAJC25-GNG10A0A024R161 153 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 CYP2D7A0A087X1C5 515 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 MYADML2A6NDP7 307 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 DUSP11O75319 330 aaKnown RBP22.09■■□□□ 1.13
ABCD4-228ENST00000557588 ADD2P35612 726 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 CDK7P50613 346 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 TMEM240Q5SV17 173 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 C16orf59Q7L2K0 433 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 ZNF467Q7Z7K2 595 aaPredicted RBP22.09■■□□□ 1.13
ABCD4-228ENST00000557588 AMOTL1Q8IY63 956 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 GLT1D1Q96MS3 346 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 THEGQ9P2T0 379 aa22.09■■□□□ 1.13
ABCD4-228ENST00000557588 NCOR1O75376 2440 aa22.08■■□□□ 1.13
ABCD4-228ENST00000557588 CCER2I3L3R5 266 aa22.08■■□□□ 1.13
ABCD4-228ENST00000557588 PBX2P40425 430 aa22.08■■□□□ 1.13
ABCD4-228ENST00000557588 PSRC1Q6PGN9 363 aaPredicted RBP22.08■■□□□ 1.13
ABCD4-228ENST00000557588 ZHX1Q9UKY1 873 aaPredicted RBP22.08■■□□□ 1.13
ABCD4-228ENST00000557588 CHD7Q9P2D1 2997 aa22.07■■□□□ 1.12
ABCD4-228ENST00000557588 USP17L12C9JPN9 530 aa22.07■■□□□ 1.12
ABCD4-228ENST00000557588 USP17L21D6R901 530 aa22.07■■□□□ 1.12
ABCD4-228ENST00000557588 SNRNP48Q6IEG0 339 aaKnown RBP22.07■■□□□ 1.12
ABCD4-228ENST00000557588 CLASRPQ8N2M8 674 aaKnown RBP22.07■■□□□ 1.12
ABCD4-228ENST00000557588 PCSK9Q8NBP7 692 aaKnown RBP22.07■■□□□ 1.12
ABCD4-228ENST00000557588 SLF1Q9BQI6 1058 aa22.07■■□□□ 1.12
ABCD4-228ENST00000557588 UPF3AQ9H1J1 476 aaKnown RBP22.07■■□□□ 1.12
ABCD4-228ENST00000557588 PRDM12Q9H4Q4 367 aa22.07■■□□□ 1.12
ABCD4-228ENST00000557588 BDP1A6H8Y1 2624 aa22.07■■□□□ 1.12
ABCD4-228ENST00000557588 ADCY6O43306 1168 aa22.06■■□□□ 1.12
ABCD4-228ENST00000557588 CSF2RAP15509 400 aa22.06■■□□□ 1.12
ABCD4-228ENST00000557588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.06■■□□□ 1.12
ABCD4-228ENST00000557588 FAM126BQ8IXS8 530 aa22.06■■□□□ 1.12
ABCD4-228ENST00000557588 TMEM199Q8N511 208 aa22.06■■□□□ 1.12
ABCD4-228ENST00000557588 ASB2Q96Q27 587 aa22.06■■□□□ 1.12
ABCD4-228ENST00000557588 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.06■■□□□ 1.12
ABCD4-228ENST00000557588 PAG1Q9NWQ8 432 aa22.06■■□□□ 1.12
ABCD4-228ENST00000557588 MCM3APO60318 1980 aa22.06■■□□□ 1.12
ABCD4-228ENST00000557588 GBF1Q92538 1859 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 A0A0U1RQG5 324 aaPredicted RBP22.05■■□□□ 1.12
ABCD4-228ENST00000557588 GRXCR1A8MXD5 290 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 ATP2A1O14983 1001 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 ASGR1P07306 291 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 C6orf222P0C671 652 aaPredicted RBP22.05■■□□□ 1.12
ABCD4-228ENST00000557588 SLFNL1Q499Z3 407 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 CCDC129Q6ZRS4 1044 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 KIF1BPQ96EK5 621 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 DDX11Q96FC9 970 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 DDRGK1Q96HY6 314 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.05■■□□□ 1.129e-7■■■□□ 18.5
ABCD4-228ENST00000557588 RIPK3Q9Y572 518 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 XIRP2A4UGR9 3374 aa22.05■■□□□ 1.12
ABCD4-228ENST00000557588 ARVCFO00192 962 aa22.04■■□□□ 1.12
ABCD4-228ENST00000557588 RAD21O60216 631 aa22.04■■□□□ 1.12
ABCD4-228ENST00000557588 IFIT2P09913 472 aaKnown RBP22.04■■□□□ 1.12
ABCD4-228ENST00000557588 GJA9P57773 515 aa22.04■■□□□ 1.12
ABCD4-228ENST00000557588 IRX5P78411 483 aaPredicted RBP22.04■■□□□ 1.12
ABCD4-228ENST00000557588 ACVR2BQ13705 512 aa22.04■■□□□ 1.12
ABCD4-228ENST00000557588 RAB30Q15771 203 aa22.04■■□□□ 1.12
ABCD4-228ENST00000557588 ADAMTS19Q8TE59 1207 aa22.04■■□□□ 1.12
ABCD4-228ENST00000557588 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.04■■□□□ 1.12
ABCD4-228ENST00000557588 ADGRE1Q14246 886 aa22.03■■□□□ 1.12
ABCD4-228ENST00000557588 ZNF365Q70YC5 407 aa22.03■■□□□ 1.12
ABCD4-228ENST00000557588 PPM1EQ8WY54 764 aa22.03■■□□□ 1.12
ABCD4-228ENST00000557588 FGD4Q96M96 766 aa22.03■■□□□ 1.12
ABCD4-228ENST00000557588 NUP88Q99567 741 aaPredicted RBP22.03■■□□□ 1.12
ABCD4-228ENST00000557588 PPP1R12CQ9BZL4 782 aa22.03■■□□□ 1.12
ABCD4-228ENST00000557588 ABHD16BQ9H3Z7 469 aa22.03■■□□□ 1.12
ABCD4-228ENST00000557588 SPC25Q9HBM1 224 aa22.03■■□□□ 1.12
ABCD4-228ENST00000557588 LRRC37A2A6NM11 1700 aa22.03■■□□□ 1.12
ABCD4-228ENST00000557588 NKX3-2P78367 333 aa22.02■■□□□ 1.12
ABCD4-228ENST00000557588 MRPS5P82675 430 aaKnown RBP22.02■■□□□ 1.12
ABCD4-228ENST00000557588 UBE3CQ15386 1083 aa22.02■■□□□ 1.12
ABCD4-228ENST00000557588 CCDC144BQ3MJ40 725 aa22.02■■□□□ 1.12
ABCD4-228ENST00000557588 CTR9Q6PD62 1173 aa22.02■■□□□ 1.12
ABCD4-228ENST00000557588 HERVK_113Q902F9 699 aa22.02■■□□□ 1.12
ABCD4-228ENST00000557588 ARPP21Q9UBL0 812 aaPredicted RBP22.02■■□□□ 1.12
ABCD4-228ENST00000557588 MYO9BQ13459 2157 aa22.02■■□□□ 1.12
ABCD4-228ENST00000557588 CTAGE5O15320 804 aa22.01■■□□□ 1.11
ABCD4-228ENST00000557588 TLR3O15455 904 aaKnown RBP22.01■■□□□ 1.11
ABCD4-228ENST00000557588 NDUFB10O96000 172 aa22.01■■□□□ 1.11
ABCD4-228ENST00000557588 CD4P01730 458 aa22.01■■□□□ 1.11
ABCD4-228ENST00000557588 ACRP10323 421 aa22.01■■□□□ 1.11
ABCD4-228ENST00000557588 PRPF38AQ8NAV1 312 aaKnown RBP22.01■■□□□ 1.11
ABCD4-228ENST00000557588 KATNBL1Q9H079 304 aa22.01■■□□□ 1.11
ABCD4-228ENST00000557588 IL23AQ9NPF7 189 aa22.01■■□□□ 1.11
ABCD4-228ENST00000557588 SLC4A4Q9Y6R1 1079 aa22.01■■□□□ 1.11
ABCD4-228ENST00000557588 MYH4Q9Y623 1939 aa22■■□□□ 1.11
ABCD4-228ENST00000557588 CHGBP05060 677 aa22■■□□□ 1.11
ABCD4-228ENST00000557588 ATP5JP18859 108 aa22■■□□□ 1.11
ABCD4-228ENST00000557588 GNASQ5JWF2 1037 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms