RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CYBAP13498 195 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 VCAM1P19320 739 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 CYP2C19P33261 490 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 CCNA1P78396 465 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 ATP2B2Q01814 1243 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 GRB14Q14449 540 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 SHHQ15465 462 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 GJC2Q5T442 439 aaPredicted RBP7.16□□□□□ -1.26
VPS33B-207ENST00000557470 FOXP4Q8IVH2 680 aaPredicted RBP7.16□□□□□ -1.26
VPS33B-207ENST00000557470 SCUBE3Q8IX30 993 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 NPLOC4Q8TAT6 608 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 EMID1Q96A84 441 aaPredicted RBP7.16□□□□□ -1.26
VPS33B-207ENST00000557470 C12orf42Q96LP6 360 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 SEMA6BQ9H3T3 888 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 BTBD7Q9P203 1132 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 ATP11BQ9Y2G3 1177 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 FOCADQ5VW36 1801 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 CDK5RAP2Q96SN8 1893 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 MUC3AQ02505 3323 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 PNMA6EA0A0J9YXQ4 647 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L15C9J2P7 530 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L13C9JLJ4 530 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L11C9JVI0 530 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L18D6R9N7 530 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L22D6RA61 530 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L17D6RBQ6 530 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L19D6RCP7 530 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L20D6RJB6 530 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 GLRX3O76003 335 aaKnown RBP7.15□□□□□ -1.26
VPS33B-207ENST00000557470 S1PR4O95977 384 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 CYP2E1P05181 493 aaPredicted RBP7.15□□□□□ -1.26
VPS33B-207ENST00000557470 HLA-DOAP06340 250 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 GNAI3P08754 354 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 GGCXP38435 758 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 DYNLL1P63167 89 aaKnown RBP7.15□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L24Q0WX57 530 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 ANO1Q5XXA6 986 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 LBX2Q6XYB7 198 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 CATSPERGQ6ZRH7 1159 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 MYLIPQ8WY64 445 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 BADQ92934 168 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 TTYH1Q9H313 450 aaPredicted RBP7.15□□□□□ -1.26
VPS33B-207ENST00000557470 PRDM6Q9NQX0 595 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 PRDM5Q9NQX1 630 aaPredicted RBP7.15□□□□□ -1.26
VPS33B-207ENST00000557470 IVNS1ABPQ9Y6Y0 642 aa7.15□□□□□ -1.26
VPS33B-207ENST00000557470 V9GY48 417 aaPredicted RBP7.15□□□□□ -1.26
VPS33B-207ENST00000557470 TRIM43BA6NCK2 446 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 KBTBD13C9JR72 458 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 NR1I2O75469 434 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 CT47B1P0C2W7 299 aaPredicted RBP7.14□□□□□ -1.27
VPS33B-207ENST00000557470 SMAD3P84022 425 aaKnown RBP7.14□□□□□ -1.27
VPS33B-207ENST00000557470 FUT2Q10981 343 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 RLFQ13129 1914 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 G3BP1Q13283 466 aaKnown RBP eCLIP7.14□□□□□ -1.27
VPS33B-207ENST00000557470 RAB3GAP1Q15042 981 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 TRIM60Q495X7 471 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 TTC39AQ5SRH9 613 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 TATDN1Q6P1N9 297 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 ATF7IPQ6VMQ6 1270 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 SLC39A5Q6ZMH5 540 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 SH3RF1Q7Z6J0 888 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 TRMT2AQ8IZ69 625 aaKnown RBP7.14□□□□□ -1.27
VPS33B-207ENST00000557470 ACER1Q8TDN7 264 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 TRIM43Q96BQ3 446 aaPredicted RBP7.14□□□□□ -1.27
VPS33B-207ENST00000557470 DBNDD2Q9BQY9 259 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 TMUB1Q9BVT8 246 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 KIAA1683Q9H0B3 1180 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 RPAP3Q9H6T3 665 aaPredicted RBP7.14□□□□□ -1.27
VPS33B-207ENST00000557470 PIH1D3Q9NQM4 214 aaKnown RBP7.14□□□□□ -1.27
VPS33B-207ENST00000557470 PDLIM7Q9NR12 457 aa7.14□□□□□ -1.27
VPS33B-207ENST00000557470 SEPT4O43236 478 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 GFRA3O60609 400 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 ADH1BP00325 375 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 FOSL2P15408 326 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 CYP7A1P22680 504 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 ITGB8P26012 769 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 ADORA2AP29274 412 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 GUCY1A2P33402 732 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 ZAP70P43403 619 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 RARSP54136 660 aaKnown RBP7.13□□□□□ -1.27
VPS33B-207ENST00000557470 USP14P54578 494 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 SNX17Q15036 470 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 ABCB5Q2M3G0 1257 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 TNNI3KQ59H18 835 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 CCDC158Q5M9N0 1113 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 OLFML2BQ68BL8 750 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 Q6ZNB5 142 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 DPP9Q86TI2 863 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 MIGA1Q8NAN2 632 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 ARRDC4Q8NCT1 418 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 FERMT2Q96AC1 680 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 MOV10L1Q9BXT6 1211 aaKnown RBP7.13□□□□□ -1.27
VPS33B-207ENST00000557470 EHD4Q9H223 541 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 SERPINB13Q9UIV8 391 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 FPGT-TNNI3KV9GXZ4 949 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 ZNF236Q9UL36 1845 aa7.13□□□□□ -1.27
VPS33B-207ENST00000557470 CHD9Q3L8U1 2897 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 COBLO75128 1261 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 IDH1O75874 414 aaKnown RBP7.12□□□□□ -1.27
VPS33B-207ENST00000557470 GNAI2P04899 355 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms