RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 HDAC9Q9UKV0 1011 aa6.38□□□□□ -1.39
SCFD1-223ENST00000557076 HIF3AQ9Y2N7 669 aa6.38□□□□□ -1.39
SCFD1-223ENST00000557076 LTBP1Q14766 1721 aa6.38□□□□□ -1.39
SCFD1-223ENST00000557076 CENPFP49454 3210 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 SNED1Q8TER0 1413 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 CDHR2Q9BYE9 1310 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 BTBD11A6QL63 1104 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 H7C1D1 291 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 ZBTB39O15060 712 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 TXKP42681 527 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 GP2P55259 537 aaKnown RBP6.37□□□□□ -1.39
SCFD1-223ENST00000557076 INTS3Q68E01 1043 aaKnown RBP6.37□□□□□ -1.39
SCFD1-223ENST00000557076 XKR5Q6UX68 686 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 ADAMTSL4Q6UY14 1074 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-223ENST00000557076 CLEC10AQ8IUN9 316 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 TRIM42Q8IWZ5 723 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 FAM20CQ8IXL6 584 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 SLC17A8Q8NDX2 589 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 KLHDC7BQ96G42 594 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 FMNL2Q96PY5 1086 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 CRAMP1Q96RY5 1269 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 RNF208Q9H0X6 261 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 SH2B1Q9NRF2 756 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-223ENST00000557076 TMEM63CQ9P1W3 806 aa6.37□□□□□ -1.39
SCFD1-223ENST00000557076 CNOT7Q9UIV1 285 aaKnown RBP6.37□□□□□ -1.39
SCFD1-223ENST00000557076 NIP7Q9Y221 180 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCFD1-223ENST00000557076 RANBP2P49792 3224 aaKnown RBP6.37□□□□□ -1.39
SCFD1-223ENST00000557076 NPC1L1Q9UHC9 1359 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 HEG1Q9ULI3 1381 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 KIAA0100Q14667 2235 aaKnown RBP6.36□□□□□ -1.39
SCFD1-223ENST00000557076 KIF7Q2M1P5 1343 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 HMX2A2RU54 273 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 PPIP5K2O43314 1243 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 ADAM11O75078 769 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 MED26O95402 600 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 PCSK2P16519 638 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 SPINK2P20155 84 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 MTHFSDQ2M296 383 aaKnown RBP6.36□□□□□ -1.39
SCFD1-223ENST00000557076 KRT26Q7Z3Y9 468 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 SUPT20HQ8NEM7 779 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 UBASH3BQ8TF42 649 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 ZNF296Q8WUU4 475 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-223ENST00000557076 DPF2Q92785 391 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 PMEPA1Q969W9 287 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 FAM83CQ9BQN1 747 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 BCL2L13Q9BXK5 485 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 RTFDC1Q9BY42 306 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-223ENST00000557076 TMX4Q9H1E5 349 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-223ENST00000557076 KANSL3Q9P2N6 904 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 SALL4Q9UJQ4 1053 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 USP16Q9Y5T5 823 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 TRIOBPQ9H2D6 2365 aa6.36□□□□□ -1.39
SCFD1-223ENST00000557076 HTTP42858 3142 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 ANKRD31Q8N7Z5 1873 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 DDX3YO15523 660 aaKnown RBP6.35□□□□□ -1.39
SCFD1-223ENST00000557076 TM4SF4P48230 202 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 ARL4DP49703 201 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 AOC3Q16853 763 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 DLK2Q6UY11 383 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 DTX1Q86Y01 620 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 IL17REQ8NFR9 667 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 RPGRQ92834 1020 aaKnown RBP6.35□□□□□ -1.39
SCFD1-223ENST00000557076 PBXIP1Q96AQ6 731 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 RBM17Q96I25 401 aaKnown RBP6.35□□□□□ -1.39
SCFD1-223ENST00000557076 NYXQ9GZU5 481 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 OAS3Q9Y6K5 1087 aaKnown RBP6.35□□□□□ -1.39
SCFD1-223ENST00000557076 TJP1Q07157 1748 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 CEP290O15078 2479 aa6.35□□□□□ -1.39
SCFD1-223ENST00000557076 PRR19A6NJB7 356 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 BBOX1O75936 387 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 TBC1D8O95759 1140 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 BMP3P12645 472 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 CES1P23141 567 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 ATP2B4P23634 1241 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 PREPP48147 710 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 FKBP1BP68106 108 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 TEFQ10587 303 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 FDX2Q6P4F2 183 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 BEND4Q6ZU67 534 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 TTC16Q8NEE8 873 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 DCPSQ96C86 337 aaKnown RBP6.34□□□□□ -1.39
SCFD1-223ENST00000557076 RUSC1Q9BVN2 902 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 ZMYND15Q9H091 742 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 KCNF1Q9H3M0 494 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 DZANK1Q9NVP4 752 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 CNTN3Q9P232 1028 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 ATP6V0A2Q9Y487 856 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 TRPM7Q96QT4 1865 aa6.34□□□□□ -1.39
SCFD1-223ENST00000557076 BRCA2P51587 3418 aa6.33□□□□□ -1.4
SCFD1-223ENST00000557076 ERVV-1B6SEH8 477 aa6.33□□□□□ -1.4
SCFD1-223ENST00000557076 PDE2AO00408 941 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-223ENST00000557076 RAD17O75943 681 aa6.33□□□□□ -1.4
SCFD1-223ENST00000557076 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
SCFD1-223ENST00000557076 TAL1P17542 331 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-223ENST00000557076 KIAA2012Q0VF49 1180 aa6.33□□□□□ -1.4
SCFD1-223ENST00000557076 HLFQ16534 295 aa6.33□□□□□ -1.4
SCFD1-223ENST00000557076 MORC1Q86VD1 984 aa6.33□□□□□ -1.4
SCFD1-223ENST00000557076 SHKBP1Q8TBC3 707 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms