RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ST13P50502 369 aaKnown RBP6.63□□□□□ -1.35
ATXN3-243ENST00000556671 MSH6P52701 1360 aa6.63□□□□□ -1.35
ATXN3-243ENST00000556671 DAB2P98082 770 aa6.63□□□□□ -1.35
ATXN3-243ENST00000556671 FZD5Q13467 585 aa6.63□□□□□ -1.35
ATXN3-243ENST00000556671 DNAJC14Q6Y2X3 702 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-243ENST00000556671 WAPLQ7Z5K2 1190 aa6.63□□□□□ -1.35
ATXN3-243ENST00000556671 MRPL41Q8IXM3 137 aaKnown RBP6.63□□□□□ -1.35
ATXN3-243ENST00000556671 POGKQ9P215 609 aa6.63□□□□□ -1.35
ATXN3-243ENST00000556671 ST14Q9Y5Y6 855 aa6.63□□□□□ -1.35
ATXN3-243ENST00000556671 DIP2AQ14689 1571 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 ADAMTS13Q76LX8 1427 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 PGRP06401 933 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 RLBP1P12271 317 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 JAG1P78504 1218 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 TAF1CQ15572 869 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-243ENST00000556671 CDKAL1Q5VV42 579 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 AEBP1Q8IUX7 1158 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 COX4I2Q96KJ9 171 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 NOC4LQ9BVI4 516 aaKnown RBP6.62□□□□□ -1.35
ATXN3-243ENST00000556671 ATP13A1Q9HD20 1204 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 TJP2Q9UDY2 1190 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 CTNND2Q9UQB3 1225 aa6.62□□□□□ -1.35
ATXN3-243ENST00000556671 SETD1AO15047 1707 aaKnown RBP6.62□□□□□ -1.35
ATXN3-243ENST00000556671 SPATA31E1Q6ZUB1 1445 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 PTPRUQ92729 1446 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 DHX57Q6P158 1386 aaKnown RBP6.61□□□□□ -1.35
ATXN3-243ENST00000556671 CTSHP09668 335 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 HSPA1LP34931 641 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 RPL6Q02878 288 aaKnown RBP6.61□□□□□ -1.35
ATXN3-243ENST00000556671 PSMD2Q13200 908 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 TSNAXIP1Q2TAA8 658 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 ZNF648Q5T619 568 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-243ENST00000556671 TMC4Q7Z404 712 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 ZSWIM9Q86XI8 627 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 XAGE3Q8WTP9 111 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 C19orf44Q9H6X5 657 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 C14orf93Q9H972 538 aaKnown RBP6.61□□□□□ -1.35
ATXN3-243ENST00000556671 CARS2Q9HA77 564 aaKnown RBP6.61□□□□□ -1.35
ATXN3-243ENST00000556671 TLR6Q9Y2C9 796 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 PHLPP1O60346 1717 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 SETBP1Q9Y6X0 1596 aa6.61□□□□□ -1.35
ATXN3-243ENST00000556671 USP31Q70CQ4 1352 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 KRTAP4-8A0A0G2JLE6 195 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 H3BS24 57 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 FARP2O94887 1054 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-243ENST00000556671 PDIA4P13667 645 aaKnown RBP6.6□□□□□ -1.35
ATXN3-243ENST00000556671 CYP7A1P22680 504 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 KIR3DL1P43629 444 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 SLC6A19Q695T7 634 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 THAP5Q7Z6K1 395 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 PHC3Q8NDX5 983 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 TMEM87BQ96K49 555 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 ROBO1Q9Y6N7 1651 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 IQSEC2Q5JU85 1478 aa6.6□□□□□ -1.35
ATXN3-243ENST00000556671 NALCNQ8IZF0 1738 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 TONSLQ96HA7 1378 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 PIK3R4Q99570 1358 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 RBAK-RBAKDNI3L0D1 243 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 CBX7O95931 251 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 PDE4BQ07343 736 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 KCNMB1Q16558 191 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 FBXO33Q7Z6M2 555 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 CDH24Q86UP0 819 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 MCATQ8IVS2 390 aaKnown RBP6.59□□□□□ -1.35
ATXN3-243ENST00000556671 DPH2Q9BQC3 489 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-243ENST00000556671 HIRIP3Q9BW71 556 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-243ENST00000556671 ADAM30Q9UKF2 790 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 NWD1Q149M9 1564 aa6.59□□□□□ -1.35
ATXN3-243ENST00000556671 XRN1Q8IZH2 1706 aaKnown RBP6.59□□□□□ -1.36
ATXN3-243ENST00000556671 LAMC1P11047 1609 aa6.58□□□□□ -1.36
ATXN3-243ENST00000556671 ZNF503-AS2A6NEH8 195 aa6.58□□□□□ -1.36
ATXN3-243ENST00000556671 AFMP43652 599 aa6.58□□□□□ -1.36
ATXN3-243ENST00000556671 XPCQ01831 940 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-243ENST00000556671 TNK2Q07912 1038 aa6.58□□□□□ -1.36
ATXN3-243ENST00000556671 CCDC84Q86UT8 332 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-243ENST00000556671 JARID2Q92833 1246 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-243ENST00000556671 ACSF2Q96CM8 615 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-243ENST00000556671 FAM161BQ96MY7 647 aa6.58□□□□□ -1.36
ATXN3-243ENST00000556671 PRAM1Q96QH2 718 aa6.58□□□□□ -1.36
ATXN3-243ENST00000556671 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
ATXN3-243ENST00000556671 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.58□□□□□ -1.36
ATXN3-243ENST00000556671 NKTRP30414 1462 aaKnown RBP6.58□□□□□ -1.36
ATXN3-243ENST00000556671 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-243ENST00000556671 ETV3P41162 512 aa6.57□□□□□ -1.36
ATXN3-243ENST00000556671 FYB2Q5VWT5 728 aa6.57□□□□□ -1.36
ATXN3-243ENST00000556671 DNAJB8Q8NHS0 232 aa6.57□□□□□ -1.36
ATXN3-243ENST00000556671 PIWIL2Q8TC59 973 aaKnown RBP6.57□□□□□ -1.36
ATXN3-243ENST00000556671 DDX17Q92841 729 aaKnown RBP6.57□□□□□ -1.36
ATXN3-243ENST00000556671 UBE2FQ969M7 185 aa6.57□□□□□ -1.36
ATXN3-243ENST00000556671 CRELD1Q96HD1 420 aa6.57□□□□□ -1.36
ATXN3-243ENST00000556671 FAM53CQ9NYF3 392 aa6.57□□□□□ -1.36
ATXN3-243ENST00000556671 YTHDC2Q9H6S0 1430 aaKnown RBP6.57□□□□□ -1.36
ATXN3-243ENST00000556671 ROBO2Q9HCK4 1378 aa6.57□□□□□ -1.36
ATXN3-243ENST00000556671 KNDC1Q76NI1 1749 aa6.56□□□□□ -1.36
ATXN3-243ENST00000556671 CILPO75339 1184 aa6.56□□□□□ -1.36
ATXN3-243ENST00000556671 GDNFP39905 211 aa6.56□□□□□ -1.36
ATXN3-243ENST00000556671 MESP2Q0VG99 397 aa6.56□□□□□ -1.36
ATXN3-243ENST00000556671 BNC2Q6ZN30 1099 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-243ENST00000556671 Q96M66 194 aa6.56□□□□□ -1.36
ATXN3-243ENST00000556671 ORAI2Q96SN7 254 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms